RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 LDLRAD1Q5T700 205 aa11.12□□□□□ -0.63
NPLOC4-204ENST00000570324 NBPF12Q5TAG4 269 aaPredicted RBP11.12□□□□□ -0.63
NPLOC4-204ENST00000570324 VGLL2Q8N8G2 317 aa11.12□□□□□ -0.63
NPLOC4-204ENST00000570324 TEKT1Q969V4 418 aa11.12□□□□□ -0.63
NPLOC4-204ENST00000570324 FBXO3Q9UK99 471 aa11.12□□□□□ -0.63
NPLOC4-204ENST00000570324 LRRFIP2Q9Y608 721 aaKnown RBP11.12□□□□□ -0.63
NPLOC4-204ENST00000570324 MANSC4A6NHS7 340 aaPredicted RBP11.11□□□□□ -0.63
NPLOC4-204ENST00000570324 CIAO1O76071 339 aa11.11□□□□□ -0.63
NPLOC4-204ENST00000570324 TBC1D8O95759 1140 aa11.11□□□□□ -0.63
NPLOC4-204ENST00000570324 IL15P40933 162 aaPredicted RBP11.11□□□□□ -0.63
NPLOC4-204ENST00000570324 TM4SF4P48230 202 aa11.11□□□□□ -0.63
NPLOC4-204ENST00000570324 RFX5P48382 616 aaPredicted RBP11.11□□□□□ -0.63
NPLOC4-204ENST00000570324 INHBEP58166 350 aa11.11□□□□□ -0.63
NPLOC4-204ENST00000570324 HDLBPQ00341 1268 aaKnown RBP11.11□□□□□ -0.63
NPLOC4-204ENST00000570324 ATP2B3Q16720 1220 aa11.11□□□□□ -0.63
NPLOC4-204ENST00000570324 SPRYD7Q5W111 196 aa11.11□□□□□ -0.63
NPLOC4-204ENST00000570324 WDR66Q8TBY9 1149 aa11.11□□□□□ -0.63
NPLOC4-204ENST00000570324 ARHGAP45Q92619 1136 aa11.11□□□□□ -0.63
NPLOC4-204ENST00000570324 PCNTO95613 3336 aa11.11□□□□□ -0.63
NPLOC4-204ENST00000570324 ARAP2Q8WZ64 1704 aa11.1□□□□□ -0.63
NPLOC4-204ENST00000570324 UNCXA6NJT0 531 aa11.1□□□□□ -0.63
NPLOC4-204ENST00000570324 ALDH1A1P00352 501 aa11.1□□□□□ -0.63
NPLOC4-204ENST00000570324 ZBTB48P10074 688 aaPredicted RBP11.1□□□□□ -0.63
NPLOC4-204ENST00000570324 FGFR2P21802 821 aa11.1□□□□□ -0.63
NPLOC4-204ENST00000570324 HNRNPUQ00839 825 aaKnown RBP eCLIP11.1□□□□□ -0.63
NPLOC4-204ENST00000570324 MAP3K11Q16584 847 aa11.1□□□□□ -0.63
NPLOC4-204ENST00000570324 DIEXFQ68CQ4 756 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-204ENST00000570324 ANKRD13AQ8IZ07 590 aa11.1□□□□□ -0.63
NPLOC4-204ENST00000570324 MEIS3Q99687 375 aa11.1□□□□□ -0.63
NPLOC4-204ENST00000570324 SUGT1Q9Y2Z0 365 aa11.1□□□□□ -0.63
NPLOC4-204ENST00000570324 AOX1Q06278 1338 aa11.09□□□□□ -0.63
NPLOC4-204ENST00000570324 SRGAP3O43295 1099 aa11.09□□□□□ -0.63
NPLOC4-204ENST00000570324 USP2O75604 605 aaPredicted RBP11.09□□□□□ -0.63
NPLOC4-204ENST00000570324 GRIK5Q16478 980 aa11.09□□□□□ -0.63
NPLOC4-204ENST00000570324 INTS3Q68E01 1043 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-204ENST00000570324 OTUD7BQ6GQQ9 843 aa11.09□□□□□ -0.63
NPLOC4-204ENST00000570324 ATG9AQ7Z3C6 839 aa11.09□□□□□ -0.63
NPLOC4-204ENST00000570324 CTU1Q7Z7A3 348 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-204ENST00000570324 HOOK2Q96ED9 719 aa11.09□□□□□ -0.63
NPLOC4-204ENST00000570324 WNK4Q96J92 1243 aa11.09□□□□□ -0.63
NPLOC4-204ENST00000570324 CLMNQ96JQ2 1002 aa11.09□□□□□ -0.63
NPLOC4-204ENST00000570324 PA2G4Q9UQ80 394 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-204ENST00000570324 MYH13Q9UKX3 1938 aa11.08□□□□□ -0.64
NPLOC4-204ENST00000570324 LDHBP07195 334 aaKnown RBP11.08□□□□□ -0.64
NPLOC4-204ENST00000570324 CACNB3P54284 484 aa11.08□□□□□ -0.64
NPLOC4-204ENST00000570324 HHIPL2Q6UWX4 724 aa11.08□□□□□ -0.64
NPLOC4-204ENST00000570324 ATF7IPQ6VMQ6 1270 aa11.08□□□□□ -0.64
NPLOC4-204ENST00000570324 ZNF296Q8WUU4 475 aaPredicted RBP11.08□□□□□ -0.64
NPLOC4-204ENST00000570324 CLUAP1Q96AJ1 413 aa11.08□□□□□ -0.64
NPLOC4-204ENST00000570324 ZDHHC15Q96MV8 337 aa11.08□□□□□ -0.64
NPLOC4-204ENST00000570324 MRIQ9BWK5 157 aa11.08□□□□□ -0.64
NPLOC4-204ENST00000570324 TMEM39BQ9GZU3 492 aa11.08□□□□□ -0.64
NPLOC4-204ENST00000570324 ELP3Q9H9T3 547 aa11.08□□□□□ -0.64
NPLOC4-204ENST00000570324 COPRSQ9NQ92 184 aa11.08□□□□□ -0.64
NPLOC4-204ENST00000570324 DENND2AQ9ULE3 1009 aa11.08□□□□□ -0.64
NPLOC4-204ENST00000570324 CSADQ9Y600 493 aa11.08□□□□□ -0.64
NPLOC4-204ENST00000570324 SSC5DA1L4H1 1573 aa11.07□□□□□ -0.64
NPLOC4-204ENST00000570324 GPR25O00155 361 aa11.07□□□□□ -0.64
NPLOC4-204ENST00000570324 SEMA3EO15041 775 aa11.07□□□□□ -0.64
NPLOC4-204ENST00000570324 FKTNO75072 461 aa11.07□□□□□ -0.64
NPLOC4-204ENST00000570324 BCAR3O75815 825 aa11.07□□□□□ -0.64
NPLOC4-204ENST00000570324 GNAI2P04899 355 aa11.07□□□□□ -0.64
NPLOC4-204ENST00000570324 MAP3K9P80192 1104 aa11.07□□□□□ -0.64
NPLOC4-204ENST00000570324 MLLT1Q03111 559 aaPredicted RBP11.07□□□□□ -0.64
NPLOC4-204ENST00000570324 GORABQ5T7V8 394 aa11.07□□□□□ -0.64
NPLOC4-204ENST00000570324 MIER1Q8N108 512 aa11.07□□□□□ -0.64
NPLOC4-204ENST00000570324 ZGPATQ8N5A5 531 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-204ENST00000570324 AKAP2Q9Y2D5 859 aa11.07□□□□□ -0.64
NPLOC4-204ENST00000570324 TRIM27P14373 513 aa11.06□□□□□ -0.64
NPLOC4-204ENST00000570324 G3BP1Q13283 466 aaKnown RBP eCLIP11.06□□□□□ -0.64
NPLOC4-204ENST00000570324 PKN2Q16513 984 aaKnown RBP11.06□□□□□ -0.64
NPLOC4-204ENST00000570324 FKBP1CQ5VVH2 108 aa11.06□□□□□ -0.64
NPLOC4-204ENST00000570324 ZKSCAN2Q63HK3 967 aa11.06□□□□□ -0.64
NPLOC4-204ENST00000570324 DCAF15Q66K64 600 aa11.06□□□□□ -0.64
NPLOC4-204ENST00000570324 FAM83AQ86UY5 434 aa11.06□□□□□ -0.64
NPLOC4-204ENST00000570324 IFNL1Q8IU54 200 aa11.06□□□□□ -0.64
NPLOC4-204ENST00000570324 OPTNQ96CV9 577 aa11.06□□□□□ -0.64
NPLOC4-204ENST00000570324 NEUROD6Q96NK8 337 aa11.06□□□□□ -0.64
NPLOC4-204ENST00000570324 WDHD1O75717 1129 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-204ENST00000570324 PHKA1P46020 1223 aa11.05□□□□□ -0.64
NPLOC4-204ENST00000570324 TIMM10P62072 90 aa11.05□□□□□ -0.64
NPLOC4-204ENST00000570324 TFCP2Q12800 502 aa11.05□□□□□ -0.64
NPLOC4-204ENST00000570324 MVPQ14764 893 aaKnown RBP11.05□□□□□ -0.64
NPLOC4-204ENST00000570324 NOM1Q5C9Z4 860 aaKnown RBP11.05□□□□□ -0.64
NPLOC4-204ENST00000570324 CCDC102BQ68D86 513 aa11.05□□□□□ -0.64
NPLOC4-204ENST00000570324 APOBEC3HQ6NTF7 200 aaKnown RBP11.05□□□□□ -0.64
NPLOC4-204ENST00000570324 SLF2Q8IX21 1173 aa11.05□□□□□ -0.64
NPLOC4-204ENST00000570324 FTSJ3Q8IY81 847 aaKnown RBP11.05□□□□□ -0.64
NPLOC4-204ENST00000570324 TEPSINQ96N21 525 aa11.05□□□□□ -0.64
NPLOC4-204ENST00000570324 ABCF2Q9UG63 623 aa11.05□□□□□ -0.64
NPLOC4-204ENST00000570324 A0A1B0GUL7 405 aa11.04□□□□□ -0.64
NPLOC4-204ENST00000570324 PRDX5P30044 214 aa11.04□□□□□ -0.64
NPLOC4-204ENST00000570324 TCP10Q12799 353 aa11.04□□□□□ -0.64
NPLOC4-204ENST00000570324 OS9Q13438 667 aaPredicted RBP11.04□□□□□ -0.64
NPLOC4-204ENST00000570324 DIXDC1Q155Q3 683 aa11.04□□□□□ -0.64
NPLOC4-204ENST00000570324 SPTY2D1Q68D10 685 aaPredicted RBP11.04□□□□□ -0.64
NPLOC4-204ENST00000570324 DZIP1Q86YF9 867 aaKnown RBP11.04□□□□□ -0.64
NPLOC4-204ENST00000570324 CDAN1Q8IWY9 1227 aa11.04□□□□□ -0.64
NPLOC4-204ENST00000570324 OTUD5Q96G74 571 aa11.04□□□□□ -0.64
NPLOC4-204ENST00000570324 WRNIP1Q96S55 665 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms