RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 DAB2P98082 770 aa8.25□□□□□ -1.09
USP8-218ENST00000561330 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.25□□□□□ -1.09
USP8-218ENST00000561330 UBASH3BQ8TF42 649 aa8.25□□□□□ -1.09
USP8-218ENST00000561330 GPN3Q9UHW5 284 aaPredicted RBP8.25□□□□□ -1.09
USP8-218ENST00000561330 PPM1HQ9ULR3 514 aa8.25□□□□□ -1.09
USP8-218ENST00000561330 ALX3O95076 343 aa8.24□□□□□ -1.09
USP8-218ENST00000561330 CYP11A1P05108 521 aa8.24□□□□□ -1.09
USP8-218ENST00000561330 NOS3P29474 1203 aa8.24□□□□□ -1.09
USP8-218ENST00000561330 PPP2R3AQ06190 1150 aa8.24□□□□□ -1.09
USP8-218ENST00000561330 TMC4Q7Z404 712 aa8.24□□□□□ -1.09
USP8-218ENST00000561330 SPOCK3Q9BQ16 436 aa8.24□□□□□ -1.09
USP8-218ENST00000561330 TMEM39AQ9NV64 488 aa8.24□□□□□ -1.09
USP8-218ENST00000561330 ITGAEP38570 1179 aa8.23□□□□□ -1.09
USP8-218ENST00000561330 KIAA1211Q6ZU35 1233 aa8.23□□□□□ -1.09
USP8-218ENST00000561330 AGGF1Q8N302 714 aaeCLIP8.23□□□□□ -1.09
USP8-218ENST00000561330 FAM161BQ96MY7 647 aa8.23□□□□□ -1.09
USP8-218ENST00000561330 RUSC1Q9BVN2 902 aa8.23□□□□□ -1.09
USP8-218ENST00000561330 CEP44Q9C0F1 390 aa8.23□□□□□ -1.09
USP8-218ENST00000561330 MRS2Q9HD23 443 aa8.23□□□□□ -1.09
USP8-218ENST00000561330 CCDC9Q9Y3X0 531 aaKnown RBP8.23□□□□□ -1.09
USP8-218ENST00000561330 LOC100289279A0A1B0GTE1 492 aa8.22□□□□□ -1.09
USP8-218ENST00000561330 MAOBP27338 520 aa8.22□□□□□ -1.09
USP8-218ENST00000561330 AP3B2Q13367 1082 aa8.22□□□□□ -1.09
USP8-218ENST00000561330 POU4F3Q15319 338 aa8.22□□□□□ -1.09
USP8-218ENST00000561330 CORO1BQ9BR76 489 aa8.22□□□□□ -1.09
USP8-218ENST00000561330 BCL11AQ9H165 835 aa8.22□□□□□ -1.09
USP8-218ENST00000561330 SORBS3O60504 671 aa8.21□□□□□ -1.1
USP8-218ENST00000561330 PROCP04070 461 aa8.21□□□□□ -1.1
USP8-218ENST00000561330 GLB1P16278 677 aa8.21□□□□□ -1.1
USP8-218ENST00000561330 TPTE2Q6XPS3 522 aa8.21□□□□□ -1.1
USP8-218ENST00000561330 ANKRD24Q8TF21 1146 aa8.21□□□□□ -1.1
USP8-218ENST00000561330 TRIM56Q9BRZ2 755 aaKnown RBP8.21□□□□□ -1.1
USP8-218ENST00000561330 NRSN2Q9GZP1 204 aa8.21□□□□□ -1.1
USP8-218ENST00000561330 RNF208Q9H0X6 261 aa8.21□□□□□ -1.1
USP8-218ENST00000561330 TTF2Q9UNY4 1162 aaKnown RBP8.21□□□□□ -1.1
USP8-218ENST00000561330 FBXO24O75426 580 aa8.2□□□□□ -1.1
USP8-218ENST00000561330 ZNF16P17020 682 aaPredicted RBP8.2□□□□□ -1.1
USP8-218ENST00000561330 HP1BP3Q5SSJ5 553 aaPredicted RBP8.2□□□□□ -1.1
USP8-218ENST00000561330 Q6ZS46 218 aa8.2□□□□□ -1.1
USP8-218ENST00000561330 NECAB3Q96P71 396 aaPredicted RBP8.2□□□□□ -1.1
USP8-218ENST00000561330 CEP41Q9BYV8 373 aa8.2□□□□□ -1.1
USP8-218ENST00000561330 VTI1BQ9UEU0 232 aa8.2□□□□□ -1.1
USP8-218ENST00000561330 MEGF11A6BM72 1044 aa8.19□□□□□ -1.1
USP8-218ENST00000561330 DLGAP3O95886 979 aa8.19□□□□□ -1.1
USP8-218ENST00000561330 EXOSC6Q5RKV6 272 aaKnown RBP8.18□□□□□ -1.1
USP8-218ENST00000561330 NUTM2GQ5VZR2 741 aa8.18□□□□□ -1.1
USP8-218ENST00000561330 ANKRD34AQ69YU3 496 aa8.18□□□□□ -1.1
USP8-218ENST00000561330 SULF2Q8IWU5 870 aa8.18□□□□□ -1.1
USP8-218ENST00000561330 MEGF10Q96KG7 1140 aa8.18□□□□□ -1.1
USP8-218ENST00000561330 TMPRSS13Q9BYE2 586 aa8.18□□□□□ -1.1
USP8-218ENST00000561330 SAMM50Q9Y512 469 aa8.18□□□□□ -1.1
USP8-218ENST00000561330 RBM47A0AV96 593 aaKnown RBP8.17□□□□□ -1.1
USP8-218ENST00000561330 ENC1O14682 589 aa8.17□□□□□ -1.1
USP8-218ENST00000561330 NME2P22392 152 aa8.17□□□□□ -1.1
USP8-218ENST00000561330 ARNTP27540 789 aa8.17□□□□□ -1.1
USP8-218ENST00000561330 DOC2BQ14184 412 aa8.17□□□□□ -1.1
USP8-218ENST00000561330 FDX2Q6P4F2 183 aa8.17□□□□□ -1.1
USP8-218ENST00000561330 DZIP1LQ8IYY4 767 aaKnown RBP8.17□□□□□ -1.1
USP8-218ENST00000561330 TP53INP1Q96A56 240 aa8.17□□□□□ -1.1
USP8-218ENST00000561330 SSBP4Q9BWG4 385 aaPredicted RBP8.17□□□□□ -1.1
USP8-218ENST00000561330 CYP4F12Q9HCS2 524 aa8.17□□□□□ -1.1
USP8-218ENST00000561330 TPSG1Q9NRR2 321 aa8.17□□□□□ -1.1
USP8-218ENST00000561330 SART1O43290 800 aaKnown RBP8.16□□□□□ -1.1
USP8-218ENST00000561330 ECEL1O95672 775 aa8.16□□□□□ -1.1
USP8-218ENST00000561330 CTSBP07858 339 aa8.16□□□□□ -1.1
USP8-218ENST00000561330 GSTP1P09211 210 aaKnown RBP8.16□□□□□ -1.1
USP8-218ENST00000561330 PDE3AQ14432 1141 aa8.16□□□□□ -1.1
USP8-218ENST00000561330 MEI1Q5TIA1 1274 aa8.16□□□□□ -1.1
USP8-218ENST00000561330 SV2BQ7L1I2 683 aa8.16□□□□□ -1.1
USP8-218ENST00000561330 C12orf50Q8NA57 414 aaPredicted RBP8.16□□□□□ -1.1
USP8-218ENST00000561330 RGS22Q8NE09 1264 aa8.16□□□□□ -1.1
USP8-218ENST00000561330 CRELD1Q96HD1 420 aa8.16□□□□□ -1.1
USP8-218ENST00000561330 UBL7Q96S82 380 aaPredicted RBP8.16□□□□□ -1.1
USP8-218ENST00000561330 EMILIN2Q9BXX0 1053 aa8.16□□□□□ -1.1
USP8-218ENST00000561330 ZC3H12CQ9C0D7 883 aaKnown RBP8.16□□□□□ -1.1
USP8-218ENST00000561330 SUGCTQ9HAC7 445 aa8.16□□□□□ -1.1
USP8-218ENST00000561330 RAD18Q9NS91 495 aa8.16□□□□□ -1.1
USP8-218ENST00000561330 PODXL2Q9NZ53 605 aa8.16□□□□□ -1.1
USP8-218ENST00000561330 CTSHP09668 335 aa8.15□□□□□ -1.1
USP8-218ENST00000561330 HNRNPUQ00839 825 aaKnown RBP eCLIP8.15□□□□□ -1.1
USP8-218ENST00000561330 TAF1CQ15572 869 aaPredicted RBP8.15□□□□□ -1.1
USP8-218ENST00000561330 CCDC85BQ15834 202 aaPredicted RBP8.15□□□□□ -1.1
USP8-218ENST00000561330 SMG8Q8ND04 991 aaKnown RBP8.15□□□□□ -1.1
USP8-218ENST00000561330 STK35Q8TDR2 534 aa8.15□□□□□ -1.1
USP8-218ENST00000561330 KCNB2Q92953 911 aa8.15□□□□□ -1.1
USP8-218ENST00000561330 CBX8Q9HC52 389 aa8.15□□□□□ -1.1
USP8-218ENST00000561330 PAGE1O75459 146 aa8.14□□□□□ -1.11
USP8-218ENST00000561330 CELA3AP09093 270 aa8.14□□□□□ -1.11
USP8-218ENST00000561330 ST13P50502 369 aaKnown RBP8.14□□□□□ -1.11
USP8-218ENST00000561330 PDZD3Q86UT5 571 aa8.14□□□□□ -1.11
USP8-218ENST00000561330 CCDC86Q9H6F5 360 aaKnown RBP8.14□□□□□ -1.11
USP8-218ENST00000561330 KRT82Q9NSB4 513 aa8.14□□□□□ -1.11
USP8-218ENST00000561330 LRRC14Q15048 493 aa8.13□□□□□ -1.11
USP8-218ENST00000561330 UVSSAQ2YD98 709 aa8.13□□□□□ -1.11
USP8-218ENST00000561330 FAM46AQ96IP4 442 aaKnown RBP8.13□□□□□ -1.11
USP8-218ENST00000561330 USP31Q70CQ4 1352 aa8.12□□□□□ -1.11
USP8-218ENST00000561330 GAS2O43903 313 aaKnown RBP8.12□□□□□ -1.11
USP8-218ENST00000561330 AOC2O75106 756 aa8.12□□□□□ -1.11
USP8-218ENST00000561330 TIAF1O95411 115 aa8.12□□□□□ -1.11
USP8-218ENST00000561330 LIG1P18858 919 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms