RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 SLC10A4Q96EP9 437 aa18.95■□□□□ 0.62
CMTM3-212ENST00000566121 ZDHHC15Q96MV8 337 aa18.95■□□□□ 0.62
CMTM3-212ENST00000566121 ANGEL1Q9UNK9 670 aaKnown RBP18.95■□□□□ 0.62
CMTM3-212ENST00000566121 MAST3O60307 1309 aa18.95■□□□□ 0.62
CMTM3-212ENST00000566121 MANSC4A6NHS7 340 aaPredicted RBP18.94■□□□□ 0.62
CMTM3-212ENST00000566121 GNAI3P08754 354 aa18.94■□□□□ 0.62
CMTM3-212ENST00000566121 SLC5A1P13866 664 aa18.94■□□□□ 0.62
CMTM3-212ENST00000566121 IREB2P48200 963 aaKnown RBP18.94■□□□□ 0.62
CMTM3-212ENST00000566121 BCAMP50895 628 aa18.94■□□□□ 0.62
CMTM3-212ENST00000566121 FAM83AQ86UY5 434 aa18.94■□□□□ 0.62
CMTM3-212ENST00000566121 KLHDC4Q8TBB5 520 aa18.94■□□□□ 0.62
CMTM3-212ENST00000566121 TEPSINQ96N21 525 aa18.94■□□□□ 0.62
CMTM3-212ENST00000566121 PCDHAC2Q9Y5I4 1007 aa18.94■□□□□ 0.62
CMTM3-212ENST00000566121 SSC5DA1L4H1 1573 aa18.93■□□□□ 0.62
CMTM3-212ENST00000566121 SEMA3EO15041 775 aa18.93■□□□□ 0.62
CMTM3-212ENST00000566121 USP2O75604 605 aaPredicted RBP18.93■□□□□ 0.62
CMTM3-212ENST00000566121 TNNI2P48788 182 aa18.93■□□□□ 0.62
CMTM3-212ENST00000566121 RBM5P52756 815 aaKnown RBP eCLIP18.93■□□□□ 0.62
CMTM3-212ENST00000566121 PKN2Q16513 984 aaKnown RBP18.93■□□□□ 0.62
CMTM3-212ENST00000566121 NBPF12Q5TAG4 269 aaPredicted RBP18.93■□□□□ 0.62
CMTM3-212ENST00000566121 TEKT1Q969V4 418 aa18.93■□□□□ 0.62
CMTM3-212ENST00000566121 CEP126Q9P2H0 1117 aa18.93■□□□□ 0.62
CMTM3-212ENST00000566121 ARAP2Q8WZ64 1704 aa18.93■□□□□ 0.62
CMTM3-212ENST00000566121 CLRN2A0PK11 232 aa18.92■□□□□ 0.62
CMTM3-212ENST00000566121 TESPA1A2RU30 521 aaPredicted RBP18.92■□□□□ 0.62
CMTM3-212ENST00000566121 FRAT2O75474 233 aaPredicted RBP18.92■□□□□ 0.62
CMTM3-212ENST00000566121 DGKZQ13574 1117 aa18.92■□□□□ 0.62
CMTM3-212ENST00000566121 ANKRD13AQ8IZ07 590 aa18.92■□□□□ 0.62
CMTM3-212ENST00000566121 VEZTQ9HBM0 779 aa18.92■□□□□ 0.62
CMTM3-212ENST00000566121 JAG2Q9Y219 1238 aa18.92■□□□□ 0.62
CMTM3-212ENST00000566121 AOX1Q06278 1338 aa18.92■□□□□ 0.62
CMTM3-212ENST00000566121 SALL1Q9NSC2 1324 aa18.92■□□□□ 0.62
CMTM3-212ENST00000566121 APOBEC3HQ6NTF7 200 aaKnown RBP18.91■□□□□ 0.62
CMTM3-212ENST00000566121 CTU1Q7Z7A3 348 aaKnown RBP18.91■□□□□ 0.62
CMTM3-212ENST00000566121 HOOK2Q96ED9 719 aa18.91■□□□□ 0.62
CMTM3-212ENST00000566121 TDRD3Q9H7E2 651 aaKnown RBP18.91■□□□□ 0.62
CMTM3-212ENST00000566121 GNL3LQ9NVN8 582 aaKnown RBP18.91■□□□□ 0.62
CMTM3-212ENST00000566121 PDS5AQ29RF7 1337 aaKnown RBP18.91■□□□□ 0.62
CMTM3-212ENST00000566121 GRIK5Q16478 980 aa18.9■□□□□ 0.62
CMTM3-212ENST00000566121 LRRFIP2Q9Y608 721 aaKnown RBP18.9■□□□□ 0.62
CMTM3-212ENST00000566121 LAMB1P07942 1786 aa18.9■□□□□ 0.62
CMTM3-212ENST00000566121 ATP2B3Q16720 1220 aa18.89■□□□□ 0.61
CMTM3-212ENST00000566121 ATF7IPQ6VMQ6 1270 aa18.89■□□□□ 0.61
CMTM3-212ENST00000566121 WNK4Q96J92 1243 aa18.89■□□□□ 0.61
CMTM3-212ENST00000566121 GPR25O00155 361 aa18.88■□□□□ 0.61
CMTM3-212ENST00000566121 CHAF1AQ13111 956 aaPredicted RBP18.88■□□□□ 0.61
CMTM3-212ENST00000566121 MEIS3Q99687 375 aa18.88■□□□□ 0.61
CMTM3-212ENST00000566121 DENND2AQ9ULE3 1009 aa18.88■□□□□ 0.61
CMTM3-212ENST00000566121 RPAP1Q9BWH6 1393 aaPredicted RBP18.88■□□□□ 0.61
CMTM3-212ENST00000566121 TRIM27P14373 513 aa18.87■□□□□ 0.61
CMTM3-212ENST00000566121 MAP3K9P80192 1104 aa18.87■□□□□ 0.61
CMTM3-212ENST00000566121 PRKG1Q13976 671 aa18.87■□□□□ 0.61
CMTM3-212ENST00000566121 IFNL1Q8IU54 200 aa18.87■□□□□ 0.61
CMTM3-212ENST00000566121 IQSEC3Q9UPP2 1182 aaPredicted RBP18.87■□□□□ 0.61
CMTM3-212ENST00000566121 OTUD7BQ6GQQ9 843 aa18.86■□□□□ 0.61
CMTM3-212ENST00000566121 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.86■□□□□ 0.61
CMTM3-212ENST00000566121 ZGPATQ8N5A5 531 aaKnown RBP18.86■□□□□ 0.61
CMTM3-212ENST00000566121 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.86■□□□□ 0.61
CMTM3-212ENST00000566121 ZNF296Q8WUU4 475 aaPredicted RBP18.86■□□□□ 0.61
CMTM3-212ENST00000566121 FAM163AQ96GL9 167 aaPredicted RBP18.86■□□□□ 0.61
CMTM3-212ENST00000566121 CLMNQ96JQ2 1002 aa18.86■□□□□ 0.61
CMTM3-212ENST00000566121 TMOD2Q9NZR1 351 aa18.86■□□□□ 0.61
CMTM3-212ENST00000566121 AKAP2Q9Y2D5 859 aa18.86■□□□□ 0.61
CMTM3-212ENST00000566121 CCDC85CA6NKD9 419 aa18.85■□□□□ 0.61
CMTM3-212ENST00000566121 TBC1D8O95759 1140 aa18.85■□□□□ 0.61
CMTM3-212ENST00000566121 TMEM39BQ9GZU3 492 aa18.85■□□□□ 0.61
CMTM3-212ENST00000566121 FKTNO75072 461 aa18.84■□□□□ 0.61
CMTM3-212ENST00000566121 GNAI2P04899 355 aa18.84■□□□□ 0.61
CMTM3-212ENST00000566121 FAM151AQ8WW52 585 aa18.84■□□□□ 0.61
CMTM3-212ENST00000566121 MS4A4AQ96JQ5 239 aa18.84■□□□□ 0.61
CMTM3-212ENST00000566121 TCP10L2B9ZVM9 353 aa18.83■□□□□ 0.6
CMTM3-212ENST00000566121 SRGAP3O43295 1099 aa18.83■□□□□ 0.6
CMTM3-212ENST00000566121 IGSF3O75054 1194 aa18.83■□□□□ 0.6
CMTM3-212ENST00000566121 GJA5P36382 358 aa18.83■□□□□ 0.6
CMTM3-212ENST00000566121 SIL1Q9H173 461 aa18.83■□□□□ 0.6
CMTM3-212ENST00000566121 ZCCHC17Q9NP64 241 aaKnown RBP18.83■□□□□ 0.6
CMTM3-212ENST00000566121 FZD1Q9UP38 647 aa18.83■□□□□ 0.6
CMTM3-212ENST00000566121 LDHBP07195 334 aaKnown RBP18.82■□□□□ 0.6
CMTM3-212ENST00000566121 CCDC102BQ68D86 513 aa18.82■□□□□ 0.6
CMTM3-212ENST00000566121 PA2G4Q9UQ80 394 aaKnown RBP18.82■□□□□ 0.6
CMTM3-212ENST00000566121 DAGLAQ9Y4D2 1042 aa18.82■□□□□ 0.6
CMTM3-212ENST00000566121 IGF2BP3O00425 579 aaKnown RBP eCLIP18.81■□□□□ 0.6
CMTM3-212ENST00000566121 BCAR3O75815 825 aa18.81■□□□□ 0.6
CMTM3-212ENST00000566121 MAP4K4O95819 1239 aaPredicted RBP18.81■□□□□ 0.6
CMTM3-212ENST00000566121 GTF2A2P52657 109 aa18.81■□□□□ 0.6
CMTM3-212ENST00000566121 MLLT1Q03111 559 aaPredicted RBP18.81■□□□□ 0.6
CMTM3-212ENST00000566121 ZKSCAN2Q63HK3 967 aa18.81■□□□□ 0.6
CMTM3-212ENST00000566121 DCAF15Q66K64 600 aa18.81■□□□□ 0.6
CMTM3-212ENST00000566121 SLF2Q8IX21 1173 aa18.81■□□□□ 0.6
CMTM3-212ENST00000566121 GPR108Q9NPR9 543 aa18.81■□□□□ 0.6
CMTM3-212ENST00000566121 ZNF112Q9UJU3 913 aa18.81■□□□□ 0.6
CMTM3-212ENST00000566121 GAKO14976 1311 aa18.8■□□□□ 0.6
CMTM3-212ENST00000566121 SPDYE5A6NIY4 337 aa18.8■□□□□ 0.6
CMTM3-212ENST00000566121 PHKA1P46020 1223 aa18.8■□□□□ 0.6
CMTM3-212ENST00000566121 MAP3K10Q02779 954 aa18.8■□□□□ 0.6
CMTM3-212ENST00000566121 MKRN3Q13064 507 aaKnown RBP18.8■□□□□ 0.6
CMTM3-212ENST00000566121 VGLL4Q14135 290 aa18.8■□□□□ 0.6
CMTM3-212ENST00000566121 MVPQ14764 893 aaKnown RBP18.8■□□□□ 0.6
CMTM3-212ENST00000566121 SPTY2D1Q68D10 685 aaPredicted RBP18.8■□□□□ 0.6
CMTM3-212ENST00000566121 FBXO46Q6PJ61 603 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms