RNA–Protein interactions for RNA: ENST00000561321.1

SEMA4B-220, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-220ENST00000561321 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.32■□□□□ 0.04
SEMA4B-220ENST00000561321 COL1A1P02452 1464 aaPredicted RBP15.32■□□□□ 0.04
SEMA4B-220ENST00000561321 ARMC9Q7Z3E5 817 aa15.31■□□□□ 0.04
SEMA4B-220ENST00000561321 DZIP1LQ8IYY4 767 aaKnown RBP15.31■□□□□ 0.04
SEMA4B-220ENST00000561321 ZNF70Q9UC06 446 aaPredicted RBP15.31■□□□□ 0.04
SEMA4B-220ENST00000561321 ANGEL1Q9UNK9 670 aaKnown RBP15.31■□□□□ 0.04
SEMA4B-220ENST00000561321 CA12O43570 354 aa15.3■□□□□ 0.04
SEMA4B-220ENST00000561321 MKRN3Q13064 507 aaKnown RBP15.3■□□□□ 0.04
SEMA4B-220ENST00000561321 SPDYE2Q495Y8 402 aa15.3■□□□□ 0.04
SEMA4B-220ENST00000561321 TCP10L2B9ZVM9 353 aa15.29■□□□□ 0.04
SEMA4B-220ENST00000561321 ADORA1P30542 326 aa15.29■□□□□ 0.04
SEMA4B-220ENST00000561321 MTX1Q13505 466 aa15.29■□□□□ 0.04
SEMA4B-220ENST00000561321 RASA3Q14644 834 aa15.29■□□□□ 0.04
SEMA4B-220ENST00000561321 NBPF12Q5TAG4 269 aaPredicted RBP15.29■□□□□ 0.04
SEMA4B-220ENST00000561321 ITPRIPQ8IWB1 547 aa15.29■□□□□ 0.04
SEMA4B-220ENST00000561321 TEKT1Q969V4 418 aa15.29■□□□□ 0.04
SEMA4B-220ENST00000561321 CSRNP1Q96S65 589 aa15.29■□□□□ 0.04
SEMA4B-220ENST00000561321 GNL3LQ9NVN8 582 aaKnown RBP15.29■□□□□ 0.04
SEMA4B-220ENST00000561321 PPP2R3BQ9Y5P8 575 aa15.29■□□□□ 0.04
SEMA4B-220ENST00000561321 AKAP11Q9UKA4 1901 aa15.29■□□□□ 0.04
SEMA4B-220ENST00000561321 SSC5DA1L4H1 1573 aa15.28■□□□□ 0.04
SEMA4B-220ENST00000561321 PNMA6EA0A0J9YXQ4 647 aa15.28■□□□□ 0.04
SEMA4B-220ENST00000561321 PHKA1P46020 1223 aa15.28■□□□□ 0.04
SEMA4B-220ENST00000561321 TIMM10P62072 90 aa15.28■□□□□ 0.04
SEMA4B-220ENST00000561321 TFCP2Q12800 502 aa15.28■□□□□ 0.04
SEMA4B-220ENST00000561321 TNFAIP1Q13829 316 aa15.28■□□□□ 0.04
SEMA4B-220ENST00000561321 SUPT20HL1Q3ZLR7 823 aa15.28■□□□□ 0.04
SEMA4B-220ENST00000561321 WDR66Q8TBY9 1149 aa15.28■□□□□ 0.04
SEMA4B-220ENST00000561321 C1orf115Q9H7X2 142 aa15.28■□□□□ 0.04
SEMA4B-220ENST00000561321 CASP8AP2Q9UKL3 1982 aa15.27■□□□□ 0.04
SEMA4B-220ENST00000561321 MAST3O60307 1309 aa15.27■□□□□ 0.04
SEMA4B-220ENST00000561321 PPP1R12BO60237 982 aaPredicted RBP15.27■□□□□ 0.04
SEMA4B-220ENST00000561321 TRPA1O75762 1119 aa15.27■□□□□ 0.04
SEMA4B-220ENST00000561321 RLBP1P12271 317 aa15.27■□□□□ 0.04
SEMA4B-220ENST00000561321 HDLBPQ00341 1268 aaKnown RBP15.27■□□□□ 0.04
SEMA4B-220ENST00000561321 A0A1B0GUL7 405 aa15.26■□□□□ 0.03
SEMA4B-220ENST00000561321 CACNB3P54284 484 aa15.26■□□□□ 0.03
SEMA4B-220ENST00000561321 CCDC102BQ68D86 513 aa15.26■□□□□ 0.03
SEMA4B-220ENST00000561321 CDAN1Q8IWY9 1227 aa15.26■□□□□ 0.03
SEMA4B-220ENST00000561321 TMEM39BQ9GZU3 492 aa15.26■□□□□ 0.03
SEMA4B-220ENST00000561321 RNF186Q9NXI6 227 aa15.26■□□□□ 0.03
SEMA4B-220ENST00000561321 AKAP2Q9Y2D5 859 aa15.26■□□□□ 0.03
SEMA4B-220ENST00000561321 SUGT1Q9Y2Z0 365 aa15.26■□□□□ 0.03
SEMA4B-220ENST00000561321 TNNI2P48788 182 aa15.25■□□□□ 0.03
SEMA4B-220ENST00000561321 G3BP1Q13283 466 aaKnown RBP eCLIP15.25■□□□□ 0.03
SEMA4B-220ENST00000561321 LDLRAD1Q5T700 205 aa15.25■□□□□ 0.03
SEMA4B-220ENST00000561321 XAGE2Q96GT9 111 aa15.25■□□□□ 0.03
SEMA4B-220ENST00000561321 CLMNQ96JQ2 1002 aa15.25■□□□□ 0.03
SEMA4B-220ENST00000561321 ZDHHC15Q96MV8 337 aa15.25■□□□□ 0.03
SEMA4B-220ENST00000561321 NEUROD6Q96NK8 337 aa15.25■□□□□ 0.03
SEMA4B-220ENST00000561321 SAGE1Q9NXZ1 904 aa15.25■□□□□ 0.03
SEMA4B-220ENST00000561321 TMOD2Q9NZR1 351 aa15.25■□□□□ 0.03
SEMA4B-220ENST00000561321 DENND2AQ9ULE3 1009 aa15.25■□□□□ 0.03
SEMA4B-220ENST00000561321 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.25■□□□□ 0.03
SEMA4B-220ENST00000561321 LDHBP07195 334 aaKnown RBP15.24■□□□□ 0.03
SEMA4B-220ENST00000561321 PRDX5P30044 214 aa15.24■□□□□ 0.03
SEMA4B-220ENST00000561321 IREB2P48200 963 aaKnown RBP15.24■□□□□ 0.03
SEMA4B-220ENST00000561321 DIXDC1Q155Q3 683 aa15.24■□□□□ 0.03
SEMA4B-220ENST00000561321 APOBEC3HQ6NTF7 200 aaKnown RBP15.24■□□□□ 0.03
SEMA4B-220ENST00000561321 HHIPL2Q6UWX4 724 aa15.24■□□□□ 0.03
SEMA4B-220ENST00000561321 REM2Q8IYK8 340 aaPredicted RBP15.24■□□□□ 0.03
SEMA4B-220ENST00000561321 PANK1Q8TE04 598 aa15.24■□□□□ 0.03
SEMA4B-220ENST00000561321 SLC10A4Q96EP9 437 aa15.24■□□□□ 0.03
SEMA4B-220ENST00000561321 SEMA3EO15041 775 aa15.23■□□□□ 0.03
SEMA4B-220ENST00000561321 USP2O75604 605 aaPredicted RBP15.23■□□□□ 0.03
SEMA4B-220ENST00000561321 RASGRF1Q13972 1273 aa15.23■□□□□ 0.03
SEMA4B-220ENST00000561321 MAP3K11Q16584 847 aa15.23■□□□□ 0.03
SEMA4B-220ENST00000561321 GORABQ5T7V8 394 aa15.23■□□□□ 0.03
SEMA4B-220ENST00000561321 TEPSINQ96N21 525 aa15.23■□□□□ 0.03
SEMA4B-220ENST00000561321 MRIQ9BWK5 157 aa15.23■□□□□ 0.03
SEMA4B-220ENST00000561321 ZBTB7BO15156 539 aaPredicted RBP15.22■□□□□ 0.03
SEMA4B-220ENST00000561321 ATP8B2P98198 1209 aa15.22■□□□□ 0.03
SEMA4B-220ENST00000561321 OS9Q13438 667 aaPredicted RBP15.22■□□□□ 0.03
SEMA4B-220ENST00000561321 MVPQ14764 893 aaKnown RBP15.22■□□□□ 0.03
SEMA4B-220ENST00000561321 SPRYD7Q5W111 196 aa15.22■□□□□ 0.03
SEMA4B-220ENST00000561321 ABCF2Q9UG63 623 aa15.22■□□□□ 0.03
SEMA4B-220ENST00000561321 DAGLAQ9Y4D2 1042 aa15.22■□□□□ 0.03
SEMA4B-220ENST00000561321 OTOFQ9HC10 1997 aa15.22■□□□□ 0.03
SEMA4B-220ENST00000561321 SALL1Q9NSC2 1324 aa15.21■□□□□ 0.03
SEMA4B-220ENST00000561321 SREBF2Q12772 1141 aa15.21■□□□□ 0.03
SEMA4B-220ENST00000561321 POLA2Q14181 598 aa15.21■□□□□ 0.03
SEMA4B-220ENST00000561321 ZGPATQ8N5A5 531 aaKnown RBP15.21■□□□□ 0.03
SEMA4B-220ENST00000561321 SSH3Q8TE77 659 aa15.21■□□□□ 0.03
SEMA4B-220ENST00000561321 WNK4Q96J92 1243 aa15.21■□□□□ 0.03
SEMA4B-220ENST00000561321 MYH2Q9UKX2 1941 aa15.2■□□□□ 0.02
SEMA4B-220ENST00000561321 SURF6O75683 361 aaKnown RBP15.2■□□□□ 0.02
SEMA4B-220ENST00000561321 TM4SF4P48230 202 aa15.2■□□□□ 0.02
SEMA4B-220ENST00000561321 CDC42EP5Q6NZY7 148 aa15.2■□□□□ 0.02
SEMA4B-220ENST00000561321 DZIP1Q86YF9 867 aaKnown RBP15.2■□□□□ 0.02
SEMA4B-220ENST00000561321 ANKRD13AQ8IZ07 590 aa15.2■□□□□ 0.02
SEMA4B-220ENST00000561321 ELP3Q9H9T3 547 aa15.2■□□□□ 0.02
SEMA4B-220ENST00000561321 AK9Q5TCS8 1911 aa15.19■□□□□ 0.02
SEMA4B-220ENST00000561321 TBC1D8O95759 1140 aa15.19■□□□□ 0.02
SEMA4B-220ENST00000561321 TCP10Q12799 353 aa15.19■□□□□ 0.02
SEMA4B-220ENST00000561321 DGKZQ13574 1117 aa15.19■□□□□ 0.02
SEMA4B-220ENST00000561321 PI16Q6UXB8 463 aa15.19■□□□□ 0.02
SEMA4B-220ENST00000561321 FAM83AQ86UY5 434 aa15.19■□□□□ 0.02
SEMA4B-220ENST00000561321 ABHD8Q96I13 439 aa15.19■□□□□ 0.02
SEMA4B-220ENST00000561321 USP40Q9NVE5 1235 aa15.19■□□□□ 0.02
SEMA4B-220ENST00000561321 UNCXA6NJT0 531 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms