RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 A0A1W2PPZ6 126 aa7.03□□□□□ -1.28
LRRC28-218ENST00000560236 PCDH1Q08174 1060 aa7.03□□□□□ -1.28
LRRC28-218ENST00000560236 MSMPQ1L6U9 139 aa7.03□□□□□ -1.28
LRRC28-218ENST00000560236 CLEC4MQ9H2X3 399 aaPredicted RBP7.03□□□□□ -1.28
LRRC28-218ENST00000560236 ADGRE2Q9UHX3 823 aa7.03□□□□□ -1.28
LRRC28-218ENST00000560236 CARNS1A5YM72 827 aa7.02□□□□□ -1.29
LRRC28-218ENST00000560236 CYP11A1P05108 521 aa7.02□□□□□ -1.29
LRRC28-218ENST00000560236 ADH5P11766 374 aa7.02□□□□□ -1.29
LRRC28-218ENST00000560236 MAOBP27338 520 aa7.02□□□□□ -1.29
LRRC28-218ENST00000560236 CCNJLQ8IV13 435 aa7.02□□□□□ -1.29
LRRC28-218ENST00000560236 SHISA5Q8N114 240 aa7.02□□□□□ -1.29
LRRC28-218ENST00000560236 TBC1D32Q96NH3 1257 aa7.02□□□□□ -1.29
LRRC28-218ENST00000560236 NRSN2Q9GZP1 204 aa7.02□□□□□ -1.29
LRRC28-218ENST00000560236 LIN7BQ9HAP6 207 aa7.02□□□□□ -1.29
LRRC28-218ENST00000560236 A0A1W2PP55 124 aa7.01□□□□□ -1.29
LRRC28-218ENST00000560236 ADMP35318 185 aa7.01□□□□□ -1.29
LRRC28-218ENST00000560236 GRIA4P48058 902 aa7.01□□□□□ -1.29
LRRC28-218ENST00000560236 ZNF423Q2M1K9 1284 aa7.01□□□□□ -1.29
LRRC28-218ENST00000560236 SPRED3Q2MJR0 410 aa7.01□□□□□ -1.29
LRRC28-218ENST00000560236 HP1BP3Q5SSJ5 553 aaPredicted RBP7.01□□□□□ -1.29
LRRC28-218ENST00000560236 ZAR1Q86SH2 424 aa7.01□□□□□ -1.29
LRRC28-218ENST00000560236 GALNT12Q8IXK2 581 aa7.01□□□□□ -1.29
LRRC28-218ENST00000560236 ABI1Q8IZP0 508 aa7.01□□□□□ -1.29
LRRC28-218ENST00000560236 EZH1Q92800 747 aaPredicted RBP7.01□□□□□ -1.29
LRRC28-218ENST00000560236 CCDC39Q9UFE4 941 aa7.01□□□□□ -1.29
LRRC28-218ENST00000560236 PRKAG2Q9UGJ0 569 aa7.01□□□□□ -1.29
LRRC28-218ENST00000560236 ABCC9O60706 1549 aa7.01□□□□□ -1.29
LRRC28-218ENST00000560236 CYP26A1O43174 497 aa7□□□□□ -1.29
LRRC28-218ENST00000560236 PRNPP04156 253 aa7□□□□□ -1.29
LRRC28-218ENST00000560236 YBX3P16989 372 aaKnown RBP eCLIP7□□□□□ -1.29
LRRC28-218ENST00000560236 POU4F3Q15319 338 aa7□□□□□ -1.29
LRRC28-218ENST00000560236 TCF12Q99081 682 aa7□□□□□ -1.29
LRRC28-218ENST00000560236 KRTAP9-9Q9BYP9 154 aa7□□□□□ -1.29
LRRC28-218ENST00000560236 KRTAP9-4Q9BYQ2 154 aa7□□□□□ -1.29
LRRC28-218ENST00000560236 ZFYVE1Q9HBF4 777 aa7□□□□□ -1.29
LRRC28-218ENST00000560236 ACTL7BQ9Y614 415 aa7□□□□□ -1.29
LRRC28-218ENST00000560236 RAB6AP20340 208 aa6.99□□□□□ -1.29
LRRC28-218ENST00000560236 AKAP4Q5JQC9 854 aa6.99□□□□□ -1.29
LRRC28-218ENST00000560236 VSIG10LQ86VR7 867 aa6.99□□□□□ -1.29
LRRC28-218ENST00000560236 DDX54Q8TDD1 881 aaKnown RBP6.99□□□□□ -1.29
LRRC28-218ENST00000560236 RAD18Q9NS91 495 aa6.99□□□□□ -1.29
LRRC28-218ENST00000560236 BRPF3Q9ULD4 1205 aa6.99□□□□□ -1.29
LRRC28-218ENST00000560236 FAM170BA6NMN3 283 aa6.98□□□□□ -1.29
LRRC28-218ENST00000560236 NEFLP07196 543 aa6.98□□□□□ -1.29
LRRC28-218ENST00000560236 NFICP08651 508 aa6.98□□□□□ -1.29
LRRC28-218ENST00000560236 MAP7Q14244 749 aa6.98□□□□□ -1.29
LRRC28-218ENST00000560236 DUSP27Q5VZP5 1158 aa6.98□□□□□ -1.29
LRRC28-218ENST00000560236 DYMQ7RTS9 669 aa6.98□□□□□ -1.29
LRRC28-218ENST00000560236 TP53INP2Q8IXH6 220 aa6.98□□□□□ -1.29
LRRC28-218ENST00000560236 FBXL18Q96ME1 805 aa6.98□□□□□ -1.29
LRRC28-218ENST00000560236 CORO1BQ9BR76 489 aa6.98□□□□□ -1.29
LRRC28-218ENST00000560236 BSDC1Q9NW68 430 aaPredicted RBP6.98□□□□□ -1.29
LRRC28-218ENST00000560236 EGFL7Q9UHF1 273 aa6.98□□□□□ -1.29
LRRC28-218ENST00000560236 ICMTO60725 284 aa6.97□□□□□ -1.29
LRRC28-218ENST00000560236 CTSBP07858 339 aa6.97□□□□□ -1.29
LRRC28-218ENST00000560236 USPL1Q5W0Q7 1092 aa6.97□□□□□ -1.29
LRRC28-218ENST00000560236 GATA6Q92908 595 aa6.97□□□□□ -1.29
LRRC28-218ENST00000560236 SEMA6CQ9H3T2 930 aa6.97□□□□□ -1.29
LRRC28-218ENST00000560236 C1orf115Q9H7X2 142 aa6.97□□□□□ -1.29
LRRC28-218ENST00000560236 FAM105AQ9NUU6 356 aa6.97□□□□□ -1.29
LRRC28-218ENST00000560236 AP4E1Q9UPM8 1137 aa6.97□□□□□ -1.29
LRRC28-218ENST00000560236 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.96□□□□□ -1.3
LRRC28-218ENST00000560236 H3BRB1 525 aa6.96□□□□□ -1.3
LRRC28-218ENST00000560236 B3GALT4O96024 378 aa6.96□□□□□ -1.3
LRRC28-218ENST00000560236 CYP27A1Q02318 531 aa6.96□□□□□ -1.3
LRRC28-218ENST00000560236 KIAA0319Q5VV43 1072 aa6.96□□□□□ -1.3
LRRC28-218ENST00000560236 B4GALNT3Q6L9W6 998 aa6.96□□□□□ -1.3
LRRC28-218ENST00000560236 GLYCTKQ8IVS8 523 aa6.96□□□□□ -1.3
LRRC28-218ENST00000560236 TRIM56Q9BRZ2 755 aaKnown RBP6.96□□□□□ -1.3
LRRC28-218ENST00000560236 EHD4Q9H223 541 aa6.96□□□□□ -1.3
LRRC28-218ENST00000560236 TUT1Q9H6E5 874 aaKnown RBP6.96□□□□□ -1.3
LRRC28-218ENST00000560236 LRRC4CQ9HCJ2 640 aa6.96□□□□□ -1.3
LRRC28-218ENST00000560236 GTF3C3Q9Y5Q9 886 aa6.96□□□□□ -1.3
LRRC28-218ENST00000560236 ECEL1O95672 775 aa6.95□□□□□ -1.3
LRRC28-218ENST00000560236 ASPAP45381 313 aa6.95□□□□□ -1.3
LRRC28-218ENST00000560236 NFXL1Q6ZNB6 911 aa6.95□□□□□ -1.3
LRRC28-218ENST00000560236 FLCNQ8NFG4 579 aa6.95□□□□□ -1.3
LRRC28-218ENST00000560236 ZNF576Q9H609 170 aa6.95□□□□□ -1.3
LRRC28-218ENST00000560236 ACSS3Q9H6R3 686 aa6.95□□□□□ -1.3
LRRC28-218ENST00000560236 NDUFB5O43674 189 aa6.94□□□□□ -1.3
LRRC28-218ENST00000560236 ITPKAP23677 461 aa6.94□□□□□ -1.3
LRRC28-218ENST00000560236 SERPINB4P48594 390 aa6.94□□□□□ -1.3
LRRC28-218ENST00000560236 PDE3BQ13370 1112 aa6.94□□□□□ -1.3
LRRC28-218ENST00000560236 PDE3AQ14432 1141 aa6.94□□□□□ -1.3
LRRC28-218ENST00000560236 ZNF765Q7L2R6 523 aa6.94□□□□□ -1.3
LRRC28-218ENST00000560236 AOC2O75106 756 aa6.93□□□□□ -1.3
LRRC28-218ENST00000560236 CPNE3O75131 537 aaKnown RBP6.93□□□□□ -1.3
LRRC28-218ENST00000560236 AP3B2Q13367 1082 aa6.93□□□□□ -1.3
LRRC28-218ENST00000560236 ORC1Q13415 861 aa6.93□□□□□ -1.3
LRRC28-218ENST00000560236 CBLL1Q75N03 491 aa6.93□□□□□ -1.3
LRRC28-218ENST00000560236 GSX1Q9H4S2 264 aaPredicted RBP6.93□□□□□ -1.3
LRRC28-218ENST00000560236 NPHS2Q9NP85 383 aa6.93□□□□□ -1.3
LRRC28-218ENST00000560236 ZC3H7BQ9UGR2 993 aaKnown RBP6.93□□□□□ -1.3
LRRC28-218ENST00000560236 USTQ9Y2C2 406 aa6.93□□□□□ -1.3
LRRC28-218ENST00000560236 DAGLAQ9Y4D2 1042 aa6.93□□□□□ -1.3
LRRC28-218ENST00000560236 ARHGAP4P98171 946 aa6.92□□□□□ -1.3
LRRC28-218ENST00000560236 ECM1Q16610 540 aa6.92□□□□□ -1.3
LRRC28-218ENST00000560236 AGBL5Q8NDL9 886 aa6.92□□□□□ -1.3
LRRC28-218ENST00000560236 LGR6Q9HBX8 967 aa6.92□□□□□ -1.3
LRRC28-218ENST00000560236 C1GALT1Q9NS00 363 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms