RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 LIMCH1Q9UPQ0 1083 aa6.39□□□□□ -1.39
VAPA-203ENST00000577539 AOX1Q06278 1338 aa6.39□□□□□ -1.39
VAPA-203ENST00000577539 GRM8O00222 908 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 TLL1O43897 1013 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 SCNN1DP51172 638 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 MARSP56192 900 aaKnown RBP6.38□□□□□ -1.39
VAPA-203ENST00000577539 USP48Q86UV5 1035 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 METTL16Q86W50 562 aaKnown RBP6.38□□□□□ -1.39
VAPA-203ENST00000577539 ERC1Q8IUD2 1116 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 TCEANC2Q96MN5 208 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 PDRG1Q9NUG6 133 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 LGR5O75473 907 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 ALDH1L1O75891 902 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 PTH1RQ03431 593 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 LRSAM1Q6UWE0 723 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 ARHGEF25Q86VW2 580 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 TICAM2Q86XR7 235 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 NECAB1Q8N987 351 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 SUCLG2Q96I99 432 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 MYD88Q99836 296 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 LSG1Q9H089 658 aaKnown RBP6.38□□□□□ -1.39
VAPA-203ENST00000577539 TSPY26PQ9H489 355 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 BICC1Q9H694 974 aaKnown RBP6.38□□□□□ -1.39
VAPA-203ENST00000577539 HYPKQ9NX55 129 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 CNPY2Q9Y2B0 182 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.38□□□□□ -1.39
VAPA-203ENST00000577539 CYP46A1Q9Y6A2 500 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 TTC5Q8N0Z6 440 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 LINS1Q8NG48 757 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 GIPC2Q8TF65 315 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 DDX17Q92841 729 aaKnown RBP6.38□□□□□ -1.39
VAPA-203ENST00000577539 DNAAF2Q9NVR5 837 aaKnown RBP6.38□□□□□ -1.39
VAPA-203ENST00000577539 ADCY9O60503 1353 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 ARHGAP23Q9P227 1491 aa6.38□□□□□ -1.39
VAPA-203ENST00000577539 RGPD8O14715 1765 aaPredicted RBP6.37□□□□□ -1.39
VAPA-203ENST00000577539 STAU1O95793 577 aaKnown RBP6.37□□□□□ -1.39
VAPA-203ENST00000577539 TCF3P15923 654 aa6.37□□□□□ -1.39
VAPA-203ENST00000577539 DSC3Q14574 896 aa6.37□□□□□ -1.39
VAPA-203ENST00000577539 CHRNA2Q15822 529 aa6.37□□□□□ -1.39
VAPA-203ENST00000577539 COPS6Q7L5N1 327 aa6.37□□□□□ -1.39
VAPA-203ENST00000577539 XAGE3Q8WTP9 111 aa6.37□□□□□ -1.39
VAPA-203ENST00000577539 CEMIPQ8WUJ3 1361 aa6.37□□□□□ -1.39
VAPA-203ENST00000577539 PRIMPOLQ96LW4 560 aa6.37□□□□□ -1.39
VAPA-203ENST00000577539 FAM227BQ96M60 508 aa6.37□□□□□ -1.39
VAPA-203ENST00000577539 TTC41PQ6P2S7 1318 aa6.37□□□□□ -1.39
VAPA-203ENST00000577539 STX6O43752 255 aa6.37□□□□□ -1.39
VAPA-203ENST00000577539 TATP17735 454 aaPredicted RBP6.37□□□□□ -1.39
VAPA-203ENST00000577539 RUFY3Q7L099 469 aa6.37□□□□□ -1.39
VAPA-203ENST00000577539 FERMT3Q86UX7 667 aa6.37□□□□□ -1.39
VAPA-203ENST00000577539 EAF2Q96CJ1 260 aaPredicted RBP6.37□□□□□ -1.39
VAPA-203ENST00000577539 PPP1R9BQ96SB3 815 aa6.37□□□□□ -1.39
VAPA-203ENST00000577539 BCCIPQ9P287 314 aaKnown RBP eCLIP6.37□□□□□ -1.39
VAPA-203ENST00000577539 PTCD1O75127 700 aaKnown RBP6.37□□□□□ -1.39
VAPA-203ENST00000577539 SYT1P21579 422 aa6.37□□□□□ -1.39
VAPA-203ENST00000577539 FGD1P98174 961 aa6.37□□□□□ -1.39
VAPA-203ENST00000577539 NMIQ13287 307 aaPredicted RBP6.37□□□□□ -1.39
VAPA-203ENST00000577539 ADCK5Q3MIX3 580 aa6.37□□□□□ -1.39
VAPA-203ENST00000577539 LARP1Q6PKG0 1096 aaKnown RBP6.37□□□□□ -1.39
VAPA-203ENST00000577539 EVI5LQ96CN4 794 aa6.37□□□□□ -1.39
VAPA-203ENST00000577539 DDX21Q9NR30 783 aaKnown RBP eCLIP6.37□□□□□ -1.39
VAPA-203ENST00000577539 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.37□□□□□ -1.39
VAPA-203ENST00000577539 RBM8AQ9Y5S9 174 aaKnown RBP6.37□□□□□ -1.39
VAPA-203ENST00000577539 PIK3C2AO00443 1686 aa6.37□□□□□ -1.39
VAPA-203ENST00000577539 SLIT1O75093 1534 aa6.36□□□□□ -1.39
VAPA-203ENST00000577539 LARGE1O95461 756 aa6.36□□□□□ -1.39
VAPA-203ENST00000577539 ZSCAN22P10073 491 aaPredicted RBP6.36□□□□□ -1.39
VAPA-203ENST00000577539 GJB2P29033 226 aa6.36□□□□□ -1.39
VAPA-203ENST00000577539 STK3Q13188 491 aa6.36□□□□□ -1.39
VAPA-203ENST00000577539 ERFEQ4G0M1 354 aa6.36□□□□□ -1.39
VAPA-203ENST00000577539 EDC3Q96F86 508 aaKnown RBP6.36□□□□□ -1.39
VAPA-203ENST00000577539 DNAJC2Q99543 621 aaKnown RBP6.36□□□□□ -1.39
VAPA-203ENST00000577539 NUDT12Q9BQG2 462 aa6.36□□□□□ -1.39
VAPA-203ENST00000577539 NAP1L2Q9ULW6 460 aaPredicted RBP6.36□□□□□ -1.39
VAPA-203ENST00000577539 KIF13AQ9H1H9 1805 aa6.36□□□□□ -1.39
VAPA-203ENST00000577539 RGPD1P0DJD0 1748 aa6.36□□□□□ -1.39
VAPA-203ENST00000577539 TOPAZ1Q8N9V7 1692 aa6.36□□□□□ -1.39
VAPA-203ENST00000577539 COL26A1Q96A83 441 aa6.36□□□□□ -1.39
VAPA-203ENST00000577539 SCUBE2Q9NQ36 999 aa6.36□□□□□ -1.39
VAPA-203ENST00000577539 TLR7Q9NYK1 1049 aaKnown RBP6.36□□□□□ -1.39
VAPA-203ENST00000577539 ATP6V1DQ9Y5K8 247 aa6.36□□□□□ -1.39
VAPA-203ENST00000577539 ATF3P18847 181 aa6.36□□□□□ -1.39
VAPA-203ENST00000577539 FMR1Q06787 632 aaKnown RBP eCLIP6.36□□□□□ -1.39
VAPA-203ENST00000577539 DNTTIP2Q5QJE6 756 aaKnown RBP6.36□□□□□ -1.39
VAPA-203ENST00000577539 ZNF790Q6PG37 636 aa6.36□□□□□ -1.39
VAPA-203ENST00000577539 UBE3BQ7Z3V4 1068 aa6.36□□□□□ -1.39
VAPA-203ENST00000577539 R3HCC1Q9Y3T6 440 aaKnown RBP6.36□□□□□ -1.39
VAPA-203ENST00000577539 GOLGA6L4A6NEF3 574 aa6.35□□□□□ -1.39
VAPA-203ENST00000577539 M0R2N6 131 aa6.35□□□□□ -1.39
VAPA-203ENST00000577539 SASH1O94885 1247 aa6.35□□□□□ -1.39
VAPA-203ENST00000577539 FMNL1O95466 1100 aaPredicted RBP6.35□□□□□ -1.39
VAPA-203ENST00000577539 P4HBP07237 508 aaKnown RBP6.35□□□□□ -1.39
VAPA-203ENST00000577539 BLOC1S2Q6QNY1 142 aa6.35□□□□□ -1.39
VAPA-203ENST00000577539 TSEN2Q8NCE0 465 aaKnown RBP6.35□□□□□ -1.39
VAPA-203ENST00000577539 ZNF496Q96IT1 587 aaPredicted RBP6.35□□□□□ -1.39
VAPA-203ENST00000577539 WBP1LQ9NX94 342 aa6.35□□□□□ -1.39
VAPA-203ENST00000577539 CCDC171Q6TFL3 1326 aa6.35□□□□□ -1.39
VAPA-203ENST00000577539 TNFRSF10BO14763 440 aa6.35□□□□□ -1.39
VAPA-203ENST00000577539 F13A1P00488 732 aa6.35□□□□□ -1.39
VAPA-203ENST00000577539 LSM11P83369 360 aaKnown RBP eCLIP6.35□□□□□ -1.39
VAPA-203ENST00000577539 DNM1Q05193 864 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms