RNA–Protein interactions for RNA: ENST00000583092.1

PPP4R1-224, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-224ENST00000583092 SLFN5Q08AF3 891 aa12.82□□□□□ -0.36
PPP4R1-224ENST00000583092 PUM3Q15397 648 aaKnown RBP12.82□□□□□ -0.36
PPP4R1-224ENST00000583092 SPDYE2Q495Y8 402 aa12.82□□□□□ -0.36
PPP4R1-224ENST00000583092 FBXO46Q6PJ61 603 aaPredicted RBP12.82□□□□□ -0.36
PPP4R1-224ENST00000583092 SSH1Q8WYL5 1049 aa12.82□□□□□ -0.36
PPP4R1-224ENST00000583092 MRIQ9BWK5 157 aa12.82□□□□□ -0.36
PPP4R1-224ENST00000583092 CFHR5Q9BXR6 569 aa12.82□□□□□ -0.36
PPP4R1-224ENST00000583092 HPS5Q9UPZ3 1129 aa12.82□□□□□ -0.36
PPP4R1-224ENST00000583092 ZNF521Q96K83 1311 aa12.82□□□□□ -0.36
PPP4R1-224ENST00000583092 UBTFL1P0CB47 393 aaPredicted RBP12.81□□□□□ -0.36
PPP4R1-224ENST00000583092 SOX10P56693 466 aa12.81□□□□□ -0.36
PPP4R1-224ENST00000583092 MAP3K9P80192 1104 aa12.81□□□□□ -0.36
PPP4R1-224ENST00000583092 LRRC24Q50LG9 513 aa12.81□□□□□ -0.36
PPP4R1-224ENST00000583092 WDR66Q8TBY9 1149 aa12.81□□□□□ -0.36
PPP4R1-224ENST00000583092 ERO1AQ96HE7 468 aa12.81□□□□□ -0.36
PPP4R1-224ENST00000583092 KAZALD1Q96I82 304 aa12.81□□□□□ -0.36
PPP4R1-224ENST00000583092 API5Q9BZZ5 524 aaKnown RBP12.81□□□□□ -0.36
PPP4R1-224ENST00000583092 USP44Q9H0E7 712 aa12.81□□□□□ -0.36
PPP4R1-224ENST00000583092 CEP126Q9P2H0 1117 aa12.81□□□□□ -0.36
PPP4R1-224ENST00000583092 IQSEC3Q9UPP2 1182 aaPredicted RBP12.81□□□□□ -0.36
PPP4R1-224ENST00000583092 PCDHAC2Q9Y5I4 1007 aa12.81□□□□□ -0.36
PPP4R1-224ENST00000583092 EYA2O00167 538 aa12.8□□□□□ -0.36
PPP4R1-224ENST00000583092 BCAMP50895 628 aa12.8□□□□□ -0.36
PPP4R1-224ENST00000583092 ANKRD44Q8N8A2 993 aa12.8□□□□□ -0.36
PPP4R1-224ENST00000583092 LPIN2Q92539 896 aa12.8□□□□□ -0.36
PPP4R1-224ENST00000583092 CLMNQ96JQ2 1002 aa12.8□□□□□ -0.36
PPP4R1-224ENST00000583092 FBXO3Q9UK99 471 aa12.8□□□□□ -0.36
PPP4R1-224ENST00000583092 FZD1Q9UP38 647 aa12.8□□□□□ -0.36
PPP4R1-224ENST00000583092 GTF2A2P52657 109 aa12.79□□□□□ -0.36
PPP4R1-224ENST00000583092 DCAF15Q66K64 600 aa12.79□□□□□ -0.36
PPP4R1-224ENST00000583092 ELP3Q9H9T3 547 aa12.79□□□□□ -0.36
PPP4R1-224ENST00000583092 ZFYVE28Q9HCC9 887 aa12.79□□□□□ -0.36
PPP4R1-224ENST00000583092 TRIM17Q9Y577 477 aa12.79□□□□□ -0.36
PPP4R1-224ENST00000583092 KIF16BQ96L93 1317 aa12.79□□□□□ -0.36
PPP4R1-224ENST00000583092 INTS3Q68E01 1043 aaKnown RBP12.78□□□□□ -0.36
PPP4R1-224ENST00000583092 HHIPL2Q6UWX4 724 aa12.78□□□□□ -0.36
PPP4R1-224ENST00000583092 OPTNQ96CV9 577 aa12.78□□□□□ -0.36
PPP4R1-224ENST00000583092 SP3Q02447 781 aa12.77□□□□□ -0.37
PPP4R1-224ENST00000583092 KIF22Q14807 665 aa12.77□□□□□ -0.37
PPP4R1-224ENST00000583092 FKBP1CQ5VVH2 108 aa12.77□□□□□ -0.37
PPP4R1-224ENST00000583092 FAM83AQ86UY5 434 aa12.77□□□□□ -0.37
PPP4R1-224ENST00000583092 KLHDC4Q8TBB5 520 aa12.77□□□□□ -0.37
PPP4R1-224ENST00000583092 ZDHHC15Q96MV8 337 aa12.77□□□□□ -0.37
PPP4R1-224ENST00000583092 TMEM39BQ9GZU3 492 aa12.77□□□□□ -0.37
PPP4R1-224ENST00000583092 NOB1Q9ULX3 412 aaKnown RBP12.77□□□□□ -0.37
PPP4R1-224ENST00000583092 IPO8O15397 1037 aaKnown RBP12.76□□□□□ -0.37
PPP4R1-224ENST00000583092 CETPP11597 493 aa12.76□□□□□ -0.37
PPP4R1-224ENST00000583092 IL15P40933 162 aaPredicted RBP12.76□□□□□ -0.37
PPP4R1-224ENST00000583092 TAF1CQ15572 869 aaPredicted RBP12.76□□□□□ -0.37
PPP4R1-224ENST00000583092 ATP2B3Q16720 1220 aa12.76□□□□□ -0.37
PPP4R1-224ENST00000583092 SLF2Q8IX21 1173 aa12.76□□□□□ -0.37
PPP4R1-224ENST00000583092 ZGPATQ8N5A5 531 aaKnown RBP12.76□□□□□ -0.37
PPP4R1-224ENST00000583092 VGLL2Q8N8G2 317 aa12.76□□□□□ -0.37
PPP4R1-224ENST00000583092 EFCC1Q9HA90 598 aa12.76□□□□□ -0.37
PPP4R1-224ENST00000583092 DENND2AQ9ULE3 1009 aa12.76□□□□□ -0.37
PPP4R1-224ENST00000583092 CCL15-CCL14A0A0B4J2E2 113 aa12.75□□□□□ -0.37
PPP4R1-224ENST00000583092 TESPA1A2RU30 521 aaPredicted RBP12.75□□□□□ -0.37
PPP4R1-224ENST00000583092 IGF2BP3O00425 579 aaKnown RBP eCLIP12.75□□□□□ -0.37
PPP4R1-224ENST00000583092 SEMA3EO15041 775 aa12.75□□□□□ -0.37
PPP4R1-224ENST00000583092 CIAO1O76071 339 aa12.75□□□□□ -0.37
PPP4R1-224ENST00000583092 LDHBP07195 334 aaKnown RBP12.75□□□□□ -0.37
PPP4R1-224ENST00000583092 FGFR2P21802 821 aa12.75□□□□□ -0.37
PPP4R1-224ENST00000583092 CRHR2Q13324 411 aa12.75□□□□□ -0.37
PPP4R1-224ENST00000583092 CCL15Q16663 113 aa12.75□□□□□ -0.37
PPP4R1-224ENST00000583092 NBPF11Q86T75 865 aa12.75□□□□□ -0.37
PPP4R1-224ENST00000583092 ERO1BQ86YB8 467 aa12.75□□□□□ -0.37
PPP4R1-224ENST00000583092 OTUD5Q96G74 571 aa12.75□□□□□ -0.37
PPP4R1-224ENST00000583092 CDCA7LQ96GN5 454 aa12.75□□□□□ -0.37
PPP4R1-224ENST00000583092 ZNF341Q9BYN7 854 aa12.75□□□□□ -0.37
PPP4R1-224ENST00000583092 SIL1Q9H173 461 aa12.75□□□□□ -0.37
PPP4R1-224ENST00000583092 CCER2I3L3R5 266 aa12.74□□□□□ -0.37
PPP4R1-224ENST00000583092 GNAI3P08754 354 aa12.74□□□□□ -0.37
PPP4R1-224ENST00000583092 CACNB3P54284 484 aa12.74□□□□□ -0.37
PPP4R1-224ENST00000583092 SNAPC2Q13487 334 aa12.74□□□□□ -0.37
PPP4R1-224ENST00000583092 VGLL4Q14135 290 aa12.74□□□□□ -0.37
PPP4R1-224ENST00000583092 SPTY2D1Q68D10 685 aaPredicted RBP12.74□□□□□ -0.37
PPP4R1-224ENST00000583092 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.74□□□□□ -0.37
PPP4R1-224ENST00000583092 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.74□□□□□ -0.37
PPP4R1-224ENST00000583092 TEPSINQ96N21 525 aa12.74□□□□□ -0.37
PPP4R1-224ENST00000583092 WRNIP1Q96S55 665 aa12.74□□□□□ -0.37
PPP4R1-224ENST00000583092 TMEM106CQ9BVX2 250 aa12.74□□□□□ -0.37
PPP4R1-224ENST00000583092 R3HDMLQ9H3Y0 253 aa12.74□□□□□ -0.37
PPP4R1-224ENST00000583092 AKAP2Q9Y2D5 859 aa12.74□□□□□ -0.37
PPP4R1-224ENST00000583092 AOX1Q06278 1338 aa12.73□□□□□ -0.37
PPP4R1-224ENST00000583092 RFX5P48382 616 aaPredicted RBP12.73□□□□□ -0.37
PPP4R1-224ENST00000583092 APOBEC3HQ6NTF7 200 aaKnown RBP12.73□□□□□ -0.37
PPP4R1-224ENST00000583092 OTOP1Q7RTM1 612 aa12.73□□□□□ -0.37
PPP4R1-224ENST00000583092 CD99L2Q8TCZ2 262 aa12.73□□□□□ -0.37
PPP4R1-224ENST00000583092 FAM151AQ8WW52 585 aa12.73□□□□□ -0.37
PPP4R1-224ENST00000583092 ARHGAP45Q92619 1136 aa12.73□□□□□ -0.37
PPP4R1-224ENST00000583092 PDE4DIPQ5VU43 2346 aa12.73□□□□□ -0.37
PPP4R1-224ENST00000583092 SPDYE5A6NIY4 337 aa12.72□□□□□ -0.37
PPP4R1-224ENST00000583092 GJA5P36382 358 aa12.72□□□□□ -0.37
PPP4R1-224ENST00000583092 GRIK5Q16478 980 aa12.72□□□□□ -0.37
PPP4R1-224ENST00000583092 GORABQ5T7V8 394 aa12.72□□□□□ -0.37
PPP4R1-224ENST00000583092 MS4A4AQ96JQ5 239 aa12.72□□□□□ -0.37
PPP4R1-224ENST00000583092 ZCCHC17Q9NP64 241 aaKnown RBP12.72□□□□□ -0.37
PPP4R1-224ENST00000583092 USP40Q9NVE5 1235 aa12.72□□□□□ -0.37
PPP4R1-224ENST00000583092 PTPN22Q9Y2R2 807 aa12.72□□□□□ -0.37
PPP4R1-224ENST00000583092 LRRFIP2Q9Y608 721 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms