RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 FZD1Q9UP38 647 aa20.95■□□□□ 0.94
CCNF-203ENST00000564236 USP2O75604 605 aaPredicted RBP20.94■□□□□ 0.94
CCNF-203ENST00000564236 CIAO1O76071 339 aa20.94■□□□□ 0.94
CCNF-203ENST00000564236 ALDH1A1P00352 501 aa20.94■□□□□ 0.94
CCNF-203ENST00000564236 IFIT1P09914 478 aaKnown RBP20.94■□□□□ 0.94
CCNF-203ENST00000564236 BCAMP50895 628 aa20.94■□□□□ 0.94
CCNF-203ENST00000564236 GRIK5Q16478 980 aa20.94■□□□□ 0.94
CCNF-203ENST00000564236 PKN2Q16513 984 aaKnown RBP20.94■□□□□ 0.94
CCNF-203ENST00000564236 ATG9AQ7Z3C6 839 aa20.94■□□□□ 0.94
CCNF-203ENST00000564236 ZNF296Q8WUU4 475 aaPredicted RBP20.94■□□□□ 0.94
CCNF-203ENST00000564236 LPIN2Q92539 896 aa20.94■□□□□ 0.94
CCNF-203ENST00000564236 ARHGAP45Q92619 1136 aa20.94■□□□□ 0.94
CCNF-203ENST00000564236 WNK4Q96J92 1243 aa20.94■□□□□ 0.94
CCNF-203ENST00000564236 API5Q9BZZ5 524 aaKnown RBP20.94■□□□□ 0.94
CCNF-203ENST00000564236 TDRD3Q9H7E2 651 aaKnown RBP20.94■□□□□ 0.94
CCNF-203ENST00000564236 NOB1Q9ULX3 412 aaKnown RBP20.94■□□□□ 0.94
CCNF-203ENST00000564236 GPR25O00155 361 aa20.93■□□□□ 0.94
CCNF-203ENST00000564236 TBC1D8O95759 1140 aa20.93■□□□□ 0.94
CCNF-203ENST00000564236 UBTFL1P0CB47 393 aaPredicted RBP20.93■□□□□ 0.94
CCNF-203ENST00000564236 IREB2P48200 963 aaKnown RBP20.93■□□□□ 0.94
CCNF-203ENST00000564236 ANKRD13AQ8IZ07 590 aa20.93■□□□□ 0.94
CCNF-203ENST00000564236 CLMNQ96JQ2 1002 aa20.93■□□□□ 0.94
CCNF-203ENST00000564236 ZDHHC15Q96MV8 337 aa20.93■□□□□ 0.94
CCNF-203ENST00000564236 HDAC5Q9UQL6 1122 aa20.93■□□□□ 0.94
CCNF-203ENST00000564236 RARSP54136 660 aaKnown RBP20.92■□□□□ 0.94
CCNF-203ENST00000564236 MKRN3Q13064 507 aaKnown RBP20.92■□□□□ 0.94
CCNF-203ENST00000564236 FKBP1CQ5VVH2 108 aa20.92■□□□□ 0.94
CCNF-203ENST00000564236 IQSEC3Q9UPP2 1182 aaPredicted RBP20.92■□□□□ 0.94
CCNF-203ENST00000564236 MAST3O60307 1309 aa20.92■□□□□ 0.94
CCNF-203ENST00000564236 SLC5A1P13866 664 aa20.91■□□□□ 0.94
CCNF-203ENST00000564236 MLLT1Q03111 559 aaPredicted RBP20.91■□□□□ 0.94
CCNF-203ENST00000564236 IFNL1Q8IU54 200 aa20.91■□□□□ 0.94
CCNF-203ENST00000564236 TEKT1Q969V4 418 aa20.91■□□□□ 0.94
CCNF-203ENST00000564236 TESPA1A2RU30 521 aaPredicted RBP20.9■□□□□ 0.94
CCNF-203ENST00000564236 FRAT2O75474 233 aaPredicted RBP20.9■□□□□ 0.94
CCNF-203ENST00000564236 TNNI2P48788 182 aa20.9■□□□□ 0.94
CCNF-203ENST00000564236 CHAF1AQ13111 956 aaPredicted RBP20.9■□□□□ 0.94
CCNF-203ENST00000564236 HHIPL2Q6UWX4 724 aa20.9■□□□□ 0.94
CCNF-203ENST00000564236 GJA5P36382 358 aa20.89■□□□□ 0.93
CCNF-203ENST00000564236 INTS3Q68E01 1043 aaKnown RBP20.89■□□□□ 0.93
CCNF-203ENST00000564236 APOBEC3HQ6NTF7 200 aaKnown RBP20.89■□□□□ 0.93
CCNF-203ENST00000564236 FAM83AQ86UY5 434 aa20.89■□□□□ 0.93
CCNF-203ENST00000564236 WDR66Q8TBY9 1149 aa20.89■□□□□ 0.93
CCNF-203ENST00000564236 COPRSQ9NQ92 184 aa20.89■□□□□ 0.93
CCNF-203ENST00000564236 RPAP1Q9BWH6 1393 aaPredicted RBP20.88■□□□□ 0.93
CCNF-203ENST00000564236 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.88■□□□□ 0.93
CCNF-203ENST00000564236 CDAN1Q8IWY9 1227 aa20.88■□□□□ 0.93
CCNF-203ENST00000564236 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.88■□□□□ 0.93
CCNF-203ENST00000564236 TMEM39BQ9GZU3 492 aa20.88■□□□□ 0.93
CCNF-203ENST00000564236 R3HDMLQ9H3Y0 253 aa20.88■□□□□ 0.93
CCNF-203ENST00000564236 TCP10L2B9ZVM9 353 aa20.87■□□□□ 0.93
CCNF-203ENST00000564236 IGF2BP3O00425 579 aaKnown RBP eCLIP20.87■□□□□ 0.93
CCNF-203ENST00000564236 FKTNO75072 461 aa20.87■□□□□ 0.93
CCNF-203ENST00000564236 IL15P40933 162 aaPredicted RBP20.87■□□□□ 0.93
CCNF-203ENST00000564236 LRRFIP2Q9Y608 721 aaKnown RBP20.87■□□□□ 0.93
CCNF-203ENST00000564236 SALL1Q9NSC2 1324 aa20.86■□□□□ 0.93
CCNF-203ENST00000564236 MTX1Q13505 466 aa20.86■□□□□ 0.93
CCNF-203ENST00000564236 MEIS3Q99687 375 aa20.86■□□□□ 0.93
CCNF-203ENST00000564236 CEP126Q9P2H0 1117 aa20.86■□□□□ 0.93
CCNF-203ENST00000564236 HPS5Q9UPZ3 1129 aa20.86■□□□□ 0.93
CCNF-203ENST00000564236 SEMA3EO15041 775 aa20.85■□□□□ 0.93
CCNF-203ENST00000564236 ATP2B3Q16720 1220 aa20.85■□□□□ 0.93
CCNF-203ENST00000564236 MS4A4AQ96JQ5 239 aa20.85■□□□□ 0.93
CCNF-203ENST00000564236 MAP3K9P80192 1104 aa20.84■□□□□ 0.93
CCNF-203ENST00000564236 VGLL4Q14135 290 aa20.84■□□□□ 0.93
CCNF-203ENST00000564236 FBXO46Q6PJ61 603 aaPredicted RBP20.84■□□□□ 0.93
CCNF-203ENST00000564236 OPTNQ96CV9 577 aa20.84■□□□□ 0.93
CCNF-203ENST00000564236 HOOK2Q96ED9 719 aa20.84■□□□□ 0.93
CCNF-203ENST00000564236 PTPN18Q99952 460 aa20.84■□□□□ 0.93
CCNF-203ENST00000564236 TMOD2Q9NZR1 351 aa20.84■□□□□ 0.93
CCNF-203ENST00000564236 OTOFQ9HC10 1997 aa20.84■□□□□ 0.93
CCNF-203ENST00000564236 GNAI3P08754 354 aa20.83■□□□□ 0.93
CCNF-203ENST00000564236 OTUD7BQ6GQQ9 843 aa20.83■□□□□ 0.93
CCNF-203ENST00000564236 SIL1Q9H173 461 aa20.83■□□□□ 0.93
CCNF-203ENST00000564236 PDS5AQ29RF7 1337 aaKnown RBP20.82■□□□□ 0.92
CCNF-203ENST00000564236 ELP3Q9H9T3 547 aa20.82■□□□□ 0.92
CCNF-203ENST00000564236 GNL3LQ9NVN8 582 aaKnown RBP20.82■□□□□ 0.92
CCNF-203ENST00000564236 SPDYE5A6NIY4 337 aa20.81■□□□□ 0.92
CCNF-203ENST00000564236 CACNB3P54284 484 aa20.81■□□□□ 0.92
CCNF-203ENST00000564236 DENND2AQ9ULE3 1009 aa20.81■□□□□ 0.92
CCNF-203ENST00000564236 PA2G4Q9UQ80 394 aaKnown RBP20.81■□□□□ 0.92
CCNF-203ENST00000564236 DAGLAQ9Y4D2 1042 aa20.81■□□□□ 0.92
CCNF-203ENST00000564236 IPO8O15397 1037 aaKnown RBP20.8■□□□□ 0.92
CCNF-203ENST00000564236 TRIM27P14373 513 aa20.8■□□□□ 0.92
CCNF-203ENST00000564236 PRDX5P30044 214 aa20.8■□□□□ 0.92
CCNF-203ENST00000564236 GTF2A2P52657 109 aa20.8■□□□□ 0.92
CCNF-203ENST00000564236 CRHR2Q13324 411 aa20.8■□□□□ 0.92
CCNF-203ENST00000564236 FAM151AQ8WW52 585 aa20.8■□□□□ 0.92
CCNF-203ENST00000564236 CSADQ9Y600 493 aa20.8■□□□□ 0.92
CCNF-203ENST00000564236 PHKA1P46020 1223 aa20.79■□□□□ 0.92
CCNF-203ENST00000564236 CCDC102BQ68D86 513 aa20.79■□□□□ 0.92
CCNF-203ENST00000564236 ATF7IPQ6VMQ6 1270 aa20.79■□□□□ 0.92
CCNF-203ENST00000564236 BRI3BPQ8WY22 251 aa20.79■□□□□ 0.92
CCNF-203ENST00000564236 SNCAIPQ9Y6H5 919 aa20.79■□□□□ 0.92
CCNF-203ENST00000564236 HTTP42858 3142 aa20.78■□□□□ 0.92
CCNF-203ENST00000564236 LDHBP07195 334 aaKnown RBP20.78■□□□□ 0.92
CCNF-203ENST00000564236 DCAF15Q66K64 600 aa20.78■□□□□ 0.92
CCNF-203ENST00000564236 CDC42EP5Q6NZY7 148 aa20.78■□□□□ 0.92
CCNF-203ENST00000564236 ERO1BQ86YB8 467 aa20.78■□□□□ 0.92
CCNF-203ENST00000564236 ZGPATQ8N5A5 531 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms