RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 DZIP1LQ8IYY4 767 aaKnown RBP16.98■□□□□ 0.31
COMMD4-214ENST00000566230 FAM84BQ96KN1 310 aaPredicted RBP16.98■□□□□ 0.31
COMMD4-214ENST00000566230 CNNM1Q9NRU3 951 aa16.98■□□□□ 0.31
COMMD4-214ENST00000566230 SERPINA10Q9UK55 444 aa16.98■□□□□ 0.31
COMMD4-214ENST00000566230 TTF2Q9UNY4 1162 aaKnown RBP16.98■□□□□ 0.31
COMMD4-214ENST00000566230 EXOSC9Q06265 439 aaKnown RBP16.97■□□□□ 0.31
COMMD4-214ENST00000566230 TNFAIP1Q13829 316 aa16.97■□□□□ 0.31
COMMD4-214ENST00000566230 GRIK5Q16478 980 aa16.97■□□□□ 0.31
COMMD4-214ENST00000566230 DIEXFQ68CQ4 756 aaKnown RBP16.97■□□□□ 0.31
COMMD4-214ENST00000566230 FAM9BQ8IZU0 186 aa16.97■□□□□ 0.31
COMMD4-214ENST00000566230 ZNF333Q96JL9 665 aa16.97■□□□□ 0.31
COMMD4-214ENST00000566230 TMEM39BQ9GZU3 492 aa16.97■□□□□ 0.31
COMMD4-214ENST00000566230 ZSWIM8A7E2V4 1837 aa16.96■□□□□ 0.31
COMMD4-214ENST00000566230 TCP10L2B9ZVM9 353 aa16.96■□□□□ 0.31
COMMD4-214ENST00000566230 GRM8O00222 908 aa16.96■□□□□ 0.31
COMMD4-214ENST00000566230 HIBADHP31937 336 aaKnown RBP16.96■□□□□ 0.31
COMMD4-214ENST00000566230 MAP3K9P80192 1104 aa16.96■□□□□ 0.31
COMMD4-214ENST00000566230 VGLL4Q14135 290 aa16.96■□□□□ 0.31
COMMD4-214ENST00000566230 UBE4AQ14139 1066 aa16.96■□□□□ 0.31
COMMD4-214ENST00000566230 TAF7LQ5H9L4 462 aa16.96■□□□□ 0.31
COMMD4-214ENST00000566230 PUS3Q9BZE2 481 aaKnown RBP16.96■□□□□ 0.31
COMMD4-214ENST00000566230 TRIOBPQ9H2D6 2365 aa16.95■□□□□ 0.3
COMMD4-214ENST00000566230 CCL15-CCL14A0A0B4J2E2 113 aa16.95■□□□□ 0.3
COMMD4-214ENST00000566230 CRKP46108 304 aa16.95■□□□□ 0.3
COMMD4-214ENST00000566230 TAF1CQ15572 869 aaPredicted RBP16.95■□□□□ 0.3
COMMD4-214ENST00000566230 CCL15Q16663 113 aa16.95■□□□□ 0.3
COMMD4-214ENST00000566230 FAM43AQ8N2R8 423 aa16.95■□□□□ 0.3
COMMD4-214ENST00000566230 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.95■□□□□ 0.3
COMMD4-214ENST00000566230 PTCH2Q9Y6C5 1203 aa16.95■□□□□ 0.3
COMMD4-214ENST00000566230 GTF2A2P52657 109 aa16.94■□□□□ 0.3
COMMD4-214ENST00000566230 KAZALD1Q96I82 304 aa16.94■□□□□ 0.3
COMMD4-214ENST00000566230 TMEM106CQ9BVX2 250 aa16.94■□□□□ 0.3
COMMD4-214ENST00000566230 ZFYVE28Q9HCC9 887 aa16.94■□□□□ 0.3
COMMD4-214ENST00000566230 WDR63Q8IWG1 891 aa16.93■□□□□ 0.3
COMMD4-214ENST00000566230 OTUD5Q96G74 571 aa16.93■□□□□ 0.3
COMMD4-214ENST00000566230 SPINK5Q9NQ38 1064 aaPredicted RBP16.93■□□□□ 0.3
COMMD4-214ENST00000566230 SALL2Q9Y467 1007 aaPredicted RBP16.93■□□□□ 0.3
COMMD4-214ENST00000566230 RIPOR2Q9Y4F9 1068 aa16.93■□□□□ 0.3
COMMD4-214ENST00000566230 ALDH1L1O75891 902 aa16.92■□□□□ 0.3
COMMD4-214ENST00000566230 FXR1P51114 621 aaKnown RBP eCLIP16.92■□□□□ 0.3
COMMD4-214ENST00000566230 SLC9C1Q4G0N8 1177 aa16.92■□□□□ 0.3
COMMD4-214ENST00000566230 FBXO33Q7Z6M2 555 aa16.92■□□□□ 0.3
COMMD4-214ENST00000566230 SUCLG2Q96I99 432 aa16.92■□□□□ 0.3
COMMD4-214ENST00000566230 C9orf78Q9NZ63 289 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-214ENST00000566230 IQSEC3Q9UPP2 1182 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-214ENST00000566230 SPDYE5A6NIY4 337 aa16.91■□□□□ 0.3
COMMD4-214ENST00000566230 TNNI2P48788 182 aa16.91■□□□□ 0.3
COMMD4-214ENST00000566230 CACNB3P54284 484 aa16.91■□□□□ 0.3
COMMD4-214ENST00000566230 ARHGEF6Q15052 776 aa16.91■□□□□ 0.3
COMMD4-214ENST00000566230 ARHGAP39Q9C0H5 1083 aa16.91■□□□□ 0.3
COMMD4-214ENST00000566230 CSADQ9Y600 493 aa16.91■□□□□ 0.3
COMMD4-214ENST00000566230 SNCAIPQ9Y6H5 919 aa16.91■□□□□ 0.3
COMMD4-214ENST00000566230 HDLBPQ00341 1268 aaKnown RBP16.9■□□□□ 0.3
COMMD4-214ENST00000566230 NBPF11Q86T75 865 aa16.9■□□□□ 0.3
COMMD4-214ENST00000566230 COLQQ9Y215 455 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-214ENST00000566230 BTBD19C9JJ37 291 aa16.89■□□□□ 0.29
COMMD4-214ENST00000566230 TLR2O60603 784 aa16.89■□□□□ 0.29
COMMD4-214ENST00000566230 MYCP01106 439 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-214ENST00000566230 NBPF7P0C2Y1 421 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-214ENST00000566230 CHAF1AQ13111 956 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-214ENST00000566230 SLC4A8Q2Y0W8 1093 aa16.89■□□□□ 0.29
COMMD4-214ENST00000566230 SLC4A10Q6U841 1118 aa16.89■□□□□ 0.29
COMMD4-214ENST00000566230 ZKSCAN4Q969J2 545 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-214ENST00000566230 SRCIN1Q9C0H9 1055 aa16.89■□□□□ 0.29
COMMD4-214ENST00000566230 IRF6O14896 467 aa16.88■□□□□ 0.29
COMMD4-214ENST00000566230 CETPP11597 493 aa16.88■□□□□ 0.29
COMMD4-214ENST00000566230 LACTBP83111 547 aaPredicted RBP16.88■□□□□ 0.29
COMMD4-214ENST00000566230 LRRC24Q50LG9 513 aa16.88■□□□□ 0.29
COMMD4-214ENST00000566230 ERO1BQ86YB8 467 aa16.88■□□□□ 0.29
COMMD4-214ENST00000566230 SH3TC2Q8TF17 1288 aa16.88■□□□□ 0.29
COMMD4-214ENST00000566230 MROH5Q6ZUA9 1318 aa16.88■□□□□ 0.29
COMMD4-214ENST00000566230 APOBEC3HQ6NTF7 200 aaKnown RBP16.87■□□□□ 0.29
COMMD4-214ENST00000566230 VGLL2Q8N8G2 317 aa16.87■□□□□ 0.29
COMMD4-214ENST00000566230 TBC1D22AQ8WUA7 517 aa16.87■□□□□ 0.29
COMMD4-214ENST00000566230 TEKT1Q969V4 418 aa16.87■□□□□ 0.29
COMMD4-214ENST00000566230 ZDHHC15Q96MV8 337 aa16.87■□□□□ 0.29
COMMD4-214ENST00000566230 WRNIP1Q96S55 665 aa16.87■□□□□ 0.29
COMMD4-214ENST00000566230 MRIQ9BWK5 157 aa16.87■□□□□ 0.29
COMMD4-214ENST00000566230 ZCCHC17Q9NP64 241 aaKnown RBP16.87■□□□□ 0.29
COMMD4-214ENST00000566230 UTYO14607 1347 aa16.87■□□□□ 0.29
COMMD4-214ENST00000566230 H0YGN5 161 aa16.86■□□□□ 0.29
COMMD4-214ENST00000566230 CTGFP29279 349 aa16.86■□□□□ 0.29
COMMD4-214ENST00000566230 BCAMP50895 628 aa16.86■□□□□ 0.29
COMMD4-214ENST00000566230 PPIL2Q13356 520 aa16.86■□□□□ 0.29
COMMD4-214ENST00000566230 SNAPC2Q13487 334 aa16.86■□□□□ 0.29
COMMD4-214ENST00000566230 RABL6Q3YEC7 729 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-214ENST00000566230 FKBP1CQ5VVH2 108 aa16.86■□□□□ 0.29
COMMD4-214ENST00000566230 FAM83AQ86UY5 434 aa16.86■□□□□ 0.29
COMMD4-214ENST00000566230 VPS37DQ86XT2 251 aa16.86■□□□□ 0.29
COMMD4-214ENST00000566230 MIER1Q8N108 512 aa16.86■□□□□ 0.29
COMMD4-214ENST00000566230 ANKRD44Q8N8A2 993 aa16.86■□□□□ 0.29
COMMD4-214ENST00000566230 BICC1Q9H694 974 aaKnown RBP16.86■□□□□ 0.29
COMMD4-214ENST00000566230 AK9Q5TCS8 1911 aa16.86■□□□□ 0.29
COMMD4-214ENST00000566230 PDE8BO95263 885 aa16.85■□□□□ 0.29
COMMD4-214ENST00000566230 KIF22Q14807 665 aa16.85■□□□□ 0.29
COMMD4-214ENST00000566230 CAVIN4Q5BKX8 364 aa16.85■□□□□ 0.29
COMMD4-214ENST00000566230 C17orf99Q6UX52 265 aa16.85■□□□□ 0.29
COMMD4-214ENST00000566230 MYH13Q9UKX3 1938 aa16.84■□□□□ 0.29
COMMD4-214ENST00000566230 FRAT2O75474 233 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-214ENST00000566230 WDHD1O75717 1129 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms