RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 DZIP1LQ8IYY4 767 aaKnown RBP23.29■■□□□ 1.32
CCDC43-204ENST00000588687 ANKRD44Q8N8A2 993 aa23.29■■□□□ 1.32
CCDC43-204ENST00000588687 BICC1Q9H694 974 aaKnown RBP23.29■■□□□ 1.32
CCDC43-204ENST00000588687 TRIM17Q9Y577 477 aa23.29■■□□□ 1.32
CCDC43-204ENST00000588687 ANP32CO43423 234 aa23.28■■□□□ 1.32
CCDC43-204ENST00000588687 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.28■■□□□ 1.32
CCDC43-204ENST00000588687 FBXO33Q7Z6M2 555 aa23.28■■□□□ 1.32
CCDC43-204ENST00000588687 MS4A4AQ96JQ5 239 aa23.28■■□□□ 1.32
CCDC43-204ENST00000588687 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.28■■□□□ 1.32
CCDC43-204ENST00000588687 MROH5Q6ZUA9 1318 aa23.28■■□□□ 1.32
CCDC43-204ENST00000588687 CRKP46108 304 aa23.27■■□□□ 1.32
CCDC43-204ENST00000588687 LRRC24Q50LG9 513 aa23.26■■□□□ 1.31
CCDC43-204ENST00000588687 CNKSR2Q8WXI2 1034 aa23.26■■□□□ 1.31
CCDC43-204ENST00000588687 OPTNQ96CV9 577 aa23.26■■□□□ 1.31
CCDC43-204ENST00000588687 TMEM39BQ9GZU3 492 aa23.26■■□□□ 1.31
CCDC43-204ENST00000588687 ELP3Q9H9T3 547 aa23.26■■□□□ 1.31
CCDC43-204ENST00000588687 KIAA0100Q14667 2235 aaKnown RBP23.26■■□□□ 1.31
CCDC43-204ENST00000588687 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.25■■□□□ 1.31
CCDC43-204ENST00000588687 CD99L2Q8TCZ2 262 aa23.25■■□□□ 1.31
CCDC43-204ENST00000588687 MYH13Q9UKX3 1938 aa23.24■■□□□ 1.31
CCDC43-204ENST00000588687 VGLL4Q14135 290 aa23.24■■□□□ 1.31
CCDC43-204ENST00000588687 MRPL50Q8N5N7 158 aaKnown RBP23.24■■□□□ 1.31
CCDC43-204ENST00000588687 BRI3BPQ8WY22 251 aa23.24■■□□□ 1.31
CCDC43-204ENST00000588687 ERO1AQ96HE7 468 aa23.24■■□□□ 1.31
CCDC43-204ENST00000588687 IQSEC3Q9UPP2 1182 aaPredicted RBP23.24■■□□□ 1.31
CCDC43-204ENST00000588687 PTPN22Q9Y2R2 807 aa23.24■■□□□ 1.31
CCDC43-204ENST00000588687 POTEFA5A3E0 1075 aa23.23■■□□□ 1.31
CCDC43-204ENST00000588687 TCP10L2B9ZVM9 353 aa23.23■■□□□ 1.31
CCDC43-204ENST00000588687 ZSWIM8A7E2V4 1837 aa23.23■■□□□ 1.31
CCDC43-204ENST00000588687 HDLBPQ00341 1268 aaKnown RBP23.22■■□□□ 1.31
CCDC43-204ENST00000588687 ARMC5Q96C12 935 aa23.22■■□□□ 1.31
CCDC43-204ENST00000588687 PCDH10Q9P2E7 1040 aa23.22■■□□□ 1.31
CCDC43-204ENST00000588687 PDE8BO95263 885 aa23.21■■□□□ 1.31
CCDC43-204ENST00000588687 OTUD7BQ6GQQ9 843 aa23.21■■□□□ 1.31
CCDC43-204ENST00000588687 FAM9BQ8IZU0 186 aa23.21■■□□□ 1.31
CCDC43-204ENST00000588687 KIF16BQ96L93 1317 aa23.21■■□□□ 1.31
CCDC43-204ENST00000588687 RPAP1Q9BWH6 1393 aaPredicted RBP23.2■■□□□ 1.3
CCDC43-204ENST00000588687 FGFR2P21802 821 aa23.2■■□□□ 1.3
CCDC43-204ENST00000588687 CACNB3P54284 484 aa23.2■■□□□ 1.3
CCDC43-204ENST00000588687 SP3Q02447 781 aa23.2■■□□□ 1.3
CCDC43-204ENST00000588687 CHAF1AQ13111 956 aaPredicted RBP23.2■■□□□ 1.3
CCDC43-204ENST00000588687 METTL24Q5JXM2 366 aa23.2■■□□□ 1.3
CCDC43-204ENST00000588687 INTS3Q68E01 1043 aaKnown RBP23.2■■□□□ 1.3
CCDC43-204ENST00000588687 KLHDC4Q8TBB5 520 aa23.2■■□□□ 1.3
CCDC43-204ENST00000588687 TBC1D22AQ8WUA7 517 aa23.2■■□□□ 1.3
CCDC43-204ENST00000588687 SNCAIPQ9Y6H5 919 aa23.2■■□□□ 1.3
CCDC43-204ENST00000588687 PTPRCP08575 1304 aa23.19■■□□□ 1.3
CCDC43-204ENST00000588687 ZDHHC15Q96MV8 337 aa23.19■■□□□ 1.3
CCDC43-204ENST00000588687 USP44Q9H0E7 712 aa23.19■■□□□ 1.3
CCDC43-204ENST00000588687 CCL15-CCL14A0A0B4J2E2 113 aa23.18■■□□□ 1.3
CCDC43-204ENST00000588687 SPDYE5A6NIY4 337 aa23.18■■□□□ 1.3
CCDC43-204ENST00000588687 TNNI2P48788 182 aa23.18■■□□□ 1.3
CCDC43-204ENST00000588687 BCAMP50895 628 aa23.18■■□□□ 1.3
CCDC43-204ENST00000588687 MAP3K9P80192 1104 aa23.18■■□□□ 1.3
CCDC43-204ENST00000588687 CCL15Q16663 113 aa23.18■■□□□ 1.3
CCDC43-204ENST00000588687 APOBEC3HQ6NTF7 200 aaKnown RBP23.18■■□□□ 1.3
CCDC43-204ENST00000588687 VPS37DQ86XT2 251 aa23.18■■□□□ 1.3
CCDC43-204ENST00000588687 FAM43AQ8N2R8 423 aa23.18■■□□□ 1.3
CCDC43-204ENST00000588687 TEKT1Q969V4 418 aa23.18■■□□□ 1.3
CCDC43-204ENST00000588687 EFCC1Q9HA90 598 aa23.18■■□□□ 1.3
CCDC43-204ENST00000588687 ZNF316A6NFI3 1004 aaPredicted RBP23.17■■□□□ 1.3
CCDC43-204ENST00000588687 RFX5P48382 616 aaPredicted RBP23.17■■□□□ 1.3
CCDC43-204ENST00000588687 CAVIN4Q5BKX8 364 aa23.17■■□□□ 1.3
CCDC43-204ENST00000588687 OTUD5Q96G74 571 aa23.17■■□□□ 1.3
CCDC43-204ENST00000588687 MRIQ9BWK5 157 aa23.17■■□□□ 1.3
CCDC43-204ENST00000588687 GTF2A2P52657 109 aa23.16■■□□□ 1.3
CCDC43-204ENST00000588687 FKBP1CQ5VVH2 108 aa23.16■■□□□ 1.3
CCDC43-204ENST00000588687 FAM83AQ86UY5 434 aa23.16■■□□□ 1.3
CCDC43-204ENST00000588687 SSH1Q8WYL5 1049 aa23.16■■□□□ 1.3
CCDC43-204ENST00000588687 PUM3Q15397 648 aaKnown RBP23.15■■□□□ 1.3
CCDC43-204ENST00000588687 TAF1CQ15572 869 aaPredicted RBP23.15■■□□□ 1.3
CCDC43-204ENST00000588687 SUGT1Q9Y2Z0 365 aa23.15■■□□□ 1.3
CCDC43-204ENST00000588687 CSADQ9Y600 493 aa23.15■■□□□ 1.3
CCDC43-204ENST00000588687 ZNF333Q96JL9 665 aa23.14■■□□□ 1.29
CCDC43-204ENST00000588687 MAST3O60307 1309 aa23.13■■□□□ 1.29
CCDC43-204ENST00000588687 WRNIP1Q96S55 665 aa23.13■■□□□ 1.29
CCDC43-204ENST00000588687 HHIPL2Q6UWX4 724 aa23.12■■□□□ 1.29
CCDC43-204ENST00000588687 ATG9AQ7Z3C6 839 aa23.12■■□□□ 1.29
CCDC43-204ENST00000588687 ERO1BQ86YB8 467 aa23.12■■□□□ 1.29
CCDC43-204ENST00000588687 ZKSCAN4Q969J2 545 aaPredicted RBP23.12■■□□□ 1.29
CCDC43-204ENST00000588687 ZFYVE28Q9HCC9 887 aa23.12■■□□□ 1.29
CCDC43-204ENST00000588687 PTCH2Q9Y6C5 1203 aa23.12■■□□□ 1.29
CCDC43-204ENST00000588687 EYA2O00167 538 aa23.11■■□□□ 1.29
CCDC43-204ENST00000588687 IRF6O14896 467 aa23.11■■□□□ 1.29
CCDC43-204ENST00000588687 FRAT2O75474 233 aaPredicted RBP23.11■■□□□ 1.29
CCDC43-204ENST00000588687 ZCCHC17Q9NP64 241 aaKnown RBP23.11■■□□□ 1.29
CCDC43-204ENST00000588687 BTBD19C9JJ37 291 aa23.1■■□□□ 1.29
CCDC43-204ENST00000588687 E9PSI1 815 aa23.1■■□□□ 1.29
CCDC43-204ENST00000588687 IFIT1P09914 478 aaKnown RBP23.1■■□□□ 1.29
CCDC43-204ENST00000588687 EN2P19622 333 aaPredicted RBP23.1■■□□□ 1.29
CCDC43-204ENST00000588687 PPIL2Q13356 520 aa23.1■■□□□ 1.29
CCDC43-204ENST00000588687 ARHGAP39Q9C0H5 1083 aa23.1■■□□□ 1.29
CCDC43-204ENST00000588687 RANBP2P49792 3224 aaKnown RBP23.1■■□□□ 1.29
CCDC43-204ENST00000588687 TLR2O60603 784 aa23.09■■□□□ 1.29
CCDC43-204ENST00000588687 CETPP11597 493 aa23.09■■□□□ 1.29
CCDC43-204ENST00000588687 LPIN2Q92539 896 aa23.09■■□□□ 1.29
CCDC43-204ENST00000588687 TMOD2Q9NZR1 351 aa23.09■■□□□ 1.29
CCDC43-204ENST00000588687 DAGLAQ9Y4D2 1042 aa23.09■■□□□ 1.29
CCDC43-204ENST00000588687 DOCK2Q92608 1830 aa23.09■■□□□ 1.29
CCDC43-204ENST00000588687 SLFN5Q08AF3 891 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms