RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 CALCOCO2Q13137 446 aa14.25□□□□□ -0.13
SYNM-203ENST00000560674 SETDB1Q15047 1291 aa14.25□□□□□ -0.13
SYNM-203ENST00000560674 TMEM87AQ8NBN3 555 aa14.25□□□□□ -0.13
SYNM-203ENST00000560674 RAB3IL1Q8TBN0 382 aa14.25□□□□□ -0.13
SYNM-203ENST00000560674 KCNK9Q9NPC2 374 aa14.25□□□□□ -0.13
SYNM-203ENST00000560674 CCDC25Q86WR0 208 aa14.24□□□□□ -0.13
SYNM-203ENST00000560674 FMNL3Q8IVF7 1028 aa14.24□□□□□ -0.13
SYNM-203ENST00000560674 ATP2A2P16615 1042 aaKnown RBP14.24□□□□□ -0.13
SYNM-203ENST00000560674 CWF19L2Q2TBE0 894 aaKnown RBP14.24□□□□□ -0.13
SYNM-203ENST00000560674 HELLSQ9NRZ9 838 aa14.24□□□□□ -0.13
SYNM-203ENST00000560674 MCM9Q9NXL9 1143 aa14.24□□□□□ -0.13
SYNM-203ENST00000560674 POLKQ9UBT6 870 aa14.24□□□□□ -0.13
SYNM-203ENST00000560674 FANCAO15360 1455 aa14.24□□□□□ -0.13
SYNM-203ENST00000560674 KDM5BQ9UGL1 1544 aa14.24□□□□□ -0.13
SYNM-203ENST00000560674 F8W031 263 aaPredicted RBP14.24□□□□□ -0.13
SYNM-203ENST00000560674 RXRAP19793 462 aa14.24□□□□□ -0.13
SYNM-203ENST00000560674 ARL1P40616 181 aaPredicted RBP14.24□□□□□ -0.13
SYNM-203ENST00000560674 TERF1P54274 439 aa14.24□□□□□ -0.13
SYNM-203ENST00000560674 ZBTB9Q96C00 473 aa14.24□□□□□ -0.13
SYNM-203ENST00000560674 TCHPQ9BT92 498 aa14.24□□□□□ -0.13
SYNM-203ENST00000560674 PPP1R2P41236 205 aa14.24□□□□□ -0.13
SYNM-203ENST00000560674 CEBPAP49715 358 aaPredicted RBP14.24□□□□□ -0.13
SYNM-203ENST00000560674 TRIM14Q14142 442 aa14.24□□□□□ -0.13
SYNM-203ENST00000560674 MIGA1Q8NAN2 632 aa14.24□□□□□ -0.13
SYNM-203ENST00000560674 UBLCP1Q8WVY7 318 aaPredicted RBP14.24□□□□□ -0.13
SYNM-203ENST00000560674 DDX23Q9BUQ8 820 aaKnown RBP14.24□□□□□ -0.13
SYNM-203ENST00000560674 DENND4BO75064 1496 aaPredicted RBP14.24□□□□□ -0.13
SYNM-203ENST00000560674 APBB1IPQ7Z5R6 666 aaPredicted RBP14.23□□□□□ -0.13
SYNM-203ENST00000560674 RPS6KB1P23443 525 aa14.23□□□□□ -0.13
SYNM-203ENST00000560674 JAKMIP2Q96AA8 810 aa14.23□□□□□ -0.13
SYNM-203ENST00000560674 PLIN2Q99541 437 aa14.23□□□□□ -0.13
SYNM-203ENST00000560674 ITSN2Q9NZM3 1697 aa14.23□□□□□ -0.13
SYNM-203ENST00000560674 IGSF3O75054 1194 aa14.23□□□□□ -0.13
SYNM-203ENST00000560674 U2AF2P26368 475 aaKnown RBP eCLIP14.23□□□□□ -0.13
SYNM-203ENST00000560674 CCT6AP40227 531 aaKnown RBP14.23□□□□□ -0.13
SYNM-203ENST00000560674 ZNF354CQ86Y25 554 aa14.23□□□□□ -0.13
SYNM-203ENST00000560674 PRAG1Q86YV5 1406 aa14.23□□□□□ -0.13
SYNM-203ENST00000560674 CTNND2Q9UQB3 1225 aa14.23□□□□□ -0.13
SYNM-203ENST00000560674 NIP7Q9Y221 180 aaKnown RBP eCLIP14.23□□□□□ -0.13
SYNM-203ENST00000560674 GRIN2AQ12879 1464 aa14.23□□□□□ -0.13
SYNM-203ENST00000560674 PIK3C2GO75747 1445 aa14.23□□□□□ -0.13
SYNM-203ENST00000560674 TUBB2AQ13885 445 aa14.23□□□□□ -0.13
SYNM-203ENST00000560674 SEL1L2Q5TEA6 688 aa14.23□□□□□ -0.13
SYNM-203ENST00000560674 C10orf67Q8IYJ2 551 aa14.23□□□□□ -0.13
SYNM-203ENST00000560674 NAPGQ99747 312 aaPredicted RBP14.23□□□□□ -0.13
SYNM-203ENST00000560674 TUBB2BQ9BVA1 445 aa14.23□□□□□ -0.13
SYNM-203ENST00000560674 MSH6P52701 1360 aa14.23□□□□□ -0.13
SYNM-203ENST00000560674 VWA3AA6NCI4 1184 aa14.23□□□□□ -0.13
SYNM-203ENST00000560674 PLCG2P16885 1265 aa14.23□□□□□ -0.13
SYNM-203ENST00000560674 RPL13P26373 211 aaKnown RBP14.23□□□□□ -0.13
SYNM-203ENST00000560674 ATP6V1AP38606 617 aa14.23□□□□□ -0.13
SYNM-203ENST00000560674 IGSF22Q8N9C0 903 aa14.23□□□□□ -0.13
SYNM-203ENST00000560674 CCDC26Q8TAB7 109 aa14.23□□□□□ -0.13
SYNM-203ENST00000560674 ANAPC4Q9UJX5 808 aa14.23□□□□□ -0.13
SYNM-203ENST00000560674 RAPGEF1Q13905 1077 aa14.22□□□□□ -0.13
SYNM-203ENST00000560674 MSANTD4Q8NCY6 345 aa14.22□□□□□ -0.13
SYNM-203ENST00000560674 STIM2Q9P246 746 aa14.22□□□□□ -0.13
SYNM-203ENST00000560674 MAP3K5Q99683 1374 aa14.22□□□□□ -0.13
SYNM-203ENST00000560674 CFAP57Q96MR6 1250 aa14.22□□□□□ -0.13
SYNM-203ENST00000560674 HDAC9Q9UKV0 1011 aa14.22□□□□□ -0.13
SYNM-203ENST00000560674 RILPL1Q5EBL4 403 aa14.22□□□□□ -0.13
SYNM-203ENST00000560674 AFAP1L1Q8TED9 768 aa14.22□□□□□ -0.13
SYNM-203ENST00000560674 TTF2Q9UNY4 1162 aaKnown RBP14.22□□□□□ -0.13
SYNM-203ENST00000560674 FLT4P35916 1363 aa14.22□□□□□ -0.13
SYNM-203ENST00000560674 SV2BQ7L1I2 683 aa14.22□□□□□ -0.13
SYNM-203ENST00000560674 NOC4LQ9BVI4 516 aaKnown RBP14.22□□□□□ -0.13
SYNM-203ENST00000560674 RASSF4Q9H2L5 321 aa14.22□□□□□ -0.13
SYNM-203ENST00000560674 CEP83Q9Y592 693 aa14.22□□□□□ -0.13
SYNM-203ENST00000560674 CPA1P15085 419 aa14.22□□□□□ -0.13
SYNM-203ENST00000560674 MAP7D1Q3KQU3 841 aa14.22□□□□□ -0.13
SYNM-203ENST00000560674 KIAA1524Q8TCG1 905 aa14.22□□□□□ -0.13
SYNM-203ENST00000560674 SEC62Q99442 399 aaKnown RBP14.22□□□□□ -0.13
SYNM-203ENST00000560674 CLSTN2Q9H4D0 955 aa14.22□□□□□ -0.13
SYNM-203ENST00000560674 TXNDC16Q9P2K2 825 aa14.22□□□□□ -0.13
SYNM-203ENST00000560674 NDC80O14777 642 aa14.21□□□□□ -0.13
SYNM-203ENST00000560674 DCAF17Q5H9S7 520 aaPredicted RBP14.21□□□□□ -0.13
SYNM-203ENST00000560674 CCDC65Q8IXS2 484 aa14.21□□□□□ -0.13
SYNM-203ENST00000560674 NAP1L4Q99733 375 aaKnown RBP14.21□□□□□ -0.13
SYNM-203ENST00000560674 ALDH3A1P30838 453 aa14.21□□□□□ -0.13
SYNM-203ENST00000560674 SMAP1Q8IYB5 467 aaPredicted RBP14.21□□□□□ -0.13
SYNM-203ENST00000560674 BICC1Q9H694 974 aaKnown RBP14.21□□□□□ -0.13
SYNM-203ENST00000560674 PLCD1P51178 756 aa14.21□□□□□ -0.13
SYNM-203ENST00000560674 LACTBP83111 547 aaPredicted RBP14.21□□□□□ -0.13
SYNM-203ENST00000560674 ZNF174Q15697 407 aa14.21□□□□□ -0.13
SYNM-203ENST00000560674 CADPS2Q86UW7 1296 aa14.21□□□□□ -0.13
SYNM-203ENST00000560674 KRT24Q2M2I5 525 aa14.21□□□□□ -0.14
SYNM-203ENST00000560674 CYP26C1Q6V0L0 522 aa14.21□□□□□ -0.14
SYNM-203ENST00000560674 TTC16Q8NEE8 873 aa14.21□□□□□ -0.14
SYNM-203ENST00000560674 ZFYVE9O95405 1425 aa14.21□□□□□ -0.14
SYNM-203ENST00000560674 ATP5DP30049 168 aa14.2□□□□□ -0.14
SYNM-203ENST00000560674 KRBA2Q6ZNG9 492 aa14.2□□□□□ -0.14
SYNM-203ENST00000560674 NAP1L3Q99457 506 aaPredicted RBP14.2□□□□□ -0.14
SYNM-203ENST00000560674 NKIRAS1Q9NYS0 192 aa14.2□□□□□ -0.14
SYNM-203ENST00000560674 PSMC4P43686 418 aa14.2□□□□□ -0.14
SYNM-203ENST00000560674 VWA3BQ502W6 1294 aa14.2□□□□□ -0.14
SYNM-203ENST00000560674 ANO1Q5XXA6 986 aa14.2□□□□□ -0.14
SYNM-203ENST00000560674 RSRC1Q96IZ7 334 aaKnown RBP14.2□□□□□ -0.14
SYNM-203ENST00000560674 EIF2AK4Q9P2K8 1649 aaKnown RBP14.2□□□□□ -0.14
SYNM-203ENST00000560674 URB2Q14146 1524 aaKnown RBP14.2□□□□□ -0.14
SYNM-203ENST00000560674 IRS4O14654 1257 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms