RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 RBM5P52756 815 aaKnown RBP eCLIP23.66■■□□□ 1.38
NME3-207ENST00000564628 TNFAIP1Q13829 316 aa23.66■■□□□ 1.38
NME3-207ENST00000564628 UBE4AQ14139 1066 aa23.66■■□□□ 1.38
NME3-207ENST00000564628 RASA3Q14644 834 aa23.66■■□□□ 1.38
NME3-207ENST00000564628 OTUD7BQ6GQQ9 843 aa23.66■■□□□ 1.38
NME3-207ENST00000564628 ANKRD13AQ8IZ07 590 aa23.66■■□□□ 1.38
NME3-207ENST00000564628 TDRD7Q8NHU6 1098 aaKnown RBP23.66■■□□□ 1.38
NME3-207ENST00000564628 SERPINA10Q9UK55 444 aa23.66■■□□□ 1.38
NME3-207ENST00000564628 JAG2Q9Y219 1238 aa23.66■■□□□ 1.38
NME3-207ENST00000564628 PLIN1O60240 522 aa23.65■■□□□ 1.38
NME3-207ENST00000564628 USP2O75604 605 aaPredicted RBP23.65■■□□□ 1.38
NME3-207ENST00000564628 MFSD14BQ5SR56 506 aa23.65■■□□□ 1.38
NME3-207ENST00000564628 TRIM17Q9Y577 477 aa23.65■■□□□ 1.38
NME3-207ENST00000564628 TESPA1A2RU30 521 aaPredicted RBP23.64■■□□□ 1.37
NME3-207ENST00000564628 SPDYE2Q495Y8 402 aa23.64■■□□□ 1.37
NME3-207ENST00000564628 OTOP1Q7RTM1 612 aa23.64■■□□□ 1.37
NME3-207ENST00000564628 HIBADHP31937 336 aaKnown RBP23.63■■□□□ 1.37
NME3-207ENST00000564628 GJA5P36382 358 aa23.63■■□□□ 1.37
NME3-207ENST00000564628 ERO1AQ96HE7 468 aa23.63■■□□□ 1.37
NME3-207ENST00000564628 MEIS3Q99687 375 aa23.63■■□□□ 1.37
NME3-207ENST00000564628 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.63■■□□□ 1.37
NME3-207ENST00000564628 TTF2Q9UNY4 1162 aaKnown RBP23.63■■□□□ 1.37
NME3-207ENST00000564628 ARAP2Q8WZ64 1704 aa23.62■■□□□ 1.37
NME3-207ENST00000564628 UBTFL1P0CB47 393 aaPredicted RBP23.62■■□□□ 1.37
NME3-207ENST00000564628 ZNF70Q9UC06 446 aaPredicted RBP23.62■■□□□ 1.37
NME3-207ENST00000564628 GYG1P46976 350 aa23.61■■□□□ 1.37
NME3-207ENST00000564628 CRHR2Q13324 411 aa23.61■■□□□ 1.37
NME3-207ENST00000564628 CLUAP1Q96AJ1 413 aa23.61■■□□□ 1.37
NME3-207ENST00000564628 FAM84BQ96KN1 310 aaPredicted RBP23.61■■□□□ 1.37
NME3-207ENST00000564628 OTOFQ9HC10 1997 aa23.6■■□□□ 1.37
NME3-207ENST00000564628 TEPSINQ96N21 525 aa23.6■■□□□ 1.37
NME3-207ENST00000564628 PTPN18Q99952 460 aa23.6■■□□□ 1.37
NME3-207ENST00000564628 MROH5Q6ZUA9 1318 aa23.59■■□□□ 1.37
NME3-207ENST00000564628 HTTP42858 3142 aa23.59■■□□□ 1.37
NME3-207ENST00000564628 CENPBP07199 599 aaPredicted RBP23.59■■□□□ 1.37
NME3-207ENST00000564628 DZIP1LQ8IYY4 767 aaKnown RBP23.59■■□□□ 1.37
NME3-207ENST00000564628 TMEM57Q8N5G2 664 aa23.59■■□□□ 1.37
NME3-207ENST00000564628 OPTNQ96CV9 577 aa23.59■■□□□ 1.37
NME3-207ENST00000564628 TDRD3Q9H7E2 651 aaKnown RBP23.59■■□□□ 1.37
NME3-207ENST00000564628 PTPN22Q9Y2R2 807 aa23.59■■□□□ 1.37
NME3-207ENST00000564628 RIPOR2Q9Y4F9 1068 aa23.59■■□□□ 1.37
NME3-207ENST00000564628 GNAI3P08754 354 aa23.58■■□□□ 1.37
NME3-207ENST00000564628 PUS3Q9BZE2 481 aaKnown RBP23.58■■□□□ 1.37
NME3-207ENST00000564628 ELP3Q9H9T3 547 aa23.58■■□□□ 1.37
NME3-207ENST00000564628 RCAN3Q9UKA8 241 aa23.58■■□□□ 1.37
NME3-207ENST00000564628 HDAC5Q9UQL6 1122 aa23.58■■□□□ 1.37
NME3-207ENST00000564628 LRRFIP2Q9Y608 721 aaKnown RBP23.58■■□□□ 1.37
NME3-207ENST00000564628 RLBP1P12271 317 aa23.57■■□□□ 1.36
NME3-207ENST00000564628 CRKP46108 304 aa23.57■■□□□ 1.36
NME3-207ENST00000564628 RFX5P48382 616 aaPredicted RBP23.57■■□□□ 1.36
NME3-207ENST00000564628 TNNI2P48788 182 aa23.57■■□□□ 1.36
NME3-207ENST00000564628 SP3Q02447 781 aa23.57■■□□□ 1.36
NME3-207ENST00000564628 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.57■■□□□ 1.36
NME3-207ENST00000564628 CD99L2Q8TCZ2 262 aa23.57■■□□□ 1.36
NME3-207ENST00000564628 MS4A4AQ96JQ5 239 aa23.57■■□□□ 1.36
NME3-207ENST00000564628 RBBP6Q7Z6E9 1792 aaKnown RBP23.57■■□□□ 1.36
NME3-207ENST00000564628 HDLBPQ00341 1268 aaKnown RBP23.56■■□□□ 1.36
NME3-207ENST00000564628 FBXO33Q7Z6M2 555 aa23.56■■□□□ 1.36
NME3-207ENST00000564628 ARMC5Q96C12 935 aa23.56■■□□□ 1.36
NME3-207ENST00000564628 EFCC1Q9HA90 598 aa23.56■■□□□ 1.36
NME3-207ENST00000564628 CDAN1Q8IWY9 1227 aa23.55■■□□□ 1.36
NME3-207ENST00000564628 FTSJ3Q8IY81 847 aaKnown RBP23.55■■□□□ 1.36
NME3-207ENST00000564628 TBC1D22AQ8WUA7 517 aa23.55■■□□□ 1.36
NME3-207ENST00000564628 GCC1Q96CN9 775 aa23.55■■□□□ 1.36
NME3-207ENST00000564628 POTEFA5A3E0 1075 aa23.54■■□□□ 1.36
NME3-207ENST00000564628 TCP10L2B9ZVM9 353 aa23.54■■□□□ 1.36
NME3-207ENST00000564628 GTF2A2P52657 109 aa23.54■■□□□ 1.36
NME3-207ENST00000564628 MAP3K9P80192 1104 aa23.54■■□□□ 1.36
NME3-207ENST00000564628 VPS37DQ86XT2 251 aa23.54■■□□□ 1.36
NME3-207ENST00000564628 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.54■■□□□ 1.362e-7■■■■□ 21.2
NME3-207ENST00000564628 TMEM39BQ9GZU3 492 aa23.54■■□□□ 1.36
NME3-207ENST00000564628 MTX1Q13505 466 aa23.53■■□□□ 1.36
NME3-207ENST00000564628 VGLL4Q14135 290 aa23.53■■□□□ 1.36
NME3-207ENST00000564628 CAVIN4Q5BKX8 364 aa23.53■■□□□ 1.36
NME3-207ENST00000564628 BRI3BPQ8WY22 251 aa23.53■■□□□ 1.36
NME3-207ENST00000564628 ARHGEF6Q15052 776 aa23.52■■□□□ 1.36
NME3-207ENST00000564628 KLHDC4Q8TBB5 520 aa23.52■■□□□ 1.36
NME3-207ENST00000564628 MRIQ9BWK5 157 aa23.52■■□□□ 1.36
NME3-207ENST00000564628 CSADQ9Y600 493 aa23.52■■□□□ 1.36
NME3-207ENST00000564628 CCL15-CCL14A0A0B4J2E2 113 aa23.51■■□□□ 1.35
NME3-207ENST00000564628 GRIK5Q16478 980 aa23.51■■□□□ 1.35
NME3-207ENST00000564628 CCL15Q16663 113 aa23.51■■□□□ 1.35
NME3-207ENST00000564628 LRRC24Q50LG9 513 aa23.51■■□□□ 1.35
NME3-207ENST00000564628 VGLL2Q8N8G2 317 aa23.51■■□□□ 1.35
NME3-207ENST00000564628 CNKSR2Q8WXI2 1034 aa23.51■■□□□ 1.35
NME3-207ENST00000564628 TEKT1Q969V4 418 aa23.51■■□□□ 1.35
NME3-207ENST00000564628 ZFYVE28Q9HCC9 887 aa23.51■■□□□ 1.35
NME3-207ENST00000564628 PDE8BO95263 885 aa23.5■■□□□ 1.35
NME3-207ENST00000564628 GNAI2P04899 355 aa23.5■■□□□ 1.35
NME3-207ENST00000564628 CAP1Q01518 475 aa23.5■■□□□ 1.35
NME3-207ENST00000564628 TAF1CQ15572 869 aaPredicted RBP23.5■■□□□ 1.35
NME3-207ENST00000564628 METTL24Q5JXM2 366 aa23.5■■□□□ 1.35
NME3-207ENST00000564628 PANK1Q8TE04 598 aa23.5■■□□□ 1.35
NME3-207ENST00000564628 SPDYE5A6NIY4 337 aa23.49■■□□□ 1.35
NME3-207ENST00000564628 FRAT2O75474 233 aaPredicted RBP23.49■■□□□ 1.35
NME3-207ENST00000564628 MS4A1P11836 297 aa23.49■■□□□ 1.35
NME3-207ENST00000564628 CHAF1AQ13111 956 aaPredicted RBP23.49■■□□□ 1.35
NME3-207ENST00000564628 FKBP1CQ5VVH2 108 aa23.49■■□□□ 1.35
NME3-207ENST00000564628 FAM83AQ86UY5 434 aa23.49■■□□□ 1.35
NME3-207ENST00000564628 ITPRIPQ8IWB1 547 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms