RNA–Protein interactions for RNA: ENST00000568796.1

PKD1-236, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 447 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-236ENST00000568796 PTPN18Q99952 460 aa19.41■□□□□ 0.7
PKD1-236ENST00000568796 PTPN22Q9Y2R2 807 aa19.41■□□□□ 0.7
PKD1-236ENST00000568796 POTEFA5A3E0 1075 aa19.4■□□□□ 0.7
PKD1-236ENST00000568796 TMEM39BQ9GZU3 492 aa19.4■□□□□ 0.7
PKD1-236ENST00000568796 CNKSR2Q8WXI2 1034 aa19.39■□□□□ 0.69
PKD1-236ENST00000568796 CSADQ9Y600 493 aa19.39■□□□□ 0.69
PKD1-236ENST00000568796 MROH5Q6ZUA9 1318 aa19.39■□□□□ 0.69
PKD1-236ENST00000568796 TESPA1A2RU30 521 aaPredicted RBP19.38■□□□□ 0.69
PKD1-236ENST00000568796 NBPF7P0C2Y1 421 aaPredicted RBP19.38■□□□□ 0.69
PKD1-236ENST00000568796 MAP3K9P80192 1104 aa19.38■□□□□ 0.69
PKD1-236ENST00000568796 KIAA0100Q14667 2235 aaKnown RBP19.38■□□□□ 0.69
PKD1-236ENST00000568796 METTL24Q5JXM2 366 aa19.38■□□□□ 0.69
PKD1-236ENST00000568796 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.38■□□□□ 0.69
PKD1-236ENST00000568796 FAM9BQ8IZU0 186 aa19.38■□□□□ 0.69
PKD1-236ENST00000568796 TEPSINQ96N21 525 aa19.38■□□□□ 0.69
PKD1-236ENST00000568796 RIPOR2Q9Y4F9 1068 aa19.38■□□□□ 0.69
PKD1-236ENST00000568796 CCL15-CCL14A0A0B4J2E2 113 aa19.37■□□□□ 0.69
PKD1-236ENST00000568796 GTF2A2P52657 109 aa19.37■□□□□ 0.69
PKD1-236ENST00000568796 VGLL4Q14135 290 aa19.37■□□□□ 0.69
PKD1-236ENST00000568796 TAF1CQ15572 869 aaPredicted RBP19.37■□□□□ 0.69
PKD1-236ENST00000568796 CCL15Q16663 113 aa19.37■□□□□ 0.69
PKD1-236ENST00000568796 CAVIN4Q5BKX8 364 aa19.37■□□□□ 0.69
PKD1-236ENST00000568796 OTUD5Q96G74 571 aa19.37■□□□□ 0.69
PKD1-236ENST00000568796 KAZALD1Q96I82 304 aa19.37■□□□□ 0.69
PKD1-236ENST00000568796 MS4A4AQ96JQ5 239 aa19.37■□□□□ 0.69
PKD1-236ENST00000568796 BICC1Q9H694 974 aaKnown RBP19.37■□□□□ 0.69
PKD1-236ENST00000568796 ZFYVE28Q9HCC9 887 aa19.37■□□□□ 0.69
PKD1-236ENST00000568796 CACNB3P54284 484 aa19.36■□□□□ 0.69
PKD1-236ENST00000568796 GRIK5Q16478 980 aa19.36■□□□□ 0.69
PKD1-236ENST00000568796 LRRC24Q50LG9 513 aa19.36■□□□□ 0.69
PKD1-236ENST00000568796 BRI3BPQ8WY22 251 aa19.36■□□□□ 0.69
PKD1-236ENST00000568796 TEKT1Q969V4 418 aa19.36■□□□□ 0.69
PKD1-236ENST00000568796 GCC1Q96CN9 775 aa19.36■□□□□ 0.69
PKD1-236ENST00000568796 ARHGEF6Q15052 776 aa19.35■□□□□ 0.69
PKD1-236ENST00000568796 FBXO33Q7Z6M2 555 aa19.35■□□□□ 0.69
PKD1-236ENST00000568796 TBC1D22AQ8WUA7 517 aa19.35■□□□□ 0.69
PKD1-236ENST00000568796 TMEM106CQ9BVX2 250 aa19.35■□□□□ 0.69
PKD1-236ENST00000568796 TMOD2Q9NZR1 351 aa19.35■□□□□ 0.69
PKD1-236ENST00000568796 OTOFQ9HC10 1997 aa19.34■□□□□ 0.69
PKD1-236ENST00000568796 EN2P19622 333 aaPredicted RBP19.34■□□□□ 0.69
PKD1-236ENST00000568796 CAP1Q01518 475 aa19.34■□□□□ 0.69
PKD1-236ENST00000568796 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.34■□□□□ 0.692e-7■■■■■ 33.8
PKD1-236ENST00000568796 ARMC5Q96C12 935 aa19.34■□□□□ 0.69
PKD1-236ENST00000568796 WDHD1O75717 1129 aaPredicted RBP19.33■□□□□ 0.68
PKD1-236ENST00000568796 BCAMP50895 628 aa19.33■□□□□ 0.68
PKD1-236ENST00000568796 FAM43AQ8N2R8 423 aa19.33■□□□□ 0.68
PKD1-236ENST00000568796 HTTP42858 3142 aa19.33■□□□□ 0.68
PKD1-236ENST00000568796 LAMB1P07942 1786 aa19.32■□□□□ 0.68
PKD1-236ENST00000568796 HDLBPQ00341 1268 aaKnown RBP19.32■□□□□ 0.68
PKD1-236ENST00000568796 RABL6Q3YEC7 729 aaPredicted RBP19.32■□□□□ 0.68
PKD1-236ENST00000568796 SLC9C1Q4G0N8 1177 aa19.32■□□□□ 0.68
PKD1-236ENST00000568796 ANKRD44Q8N8A2 993 aa19.32■□□□□ 0.68
PKD1-236ENST00000568796 KLHDC4Q8TBB5 520 aa19.32■□□□□ 0.68
PKD1-236ENST00000568796 WRNIP1Q96S55 665 aa19.32■□□□□ 0.68
PKD1-236ENST00000568796 UTYO14607 1347 aa19.31■□□□□ 0.68
PKD1-236ENST00000568796 PDE8BO95263 885 aa19.31■□□□□ 0.68
PKD1-236ENST00000568796 MYCP01106 439 aaPredicted RBP19.31■□□□□ 0.68
PKD1-236ENST00000568796 NBPF11Q86T75 865 aa19.31■□□□□ 0.68
PKD1-236ENST00000568796 PTCH2Q9Y6C5 1203 aa19.31■□□□□ 0.68
PKD1-236ENST00000568796 SPDYE5A6NIY4 337 aa19.3■□□□□ 0.68
PKD1-236ENST00000568796 IFIT1P09914 478 aaKnown RBP19.3■□□□□ 0.68
PKD1-236ENST00000568796 CETPP11597 493 aa19.3■□□□□ 0.68
PKD1-236ENST00000568796 KIF22Q14807 665 aa19.3■□□□□ 0.68
PKD1-236ENST00000568796 SLC4A8Q2Y0W8 1093 aa19.3■□□□□ 0.68
PKD1-236ENST00000568796 ZKSCAN4Q969J2 545 aaPredicted RBP19.3■□□□□ 0.68
PKD1-236ENST00000568796 HOOK2Q96ED9 719 aa19.3■□□□□ 0.68
PKD1-236ENST00000568796 ZDHHC15Q96MV8 337 aa19.3■□□□□ 0.68
PKD1-236ENST00000568796 ARAP2Q8WZ64 1704 aa19.3■□□□□ 0.68
PKD1-236ENST00000568796 CENPFP49454 3210 aa19.3■□□□□ 0.68
PKD1-236ENST00000568796 MAST3O60307 1309 aa19.29■□□□□ 0.68
PKD1-236ENST00000568796 MKI67P46013 3256 aaKnown RBP19.29■□□□□ 0.68
PKD1-236ENST00000568796 ECM2O94769 699 aaPredicted RBP19.29■□□□□ 0.68
PKD1-236ENST00000568796 DCAF15Q66K64 600 aa19.29■□□□□ 0.68
PKD1-236ENST00000568796 ERO1BQ86YB8 467 aa19.29■□□□□ 0.68
PKD1-236ENST00000568796 MRPL50Q8N5N7 158 aaKnown RBP19.29■□□□□ 0.68
PKD1-236ENST00000568796 VGLL2Q8N8G2 317 aa19.29■□□□□ 0.68
PKD1-236ENST00000568796 ZNF333Q96JL9 665 aa19.29■□□□□ 0.68
PKD1-236ENST00000568796 SNCAIPQ9Y6H5 919 aa19.29■□□□□ 0.68
PKD1-236ENST00000568796 IRF6O14896 467 aa19.28■□□□□ 0.68
PKD1-236ENST00000568796 ZEB1P37275 1124 aaPredicted RBP19.28■□□□□ 0.68
PKD1-236ENST00000568796 SNAPC2Q13487 334 aa19.28■□□□□ 0.68
PKD1-236ENST00000568796 PUM3Q15397 648 aaKnown RBP19.28■□□□□ 0.68
PKD1-236ENST00000568796 APOBEC3HQ6NTF7 200 aaKnown RBP19.28■□□□□ 0.68
PKD1-236ENST00000568796 MIGA2Q7L4E1 593 aa19.28■□□□□ 0.68
PKD1-236ENST00000568796 FAM83AQ86UY5 434 aa19.28■□□□□ 0.68
PKD1-236ENST00000568796 BTBD19C9JJ37 291 aa19.27■□□□□ 0.68
PKD1-236ENST00000568796 HABP4Q5JVS0 413 aaKnown RBP19.27■□□□□ 0.68
PKD1-236ENST00000568796 MRIQ9BWK5 157 aa19.27■□□□□ 0.68
PKD1-236ENST00000568796 SUGT1Q9Y2Z0 365 aa19.27■□□□□ 0.68
PKD1-236ENST00000568796 PTPRCP08575 1304 aa19.26■□□□□ 0.67
PKD1-236ENST00000568796 TLR2O60603 784 aa19.26■□□□□ 0.67
PKD1-236ENST00000568796 SLC5A1P13866 664 aa19.26■□□□□ 0.67
PKD1-236ENST00000568796 PPIL2Q13356 520 aa19.26■□□□□ 0.67
PKD1-236ENST00000568796 HHIPL2Q6UWX4 724 aa19.26■□□□□ 0.67
PKD1-236ENST00000568796 ZNF341Q9BYN7 854 aa19.26■□□□□ 0.67
PKD1-236ENST00000568796 ARHGAP39Q9C0H5 1083 aa19.26■□□□□ 0.67
PKD1-236ENST00000568796 LACTBP83111 547 aaPredicted RBP19.25■□□□□ 0.67
PKD1-236ENST00000568796 TCP10Q12799 353 aa19.25■□□□□ 0.67
PKD1-236ENST00000568796 FKBP1CQ5VVH2 108 aa19.25■□□□□ 0.67
PKD1-236ENST00000568796 WDR66Q8TBY9 1149 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms