RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 TDRD7Q8NHU6 1098 aaKnown RBP16.48■□□□□ 0.23
CDK5RAP3-234ENST00000584525 TCP10L2B9ZVM9 353 aa16.47■□□□□ 0.23
CDK5RAP3-234ENST00000584525 UBE4AQ14139 1066 aa16.47■□□□□ 0.23
CDK5RAP3-234ENST00000584525 DZIP1LQ8IYY4 767 aaKnown RBP16.47■□□□□ 0.23
CDK5RAP3-234ENST00000584525 ZNF646O15015 1829 aaPredicted RBP16.47■□□□□ 0.23
CDK5RAP3-234ENST00000584525 PTPRCP08575 1304 aa16.46■□□□□ 0.23
CDK5RAP3-234ENST00000584525 EN2P19622 333 aaPredicted RBP16.46■□□□□ 0.23
CDK5RAP3-234ENST00000584525 CRKP46108 304 aa16.46■□□□□ 0.23
CDK5RAP3-234ENST00000584525 MAP3K9P80192 1104 aa16.46■□□□□ 0.23
CDK5RAP3-234ENST00000584525 VPS37DQ86XT2 251 aa16.46■□□□□ 0.23
CDK5RAP3-234ENST00000584525 CDAN1Q8IWY9 1227 aa16.46■□□□□ 0.23
CDK5RAP3-234ENST00000584525 CNKSR2Q8WXI2 1034 aa16.46■□□□□ 0.23
CDK5RAP3-234ENST00000584525 ARMC5Q96C12 935 aa16.46■□□□□ 0.23
CDK5RAP3-234ENST00000584525 FAM84BQ96KN1 310 aaPredicted RBP16.46■□□□□ 0.23
CDK5RAP3-234ENST00000584525 TMEM39BQ9GZU3 492 aa16.46■□□□□ 0.23
CDK5RAP3-234ENST00000584525 MYH3P11055 1940 aa16.45■□□□□ 0.22
CDK5RAP3-234ENST00000584525 TNNI2P48788 182 aa16.45■□□□□ 0.22
CDK5RAP3-234ENST00000584525 GTF2A2P52657 109 aa16.45■□□□□ 0.22
CDK5RAP3-234ENST00000584525 VGLL4Q14135 290 aa16.45■□□□□ 0.22
CDK5RAP3-234ENST00000584525 ARHGEF6Q15052 776 aa16.45■□□□□ 0.22
CDK5RAP3-234ENST00000584525 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.45■□□□□ 0.22
CDK5RAP3-234ENST00000584525 MRPL50Q8N5N7 158 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-234ENST00000584525 BRI3BPQ8WY22 251 aa16.45■□□□□ 0.22
CDK5RAP3-234ENST00000584525 SSH1Q8WYL5 1049 aa16.45■□□□□ 0.22
CDK5RAP3-234ENST00000584525 MS4A4AQ96JQ5 239 aa16.45■□□□□ 0.22
CDK5RAP3-234ENST00000584525 TEPSINQ96N21 525 aa16.45■□□□□ 0.22
CDK5RAP3-234ENST00000584525 PUS3Q9BZE2 481 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-234ENST00000584525 ZFYVE28Q9HCC9 887 aa16.45■□□□□ 0.22
CDK5RAP3-234ENST00000584525 CSADQ9Y600 493 aa16.45■□□□□ 0.22
CDK5RAP3-234ENST00000584525 CCL15-CCL14A0A0B4J2E2 113 aa16.44■□□□□ 0.22
CDK5RAP3-234ENST00000584525 FRAT2O75474 233 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP3-234ENST00000584525 ALDH1L1O75891 902 aa16.44■□□□□ 0.22
CDK5RAP3-234ENST00000584525 CAP1Q01518 475 aa16.44■□□□□ 0.22
CDK5RAP3-234ENST00000584525 CHAF1AQ13111 956 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP3-234ENST00000584525 TAF1CQ15572 869 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP3-234ENST00000584525 CCL15Q16663 113 aa16.44■□□□□ 0.22
CDK5RAP3-234ENST00000584525 TRMT2AQ8IZ69 625 aaKnown RBP16.44■□□□□ 0.22
CDK5RAP3-234ENST00000584525 TMEM106CQ9BVX2 250 aa16.44■□□□□ 0.22
CDK5RAP3-234ENST00000584525 SRCIN1Q9C0H9 1055 aa16.44■□□□□ 0.22
CDK5RAP3-234ENST00000584525 HABP4Q5JVS0 413 aaKnown RBP16.43■□□□□ 0.22
CDK5RAP3-234ENST00000584525 OTUD5Q96G74 571 aa16.43■□□□□ 0.22
CDK5RAP3-234ENST00000584525 SUCLG2Q96I99 432 aa16.43■□□□□ 0.22
CDK5RAP3-234ENST00000584525 IQSEC3Q9UPP2 1182 aaPredicted RBP16.43■□□□□ 0.22
CDK5RAP3-234ENST00000584525 HTTP42858 3142 aa16.43■□□□□ 0.22
CDK5RAP3-234ENST00000584525 MROH5Q6ZUA9 1318 aa16.43■□□□□ 0.22
CDK5RAP3-234ENST00000584525 KIF16BQ96L93 1317 aa16.43■□□□□ 0.22
CDK5RAP3-234ENST00000584525 WDHD1O75717 1129 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP3-234ENST00000584525 GRIK5Q16478 980 aa16.42■□□□□ 0.22
CDK5RAP3-234ENST00000584525 NBPF11Q86T75 865 aa16.42■□□□□ 0.22
CDK5RAP3-234ENST00000584525 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.42■□□□□ 0.22
CDK5RAP3-234ENST00000584525 RIPOR2Q9Y4F9 1068 aa16.42■□□□□ 0.22
CDK5RAP3-234ENST00000584525 CACNB3P54284 484 aa16.41■□□□□ 0.22
CDK5RAP3-234ENST00000584525 SLC4A8Q2Y0W8 1093 aa16.41■□□□□ 0.22
CDK5RAP3-234ENST00000584525 SLC9C1Q4G0N8 1177 aa16.41■□□□□ 0.22
CDK5RAP3-234ENST00000584525 CAVIN4Q5BKX8 364 aa16.41■□□□□ 0.22
CDK5RAP3-234ENST00000584525 METTL24Q5JXM2 366 aa16.41■□□□□ 0.22
CDK5RAP3-234ENST00000584525 FBXO33Q7Z6M2 555 aa16.41■□□□□ 0.22
CDK5RAP3-234ENST00000584525 FAM43AQ8N2R8 423 aa16.41■□□□□ 0.22
CDK5RAP3-234ENST00000584525 TBC1D22AQ8WUA7 517 aa16.41■□□□□ 0.22
CDK5RAP3-234ENST00000584525 ZNF333Q96JL9 665 aa16.41■□□□□ 0.22
CDK5RAP3-234ENST00000584525 API5Q9BZZ5 524 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP3-234ENST00000584525 PTCH2Q9Y6C5 1203 aa16.41■□□□□ 0.22
CDK5RAP3-234ENST00000584525 MYCP01106 439 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP3-234ENST00000584525 NBPF7P0C2Y1 421 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP3-234ENST00000584525 TEKT1Q969V4 418 aa16.4■□□□□ 0.22
CDK5RAP3-234ENST00000584525 KAZALD1Q96I82 304 aa16.4■□□□□ 0.22
CDK5RAP3-234ENST00000584525 TMOD2Q9NZR1 351 aa16.4■□□□□ 0.22
CDK5RAP3-234ENST00000584525 SPDYE5A6NIY4 337 aa16.39■□□□□ 0.21
CDK5RAP3-234ENST00000584525 IPO8O15397 1037 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP3-234ENST00000584525 CETPP11597 493 aa16.39■□□□□ 0.21
CDK5RAP3-234ENST00000584525 HDLBPQ00341 1268 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP3-234ENST00000584525 LRRC24Q50LG9 513 aa16.39■□□□□ 0.21
CDK5RAP3-234ENST00000584525 FRAT1Q92837 279 aaPredicted RBP16.39■□□□□ 0.21
CDK5RAP3-234ENST00000584525 WRNIP1Q96S55 665 aa16.39■□□□□ 0.21
CDK5RAP3-234ENST00000584525 BICC1Q9H694 974 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP3-234ENST00000584525 RARSP54136 660 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-234ENST00000584525 KIF22Q14807 665 aa16.38■□□□□ 0.21
CDK5RAP3-234ENST00000584525 ERO1BQ86YB8 467 aa16.38■□□□□ 0.21
CDK5RAP3-234ENST00000584525 ZKSCAN4Q969J2 545 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP3-234ENST00000584525 HOOK2Q96ED9 719 aa16.38■□□□□ 0.21
CDK5RAP3-234ENST00000584525 YTHDC1Q96MU7 727 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-234ENST00000584525 ZDHHC15Q96MV8 337 aa16.38■□□□□ 0.21
CDK5RAP3-234ENST00000584525 NOB1Q9ULX3 412 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-234ENST00000584525 SNCAIPQ9Y6H5 919 aa16.38■□□□□ 0.21
CDK5RAP3-234ENST00000584525 MKI67P46013 3256 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-234ENST00000584525 TLR2O60603 784 aa16.37■□□□□ 0.21
CDK5RAP3-234ENST00000584525 BCAMP50895 628 aa16.37■□□□□ 0.21
CDK5RAP3-234ENST00000584525 SNAPC2Q13487 334 aa16.37■□□□□ 0.21
CDK5RAP3-234ENST00000584525 ARHGAP39Q9C0H5 1083 aa16.37■□□□□ 0.21
CDK5RAP3-234ENST00000584525 BTBD19C9JJ37 291 aa16.36■□□□□ 0.21
CDK5RAP3-234ENST00000584525 IRF6O14896 467 aa16.36■□□□□ 0.21
CDK5RAP3-234ENST00000584525 PDE8BO95263 885 aa16.36■□□□□ 0.21
CDK5RAP3-234ENST00000584525 RABL6Q3YEC7 729 aaPredicted RBP16.36■□□□□ 0.21
CDK5RAP3-234ENST00000584525 APOBEC3HQ6NTF7 200 aaKnown RBP16.36■□□□□ 0.21
CDK5RAP3-234ENST00000584525 FAM83AQ86UY5 434 aa16.36■□□□□ 0.21
CDK5RAP3-234ENST00000584525 SH3TC2Q8TF17 1288 aa16.36■□□□□ 0.21
CDK5RAP3-234ENST00000584525 MRIQ9BWK5 157 aa16.36■□□□□ 0.21
CDK5RAP3-234ENST00000584525 UTYO14607 1347 aa16.36■□□□□ 0.21
CDK5RAP3-234ENST00000584525 CENPFP49454 3210 aa16.36■□□□□ 0.21
CDK5RAP3-234ENST00000584525 ECM2O94769 699 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms