RNA–Protein interactions for RNA: ENST00000584099.1

ERBB2-217, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-217ENST00000584099 SEMA3EO15041 775 aa16.17■□□□□ 0.18
ERBB2-217ENST00000584099 GNAI3P08754 354 aa16.17■□□□□ 0.18
ERBB2-217ENST00000584099 IL15P40933 162 aaPredicted RBP16.17■□□□□ 0.18
ERBB2-217ENST00000584099 DGKZQ13574 1117 aa16.17■□□□□ 0.18
ERBB2-217ENST00000584099 PKN2Q16513 984 aaKnown RBP16.17■□□□□ 0.18
ERBB2-217ENST00000584099 HHIPL2Q6UWX4 724 aa16.17■□□□□ 0.18
ERBB2-217ENST00000584099 ATG9AQ7Z3C6 839 aa16.17■□□□□ 0.18
ERBB2-217ENST00000584099 TEKT1Q969V4 418 aa16.17■□□□□ 0.18
ERBB2-217ENST00000584099 HOOK2Q96ED9 719 aa16.17■□□□□ 0.18
ERBB2-217ENST00000584099 SLC10A4Q96EP9 437 aa16.17■□□□□ 0.18
ERBB2-217ENST00000584099 ZDHHC15Q96MV8 337 aa16.17■□□□□ 0.18
ERBB2-217ENST00000584099 VEZTQ9HBM0 779 aa16.17■□□□□ 0.18
ERBB2-217ENST00000584099 COPRSQ9NQ92 184 aa16.17■□□□□ 0.18
ERBB2-217ENST00000584099 ZNF70Q9UC06 446 aaPredicted RBP16.17■□□□□ 0.18
ERBB2-217ENST00000584099 BCAMP50895 628 aa16.16■□□□□ 0.18
ERBB2-217ENST00000584099 MTX1Q13505 466 aa16.16■□□□□ 0.18
ERBB2-217ENST00000584099 ANKRD13AQ8IZ07 590 aa16.16■□□□□ 0.18
ERBB2-217ENST00000584099 KLHDC4Q8TBB5 520 aa16.16■□□□□ 0.18
ERBB2-217ENST00000584099 GNL3LQ9NVN8 582 aaKnown RBP16.16■□□□□ 0.18
ERBB2-217ENST00000584099 CEP126Q9P2H0 1117 aa16.16■□□□□ 0.18
ERBB2-217ENST00000584099 JAG2Q9Y219 1238 aa16.16■□□□□ 0.18
ERBB2-217ENST00000584099 NBPF12Q5TAG4 269 aaPredicted RBP16.15■□□□□ 0.18
ERBB2-217ENST00000584099 CTU1Q7Z7A3 348 aaKnown RBP16.15■□□□□ 0.18
ERBB2-217ENST00000584099 FAM83AQ86UY5 434 aa16.15■□□□□ 0.18
ERBB2-217ENST00000584099 PCDHAC2Q9Y5I4 1007 aa16.15■□□□□ 0.18
ERBB2-217ENST00000584099 SSC5DA1L4H1 1573 aa16.14■□□□□ 0.17
ERBB2-217ENST00000584099 USP2O75604 605 aaPredicted RBP16.14■□□□□ 0.17
ERBB2-217ENST00000584099 TEPSINQ96N21 525 aa16.14■□□□□ 0.17
ERBB2-217ENST00000584099 TDRD3Q9H7E2 651 aaKnown RBP16.14■□□□□ 0.17
ERBB2-217ENST00000584099 TMOD2Q9NZR1 351 aa16.14■□□□□ 0.17
ERBB2-217ENST00000584099 SALL1Q9NSC2 1324 aa16.14■□□□□ 0.17
ERBB2-217ENST00000584099 CHAF1AQ13111 956 aaPredicted RBP16.13■□□□□ 0.17
ERBB2-217ENST00000584099 PRKG1Q13976 671 aa16.13■□□□□ 0.17
ERBB2-217ENST00000584099 OTUD7BQ6GQQ9 843 aa16.13■□□□□ 0.17
ERBB2-217ENST00000584099 LRRFIP2Q9Y608 721 aaKnown RBP16.13■□□□□ 0.17
ERBB2-217ENST00000584099 PDS5AQ29RF7 1337 aaKnown RBP16.13■□□□□ 0.17
ERBB2-217ENST00000584099 TESPA1A2RU30 521 aaPredicted RBP16.12■□□□□ 0.17
ERBB2-217ENST00000584099 CCDC85CA6NKD9 419 aa16.12■□□□□ 0.17
ERBB2-217ENST00000584099 GPR25O00155 361 aa16.12■□□□□ 0.17
ERBB2-217ENST00000584099 ATP2B3Q16720 1220 aa16.12■□□□□ 0.17
ERBB2-217ENST00000584099 APOBEC3HQ6NTF7 200 aaKnown RBP16.12■□□□□ 0.17
ERBB2-217ENST00000584099 ATF7IPQ6VMQ6 1270 aa16.12■□□□□ 0.17
ERBB2-217ENST00000584099 ZGPATQ8N5A5 531 aaKnown RBP16.12■□□□□ 0.17
ERBB2-217ENST00000584099 WNK4Q96J92 1243 aa16.12■□□□□ 0.17
ERBB2-217ENST00000584099 AOX1Q06278 1338 aa16.12■□□□□ 0.17
ERBB2-217ENST00000584099 RPAP1Q9BWH6 1393 aaPredicted RBP16.12■□□□□ 0.17
ERBB2-217ENST00000584099 ZNF296Q8WUU4 475 aaPredicted RBP16.11■□□□□ 0.17
ERBB2-217ENST00000584099 MEIS3Q99687 375 aa16.11■□□□□ 0.17
ERBB2-217ENST00000584099 DENND2AQ9ULE3 1009 aa16.11■□□□□ 0.17
ERBB2-217ENST00000584099 IQSEC3Q9UPP2 1182 aaPredicted RBP16.11■□□□□ 0.17
ERBB2-217ENST00000584099 AKAP2Q9Y2D5 859 aa16.11■□□□□ 0.17
ERBB2-217ENST00000584099 MAP3K9P80192 1104 aa16.1■□□□□ 0.17
ERBB2-217ENST00000584099 GRIK5Q16478 980 aa16.1■□□□□ 0.17
ERBB2-217ENST00000584099 IFNL1Q8IU54 200 aa16.1■□□□□ 0.17
ERBB2-217ENST00000584099 ARAP2Q8WZ64 1704 aa16.09■□□□□ 0.17
ERBB2-217ENST00000584099 FKTNO75072 461 aa16.09■□□□□ 0.17
ERBB2-217ENST00000584099 TBC1D8O95759 1140 aa16.09■□□□□ 0.17
ERBB2-217ENST00000584099 GNAI2P04899 355 aa16.09■□□□□ 0.17
ERBB2-217ENST00000584099 TRIM27P14373 513 aa16.09■□□□□ 0.17
ERBB2-217ENST00000584099 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.09■□□□□ 0.17
ERBB2-217ENST00000584099 CLMNQ96JQ2 1002 aa16.09■□□□□ 0.17
ERBB2-217ENST00000584099 TMEM39BQ9GZU3 492 aa16.09■□□□□ 0.17
ERBB2-217ENST00000584099 SIL1Q9H173 461 aa16.09■□□□□ 0.17
ERBB2-217ENST00000584099 ECM29Q5VYK3 1845 aa16.08■□□□□ 0.17
ERBB2-217ENST00000584099 TCP10L2B9ZVM9 353 aa16.08■□□□□ 0.16
ERBB2-217ENST00000584099 SRGAP3O43295 1099 aa16.08■□□□□ 0.16
ERBB2-217ENST00000584099 LDHBP07195 334 aaKnown RBP16.08■□□□□ 0.16
ERBB2-217ENST00000584099 MLLT1Q03111 559 aaPredicted RBP16.08■□□□□ 0.16
ERBB2-217ENST00000584099 DCAF15Q66K64 600 aa16.08■□□□□ 0.16
ERBB2-217ENST00000584099 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.08■□□□□ 0.16
ERBB2-217ENST00000584099 SLF2Q8IX21 1173 aa16.08■□□□□ 0.16
ERBB2-217ENST00000584099 ZCCHC17Q9NP64 241 aaKnown RBP16.08■□□□□ 0.16
ERBB2-217ENST00000584099 CSADQ9Y600 493 aa16.08■□□□□ 0.16
ERBB2-217ENST00000584099 GTF2A2P52657 109 aa16.07■□□□□ 0.16
ERBB2-217ENST00000584099 MKRN3Q13064 507 aaKnown RBP16.07■□□□□ 0.16
ERBB2-217ENST00000584099 MVPQ14764 893 aaKnown RBP16.07■□□□□ 0.16
ERBB2-217ENST00000584099 CCDC102BQ68D86 513 aa16.07■□□□□ 0.16
ERBB2-217ENST00000584099 FAM151AQ8WW52 585 aa16.07■□□□□ 0.16
ERBB2-217ENST00000584099 FZD1Q9UP38 647 aa16.07■□□□□ 0.16
ERBB2-217ENST00000584099 AKAP11Q9UKA4 1901 aa16.07■□□□□ 0.16
ERBB2-217ENST00000584099 CASP8AP2Q9UKL3 1982 aa16.06■□□□□ 0.16
ERBB2-217ENST00000584099 SPDYE5A6NIY4 337 aa16.06■□□□□ 0.16
ERBB2-217ENST00000584099 IGSF3O75054 1194 aa16.06■□□□□ 0.16
ERBB2-217ENST00000584099 VGLL4Q14135 290 aa16.06■□□□□ 0.16
ERBB2-217ENST00000584099 ZKSCAN2Q63HK3 967 aa16.06■□□□□ 0.16
ERBB2-217ENST00000584099 SPTY2D1Q68D10 685 aaPredicted RBP16.06■□□□□ 0.16
ERBB2-217ENST00000584099 FBXO46Q6PJ61 603 aaPredicted RBP16.06■□□□□ 0.16
ERBB2-217ENST00000584099 OPTNQ96CV9 577 aa16.06■□□□□ 0.16
ERBB2-217ENST00000584099 FAM163AQ96GL9 167 aaPredicted RBP16.06■□□□□ 0.16
ERBB2-217ENST00000584099 IGF2BP3O00425 579 aaKnown RBP eCLIP16.05■□□□□ 0.16
ERBB2-217ENST00000584099 WDHD1O75717 1129 aaPredicted RBP16.05■□□□□ 0.16
ERBB2-217ENST00000584099 MAP4K4O95819 1239 aaPredicted RBP16.05■□□□□ 0.16
ERBB2-217ENST00000584099 ERO1BQ86YB8 467 aa16.05■□□□□ 0.16
ERBB2-217ENST00000584099 MS4A4AQ96JQ5 239 aa16.05■□□□□ 0.16
ERBB2-217ENST00000584099 PA2G4Q9UQ80 394 aaKnown RBP16.05■□□□□ 0.16
ERBB2-217ENST00000584099 DAGLAQ9Y4D2 1042 aa16.05■□□□□ 0.16
ERBB2-217ENST00000584099 A0A1B0GUL7 405 aa16.04■□□□□ 0.16
ERBB2-217ENST00000584099 PRDX5P30044 214 aa16.04■□□□□ 0.16
ERBB2-217ENST00000584099 GJA5P36382 358 aa16.04■□□□□ 0.16
ERBB2-217ENST00000584099 PHKA1P46020 1223 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms