RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 VPS37DQ86XT2 251 aa12.18□□□□□ -0.46
GGA3-209ENST00000580646 MTMR14Q8NCE2 650 aa12.18□□□□□ -0.46
GGA3-209ENST00000580646 ABHD8Q96I13 439 aa12.18□□□□□ -0.46
GGA3-209ENST00000580646 BEGAINQ9BUH8 593 aa12.18□□□□□ -0.46
GGA3-209ENST00000580646 DCTPP1Q9H773 170 aa12.18□□□□□ -0.46
GGA3-209ENST00000580646 PRDM10Q9NQV6 1147 aa12.18□□□□□ -0.46
GGA3-209ENST00000580646 LBX1P52954 281 aa12.17□□□□□ -0.46
GGA3-209ENST00000580646 FKBP1BP68106 108 aa12.17□□□□□ -0.46
GGA3-209ENST00000580646 TFCP2Q12800 502 aa12.17□□□□□ -0.46
GGA3-209ENST00000580646 NOGQ13253 232 aa12.17□□□□□ -0.46
GGA3-209ENST00000580646 OS9Q13438 667 aaPredicted RBP12.17□□□□□ -0.46
GGA3-209ENST00000580646 CFAP100Q494V2 611 aa12.17□□□□□ -0.46
GGA3-209ENST00000580646 MFSD14BQ5SR56 506 aa12.17□□□□□ -0.46
GGA3-209ENST00000580646 APOBEC3FQ8IUX4 373 aaKnown RBP12.17□□□□□ -0.46
GGA3-209ENST00000580646 CCDC102AQ96A19 550 aa12.17□□□□□ -0.46
GGA3-209ENST00000580646 KIF1BPQ96EK5 621 aa12.17□□□□□ -0.46
GGA3-209ENST00000580646 POLR2AP24928 1970 aaKnown RBP12.17□□□□□ -0.46
GGA3-209ENST00000580646 AKAP11Q9UKA4 1901 aa12.17□□□□□ -0.46
GGA3-209ENST00000580646 A0A1B0GUL7 405 aa12.16□□□□□ -0.46
GGA3-209ENST00000580646 FAM155AB1AL88 458 aaPredicted RBP12.16□□□□□ -0.46
GGA3-209ENST00000580646 HSPA8P11142 646 aaKnown RBP12.16□□□□□ -0.46
GGA3-209ENST00000580646 BCAMP50895 628 aa12.16□□□□□ -0.46
GGA3-209ENST00000580646 ZNF157P51786 506 aaPredicted RBP12.16□□□□□ -0.46
GGA3-209ENST00000580646 PRMT6Q96LA8 375 aaPredicted RBP12.16□□□□□ -0.46
GGA3-209ENST00000580646 ZIC5Q96T25 663 aa12.16□□□□□ -0.46
GGA3-209ENST00000580646 IQSEC3Q9UPP2 1182 aaPredicted RBP12.16□□□□□ -0.46
GGA3-209ENST00000580646 EXOC6BQ9Y2D4 811 aa12.16□□□□□ -0.46
GGA3-209ENST00000580646 PCDHAC2Q9Y5I4 1007 aa12.16□□□□□ -0.46
GGA3-209ENST00000580646 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
GGA3-209ENST00000580646 FRAT2O75474 233 aaPredicted RBP12.15□□□□□ -0.46
GGA3-209ENST00000580646 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
GGA3-209ENST00000580646 NF2P35240 595 aa12.15□□□□□ -0.46
GGA3-209ENST00000580646 RBM5P52756 815 aaKnown RBP eCLIP12.15□□□□□ -0.46
GGA3-209ENST00000580646 CHAF1AQ13111 956 aaPredicted RBP12.15□□□□□ -0.46
GGA3-209ENST00000580646 TNNI3KQ59H18 835 aa12.15□□□□□ -0.46
GGA3-209ENST00000580646 RHPN1Q8TCX5 695 aa12.15□□□□□ -0.46
GGA3-209ENST00000580646 GCC1Q96CN9 775 aa12.15□□□□□ -0.46
GGA3-209ENST00000580646 TTF2Q9UNY4 1162 aaKnown RBP12.15□□□□□ -0.46
GGA3-209ENST00000580646 FPGT-TNNI3KV9GXZ4 949 aa12.15□□□□□ -0.46
GGA3-209ENST00000580646 PDS5AQ29RF7 1337 aaKnown RBP12.14□□□□□ -0.47
GGA3-209ENST00000580646 ECM29Q5VYK3 1845 aa12.14□□□□□ -0.47
GGA3-209ENST00000580646 CLRN2A0PK11 232 aa12.14□□□□□ -0.47
GGA3-209ENST00000580646 UBE2Q2LH0YL09 131 aa12.14□□□□□ -0.47
GGA3-209ENST00000580646 SEMA3EO15041 775 aa12.14□□□□□ -0.47
GGA3-209ENST00000580646 MYO1BO43795 1136 aa12.14□□□□□ -0.47
GGA3-209ENST00000580646 KIF23Q02241 960 aaPredicted RBP12.14□□□□□ -0.47
GGA3-209ENST00000580646 TTLL12Q14166 644 aaPredicted RBP12.14□□□□□ -0.47
GGA3-209ENST00000580646 MOB2Q70IA6 237 aa12.14□□□□□ -0.47
GGA3-209ENST00000580646 TBC1D22AQ8WUA7 517 aa12.14□□□□□ -0.47
GGA3-209ENST00000580646 DEFB129Q9H1M3 183 aa12.14□□□□□ -0.47
GGA3-209ENST00000580646 RWDD1Q9H446 243 aaPredicted RBP12.14□□□□□ -0.47
GGA3-209ENST00000580646 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.14□□□□□ -0.47
GGA3-209ENST00000580646 CA12O43570 354 aa12.13□□□□□ -0.47
GGA3-209ENST00000580646 SLC10A3P09131 477 aa12.13□□□□□ -0.47
GGA3-209ENST00000580646 TIMM10P62072 90 aa12.13□□□□□ -0.47
GGA3-209ENST00000580646 GRIK5Q16478 980 aa12.13□□□□□ -0.47
GGA3-209ENST00000580646 CLASRPQ8N2M8 674 aaKnown RBP12.13□□□□□ -0.47
GGA3-209ENST00000580646 XAGE2Q96GT9 111 aa12.13□□□□□ -0.47
GGA3-209ENST00000580646 ZNF512BQ96KM6 892 aaPredicted RBP12.13□□□□□ -0.47
GGA3-209ENST00000580646 LRRCC1Q9C099 1032 aa12.13□□□□□ -0.47
GGA3-209ENST00000580646 VEZTQ9HBM0 779 aa12.13□□□□□ -0.47
GGA3-209ENST00000580646 GNL3LQ9NVN8 582 aaKnown RBP12.13□□□□□ -0.47
GGA3-209ENST00000580646 SERPINA10Q9UK55 444 aa12.13□□□□□ -0.47
GGA3-209ENST00000580646 AOX1Q06278 1338 aa12.12□□□□□ -0.47
GGA3-209ENST00000580646 THSD7BQ9C0I4 1608 aa12.12□□□□□ -0.47
GGA3-209ENST00000580646 DOCK2Q92608 1830 aa12.12□□□□□ -0.47
GGA3-209ENST00000580646 ARID4AP29374 1257 aaPredicted RBP12.12□□□□□ -0.47
GGA3-209ENST00000580646 CRKP46108 304 aa12.12□□□□□ -0.47
GGA3-209ENST00000580646 RGS19P49795 217 aa12.12□□□□□ -0.47
GGA3-209ENST00000580646 IRX6P78412 446 aaPredicted RBP12.12□□□□□ -0.47
GGA3-209ENST00000580646 ERICH6BQ5W0A0 696 aa12.12□□□□□ -0.47
GGA3-209ENST00000580646 CCDC102BQ68D86 513 aa12.12□□□□□ -0.47
GGA3-209ENST00000580646 ARMC9Q7Z3E5 817 aa12.12□□□□□ -0.47
GGA3-209ENST00000580646 RASAL3Q86YV0 1011 aa12.12□□□□□ -0.47
GGA3-209ENST00000580646 SMC5Q8IY18 1101 aa12.12□□□□□ -0.47
GGA3-209ENST00000580646 EAF2Q96CJ1 260 aaPredicted RBP12.12□□□□□ -0.47
GGA3-209ENST00000580646 ANP32EQ9BTT0 268 aa12.12□□□□□ -0.47
GGA3-209ENST00000580646 TSKSQ9UJT2 592 aa12.12□□□□□ -0.47
GGA3-209ENST00000580646 PPP2R3BQ9Y5P8 575 aa12.12□□□□□ -0.47
GGA3-209ENST00000580646 MAST2Q6P0Q8 1798 aa12.11□□□□□ -0.47
GGA3-209ENST00000580646 IGSF3O75054 1194 aa12.11□□□□□ -0.47
GGA3-209ENST00000580646 NEFLP07196 543 aa12.11□□□□□ -0.47
GGA3-209ENST00000580646 ADORA1P30542 326 aa12.11□□□□□ -0.47
GGA3-209ENST00000580646 HDLBPQ00341 1268 aaKnown RBP12.11□□□□□ -0.47
GGA3-209ENST00000580646 MLLT1Q03111 559 aaPredicted RBP12.11□□□□□ -0.47
GGA3-209ENST00000580646 PRKG1Q13976 671 aa12.11□□□□□ -0.47
GGA3-209ENST00000580646 SPDYE2Q495Y8 402 aa12.11□□□□□ -0.47
GGA3-209ENST00000580646 NEUROD6Q96NK8 337 aa12.11□□□□□ -0.47
GGA3-209ENST00000580646 TDRD3Q9H7E2 651 aaKnown RBP12.11□□□□□ -0.47
GGA3-209ENST00000580646 ZNF70Q9UC06 446 aaPredicted RBP12.11□□□□□ -0.47
GGA3-209ENST00000580646 DBNLQ9UJU6 430 aaKnown RBP12.11□□□□□ -0.47
GGA3-209ENST00000580646 DENND2AQ9ULE3 1009 aa12.11□□□□□ -0.47
GGA3-209ENST00000580646 SUGT1Q9Y2Z0 365 aa12.11□□□□□ -0.47
GGA3-209ENST00000580646 SALL1Q9NSC2 1324 aa12.11□□□□□ -0.47
GGA3-209ENST00000580646 MYO5AQ9Y4I1 1855 aaKnown RBP12.1□□□□□ -0.47
GGA3-209ENST00000580646 TNRC18O15417 2968 aaPredicted RBP12.1□□□□□ -0.47
GGA3-209ENST00000580646 COL1A1P02452 1464 aaPredicted RBP12.1□□□□□ -0.47
GGA3-209ENST00000580646 MYH7P12883 1935 aa12.1□□□□□ -0.47
GGA3-209ENST00000580646 UQCRFS1P1P0C7P4 283 aa12.1□□□□□ -0.47
GGA3-209ENST00000580646 PHKA1P46020 1223 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms