RNA–Protein interactions for RNA: ENST00000589675.5

DDX39A-210, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-210ENST00000589675 TNRC18O15417 2968 aaPredicted RBP13.95□□□□□ -0.18
DDX39A-210ENST00000589675 ZBTB22O15209 634 aa13.94□□□□□ -0.18
DDX39A-210ENST00000589675 FRAT2O75474 233 aaPredicted RBP13.94□□□□□ -0.18
DDX39A-210ENST00000589675 USP2O75604 605 aaPredicted RBP13.94□□□□□ -0.18
DDX39A-210ENST00000589675 CIAO1O76071 339 aa13.94□□□□□ -0.18
DDX39A-210ENST00000589675 UBTFL1P0CB47 393 aaPredicted RBP13.94□□□□□ -0.18
DDX39A-210ENST00000589675 CRKP46108 304 aa13.94□□□□□ -0.18
DDX39A-210ENST00000589675 BCAMP50895 628 aa13.94□□□□□ -0.18
DDX39A-210ENST00000589675 RARSP54136 660 aaKnown RBP13.94□□□□□ -0.18
DDX39A-210ENST00000589675 NBPF12Q5TAG4 269 aaPredicted RBP13.94□□□□□ -0.18
DDX39A-210ENST00000589675 ATG9AQ7Z3C6 839 aa13.94□□□□□ -0.18
DDX39A-210ENST00000589675 LPIN2Q92539 896 aa13.94□□□□□ -0.18
DDX39A-210ENST00000589675 TDRD3Q9H7E2 651 aaKnown RBP13.94□□□□□ -0.18
DDX39A-210ENST00000589675 MANSC4A6NHS7 340 aaPredicted RBP13.93□□□□□ -0.18
DDX39A-210ENST00000589675 ALDH1A1P00352 501 aa13.93□□□□□ -0.18
DDX39A-210ENST00000589675 IREB2P48200 963 aaKnown RBP13.93□□□□□ -0.18
DDX39A-210ENST00000589675 CTU1Q7Z7A3 348 aaKnown RBP13.93□□□□□ -0.18
DDX39A-210ENST00000589675 TEPSINQ96N21 525 aa13.93□□□□□ -0.18
DDX39A-210ENST00000589675 IQSEC3Q9UPP2 1182 aaPredicted RBP13.93□□□□□ -0.18
DDX39A-210ENST00000589675 MAST3O60307 1309 aa13.92□□□□□ -0.18
DDX39A-210ENST00000589675 TBC1D8O95759 1140 aa13.92□□□□□ -0.18
DDX39A-210ENST00000589675 SLC5A1P13866 664 aa13.92□□□□□ -0.18
DDX39A-210ENST00000589675 TNNI2P48788 182 aa13.92□□□□□ -0.18
DDX39A-210ENST00000589675 GRIK5Q16478 980 aa13.92□□□□□ -0.18
DDX39A-210ENST00000589675 PKN2Q16513 984 aaKnown RBP13.92□□□□□ -0.18
DDX39A-210ENST00000589675 FKBP1CQ5VVH2 108 aa13.92□□□□□ -0.18
DDX39A-210ENST00000589675 INTS3Q68E01 1043 aaKnown RBP13.92□□□□□ -0.18
DDX39A-210ENST00000589675 ANKRD13AQ8IZ07 590 aa13.92□□□□□ -0.18
DDX39A-210ENST00000589675 TEKT1Q969V4 418 aa13.92□□□□□ -0.18
DDX39A-210ENST00000589675 WNK4Q96J92 1243 aa13.92□□□□□ -0.18
DDX39A-210ENST00000589675 ZDHHC15Q96MV8 337 aa13.92□□□□□ -0.18
DDX39A-210ENST00000589675 FZD1Q9UP38 647 aa13.92□□□□□ -0.18
DDX39A-210ENST00000589675 OTOFQ9HC10 1997 aa13.91□□□□□ -0.18
DDX39A-210ENST00000589675 GPR25O00155 361 aa13.91□□□□□ -0.18
DDX39A-210ENST00000589675 MKRN3Q13064 507 aaKnown RBP13.91□□□□□ -0.18
DDX39A-210ENST00000589675 CHAF1AQ13111 956 aaPredicted RBP13.91□□□□□ -0.18
DDX39A-210ENST00000589675 HHIPL2Q6UWX4 724 aa13.91□□□□□ -0.18
DDX39A-210ENST00000589675 WDR66Q8TBY9 1149 aa13.91□□□□□ -0.18
DDX39A-210ENST00000589675 ZNF296Q8WUU4 475 aaPredicted RBP13.91□□□□□ -0.18
DDX39A-210ENST00000589675 CLMNQ96JQ2 1002 aa13.91□□□□□ -0.18
DDX39A-210ENST00000589675 COPRSQ9NQ92 184 aa13.91□□□□□ -0.18
DDX39A-210ENST00000589675 IL15P40933 162 aaPredicted RBP13.9□□□□□ -0.18
DDX39A-210ENST00000589675 FAM83AQ86UY5 434 aa13.9□□□□□ -0.18
DDX39A-210ENST00000589675 IFNL1Q8IU54 200 aa13.9□□□□□ -0.18
DDX39A-210ENST00000589675 CEP126Q9P2H0 1117 aa13.9□□□□□ -0.18
DDX39A-210ENST00000589675 LRRFIP2Q9Y608 721 aaKnown RBP13.9□□□□□ -0.18
DDX39A-210ENST00000589675 HTTP42858 3142 aa13.89□□□□□ -0.19
DDX39A-210ENST00000589675 TESPA1A2RU30 521 aaPredicted RBP13.89□□□□□ -0.19
DDX39A-210ENST00000589675 TCP10L2B9ZVM9 353 aa13.89□□□□□ -0.19
DDX39A-210ENST00000589675 IPO8O15397 1037 aaKnown RBP13.89□□□□□ -0.19
DDX39A-210ENST00000589675 GNAI3P08754 354 aa13.89□□□□□ -0.19
DDX39A-210ENST00000589675 MLLT1Q03111 559 aaPredicted RBP13.89□□□□□ -0.19
DDX39A-210ENST00000589675 ATP2B3Q16720 1220 aa13.89□□□□□ -0.19
DDX39A-210ENST00000589675 APOBEC3HQ6NTF7 200 aaKnown RBP13.89□□□□□ -0.19
DDX39A-210ENST00000589675 GNL3LQ9NVN8 582 aaKnown RBP13.89□□□□□ -0.19
DDX39A-210ENST00000589675 SEMA3EO15041 775 aa13.88□□□□□ -0.19
DDX39A-210ENST00000589675 FKTNO75072 461 aa13.88□□□□□ -0.19
DDX39A-210ENST00000589675 MTX1Q13505 466 aa13.88□□□□□ -0.19
DDX39A-210ENST00000589675 OTUD7BQ6GQQ9 843 aa13.88□□□□□ -0.19
DDX39A-210ENST00000589675 HOOK2Q96ED9 719 aa13.88□□□□□ -0.19
DDX39A-210ENST00000589675 MEIS3Q99687 375 aa13.88□□□□□ -0.19
DDX39A-210ENST00000589675 TMEM39BQ9GZU3 492 aa13.88□□□□□ -0.19
DDX39A-210ENST00000589675 SIL1Q9H173 461 aa13.88□□□□□ -0.19
DDX39A-210ENST00000589675 SALL1Q9NSC2 1324 aa13.88□□□□□ -0.19
DDX39A-210ENST00000589675 RPAP1Q9BWH6 1393 aaPredicted RBP13.87□□□□□ -0.19
DDX39A-210ENST00000589675 IGF2BP3O00425 579 aaKnown RBP eCLIP13.87□□□□□ -0.19
DDX39A-210ENST00000589675 GJA5P36382 358 aa13.87□□□□□ -0.19
DDX39A-210ENST00000589675 MAP3K9P80192 1104 aa13.87□□□□□ -0.19
DDX39A-210ENST00000589675 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.87□□□□□ -0.19
DDX39A-210ENST00000589675 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.87□□□□□ -0.19
DDX39A-210ENST00000589675 R3HDMLQ9H3Y0 253 aa13.87□□□□□ -0.19
DDX39A-210ENST00000589675 TMOD2Q9NZR1 351 aa13.87□□□□□ -0.19
DDX39A-210ENST00000589675 CENPFP49454 3210 aa13.86□□□□□ -0.19
DDX39A-210ENST00000589675 CDAN1Q8IWY9 1227 aa13.86□□□□□ -0.19
DDX39A-210ENST00000589675 OPTNQ96CV9 577 aa13.86□□□□□ -0.19
DDX39A-210ENST00000589675 MS4A4AQ96JQ5 239 aa13.86□□□□□ -0.19
DDX39A-210ENST00000589675 DENND2AQ9ULE3 1009 aa13.86□□□□□ -0.19
DDX39A-210ENST00000589675 PDE4DIPQ5VU43 2346 aa13.86□□□□□ -0.19
DDX39A-210ENST00000589675 TRIM27P14373 513 aa13.85□□□□□ -0.19
DDX39A-210ENST00000589675 CACNB3P54284 484 aa13.85□□□□□ -0.19
DDX39A-210ENST00000589675 VGLL4Q14135 290 aa13.85□□□□□ -0.19
DDX39A-210ENST00000589675 FBXO46Q6PJ61 603 aaPredicted RBP13.85□□□□□ -0.19
DDX39A-210ENST00000589675 ATF7IPQ6VMQ6 1270 aa13.85□□□□□ -0.19
DDX39A-210ENST00000589675 PTPN18Q99952 460 aa13.85□□□□□ -0.19
DDX39A-210ENST00000589675 ELP3Q9H9T3 547 aa13.85□□□□□ -0.19
DDX39A-210ENST00000589675 HPS5Q9UPZ3 1129 aa13.85□□□□□ -0.19
DDX39A-210ENST00000589675 PA2G4Q9UQ80 394 aaKnown RBP13.85□□□□□ -0.19
DDX39A-210ENST00000589675 CSADQ9Y600 493 aa13.85□□□□□ -0.19
DDX39A-210ENST00000589675 AK9Q5TCS8 1911 aa13.85□□□□□ -0.19
DDX39A-210ENST00000589675 MYH2Q9UKX2 1941 aa13.85□□□□□ -0.19
DDX39A-210ENST00000589675 PDS5AQ29RF7 1337 aaKnown RBP13.85□□□□□ -0.19
DDX39A-210ENST00000589675 SRGAP3O43295 1099 aa13.84□□□□□ -0.19
DDX39A-210ENST00000589675 LDHBP07195 334 aaKnown RBP13.84□□□□□ -0.19
DDX39A-210ENST00000589675 PHKA1P46020 1223 aa13.84□□□□□ -0.19
DDX39A-210ENST00000589675 GTF2A2P52657 109 aa13.84□□□□□ -0.19
DDX39A-210ENST00000589675 ZGPATQ8N5A5 531 aaKnown RBP13.84□□□□□ -0.19
DDX39A-210ENST00000589675 FAM151AQ8WW52 585 aa13.84□□□□□ -0.19
DDX39A-210ENST00000589675 AKAP2Q9Y2D5 859 aa13.84□□□□□ -0.19
DDX39A-210ENST00000589675 DAGLAQ9Y4D2 1042 aa13.84□□□□□ -0.19
DDX39A-210ENST00000589675 SPDYE5A6NIY4 337 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms