RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 WDR62O43379 1518 aa16.46■□□□□ 0.23
SMARCA4-214ENST00000589677 RPAINQ86UA6 219 aa16.46■□□□□ 0.23
SMARCA4-214ENST00000589677 SEC62Q99442 399 aaKnown RBP16.46■□□□□ 0.23
SMARCA4-214ENST00000589677 LRMPQ12912 555 aa16.46■□□□□ 0.22
SMARCA4-214ENST00000589677 CFAP43Q8NDM7 1665 aa16.45■□□□□ 0.22
SMARCA4-214ENST00000589677 GCKP35557 465 aa16.45■□□□□ 0.22
SMARCA4-214ENST00000589677 NAA16Q6N069 864 aaPredicted RBP16.45■□□□□ 0.22
SMARCA4-214ENST00000589677 CNKSR2Q8WXI2 1034 aa16.45■□□□□ 0.22
SMARCA4-214ENST00000589677 XPO4Q9C0E2 1151 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-214ENST00000589677 ZRANB1Q9UGI0 708 aa16.45■□□□□ 0.22
SMARCA4-214ENST00000589677 NOS1P29475 1434 aa16.45■□□□□ 0.22
SMARCA4-214ENST00000589677 KIF3CO14782 793 aa16.45■□□□□ 0.22
SMARCA4-214ENST00000589677 TSPYL6Q8N831 410 aa16.45■□□□□ 0.22
SMARCA4-214ENST00000589677 SREK1Q8WXA9 508 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-214ENST00000589677 CCDC51Q96ER9 411 aa16.45■□□□□ 0.22
SMARCA4-214ENST00000589677 SGSM2O43147 1006 aa16.45■□□□□ 0.22
SMARCA4-214ENST00000589677 ACTN2P35609 894 aa16.45■□□□□ 0.22
SMARCA4-214ENST00000589677 SND1Q7KZF4 910 aaKnown RBP eCLIP16.45■□□□□ 0.22
SMARCA4-214ENST00000589677 PNMA8AQ86V59 439 aaPredicted RBP16.45■□□□□ 0.22
SMARCA4-214ENST00000589677 SNRKQ9NRH2 765 aa16.45■□□□□ 0.22
SMARCA4-214ENST00000589677 RABGGTAQ92696 567 aa16.45■□□□□ 0.22
SMARCA4-214ENST00000589677 SECISBP2LQ93073 1101 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-214ENST00000589677 NAP1L3Q99457 506 aaPredicted RBP16.45■□□□□ 0.22
SMARCA4-214ENST00000589677 NUP58Q9BVL2 599 aa16.45■□□□□ 0.22
SMARCA4-214ENST00000589677 WASLO00401 505 aaPredicted RBP16.44■□□□□ 0.22
SMARCA4-214ENST00000589677 STARD3NLO95772 234 aa16.44■□□□□ 0.22
SMARCA4-214ENST00000589677 UQCRFS1P1P0C7P4 283 aa16.44■□□□□ 0.22
SMARCA4-214ENST00000589677 CPA1P15085 419 aa16.44■□□□□ 0.22
SMARCA4-214ENST00000589677 AP1ARQ63HQ0 302 aa16.44■□□□□ 0.22
SMARCA4-214ENST00000589677 KAT14Q9H8E8 782 aa16.44■□□□□ 0.22
SMARCA4-214ENST00000589677 KCNH3Q9ULD8 1083 aa16.44■□□□□ 0.22
SMARCA4-214ENST00000589677 TTC21AQ8NDW8 1320 aa16.44■□□□□ 0.22
SMARCA4-214ENST00000589677 GNGT1P63211 74 aa16.44■□□□□ 0.22
SMARCA4-214ENST00000589677 SSH2Q76I76 1423 aa16.44■□□□□ 0.22
SMARCA4-214ENST00000589677 SMIM23A6NLE4 172 aa16.44■□□□□ 0.22
SMARCA4-214ENST00000589677 CALCOCO2Q13137 446 aa16.44■□□□□ 0.22
SMARCA4-214ENST00000589677 WAPLQ7Z5K2 1190 aa16.44■□□□□ 0.22
SMARCA4-214ENST00000589677 CFAP57Q96MR6 1250 aa16.44■□□□□ 0.22
SMARCA4-214ENST00000589677 TSKSQ9UJT2 592 aa16.44■□□□□ 0.22
SMARCA4-214ENST00000589677 COL17A1Q9UMD9 1497 aaPredicted RBP16.44■□□□□ 0.22
SMARCA4-214ENST00000589677 ZNF202O95125 648 aa16.44■□□□□ 0.22
SMARCA4-214ENST00000589677 MTMR3Q13615 1198 aa16.44■□□□□ 0.22
SMARCA4-214ENST00000589677 CCDC38Q502W7 563 aa16.44■□□□□ 0.22
SMARCA4-214ENST00000589677 CUTAO60888 179 aa16.43■□□□□ 0.22
SMARCA4-214ENST00000589677 SH3BGRP55822 239 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-214ENST00000589677 PDE4BQ07343 736 aa16.43■□□□□ 0.22
SMARCA4-214ENST00000589677 TM6SF1Q9BZW5 370 aa16.43■□□□□ 0.22
SMARCA4-214ENST00000589677 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.43■□□□□ 0.222e-8■■■□□ 16.1
SMARCA4-214ENST00000589677 SLC27A2O14975 620 aa16.43■□□□□ 0.22
SMARCA4-214ENST00000589677 OTUD7AQ8TE49 926 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-214ENST00000589677 CAPS2Q9BXY5 557 aa16.43■□□□□ 0.22
SMARCA4-214ENST00000589677 E7EVH7 732 aa16.43■□□□□ 0.22
SMARCA4-214ENST00000589677 CIB2O75838 187 aa16.43■□□□□ 0.22
SMARCA4-214ENST00000589677 MTX1Q13505 466 aa16.43■□□□□ 0.22
SMARCA4-214ENST00000589677 MIPOL1Q8TD10 442 aa16.43■□□□□ 0.22
SMARCA4-214ENST00000589677 ESR2Q92731 530 aa16.43■□□□□ 0.22
SMARCA4-214ENST00000589677 CCT6AP40227 531 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-214ENST00000589677 LIG3P49916 1009 aa16.43■□□□□ 0.22
SMARCA4-214ENST00000589677 RILPL1Q5EBL4 403 aa16.43■□□□□ 0.22
SMARCA4-214ENST00000589677 FAM173BQ6P4H8 233 aa16.43■□□□□ 0.22
SMARCA4-214ENST00000589677 FCHSD1Q86WN1 690 aa16.43■□□□□ 0.22
SMARCA4-214ENST00000589677 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.43■□□□□ 0.22
SMARCA4-214ENST00000589677 BAIAP2L1Q9UHR4 511 aa16.43■□□□□ 0.22
SMARCA4-214ENST00000589677 ASXL2Q76L83 1435 aa16.43■□□□□ 0.22
SMARCA4-214ENST00000589677 GRM8O00222 908 aa16.42■□□□□ 0.22
SMARCA4-214ENST00000589677 KRT2P35908 639 aa16.42■□□□□ 0.22
SMARCA4-214ENST00000589677 FBXO31Q5XUX0 539 aaPredicted RBP16.42■□□□□ 0.22
SMARCA4-214ENST00000589677 UBE3BQ7Z3V4 1068 aa16.42■□□□□ 0.22
SMARCA4-214ENST00000589677 EXOC4Q96A65 974 aa16.42■□□□□ 0.22
SMARCA4-214ENST00000589677 RABEP2Q9H5N1 569 aa16.42■□□□□ 0.22
SMARCA4-214ENST00000589677 CWC25Q9NXE8 425 aaPredicted RBP16.42■□□□□ 0.22
SMARCA4-214ENST00000589677 A0A087WUV0 522 aaPredicted RBP16.42■□□□□ 0.22
SMARCA4-214ENST00000589677 FERP16591 822 aa16.42■□□□□ 0.22
SMARCA4-214ENST00000589677 MTUS1Q9ULD2 1270 aa16.42■□□□□ 0.22
SMARCA4-214ENST00000589677 KIF24Q5T7B8 1368 aa16.42■□□□□ 0.22
SMARCA4-214ENST00000589677 ACTN4O43707 911 aaKnown RBP16.42■□□□□ 0.22
SMARCA4-214ENST00000589677 CDC37L1Q7L3B6 337 aa16.42■□□□□ 0.22
SMARCA4-214ENST00000589677 PAG1Q9NWQ8 432 aa16.42■□□□□ 0.22
SMARCA4-214ENST00000589677 RNF113AO15541 343 aaKnown RBP16.42■□□□□ 0.22
SMARCA4-214ENST00000589677 MPRIPQ6WCQ1 1025 aa16.42■□□□□ 0.22
SMARCA4-214ENST00000589677 SYCP2Q9BX26 1530 aa16.42■□□□□ 0.22
SMARCA4-214ENST00000589677 MSH6P52701 1360 aa16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 CALML3P27482 149 aa16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 TERF2Q15554 542 aa16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 BCAS4Q8TDM0 211 aa16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 NOX5Q96PH1 765 aa16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 JRKLQ9Y4A0 524 aa16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 SYNRGQ9UMZ2 1314 aa16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 NOL3O60936 208 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 TAOK1Q7L7X3 1001 aa16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 PAF1Q8N7H5 531 aa16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 VEZTQ9HBM0 779 aa16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 PPP2R2CQ9Y2T4 447 aa16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 TBCAO75347 108 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 CALM1P0DP23 149 aa16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 CALM2P0DP24 149 aa16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 CALM3P0DP25 149 aa16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 TDRD7Q8NHU6 1098 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 CCDC110Q8TBZ0 833 aa16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 PPP1R12CQ9BZL4 782 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms