RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 ESPNB1AK53 854 aa17.06■□□□□ 0.32
RABGGTA-212ENST00000559974 POLRMTO00411 1230 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-212ENST00000559974 FGAP02671 866 aa17.06■□□□□ 0.32
RABGGTA-212ENST00000559974 MMP10P09238 476 aa17.06■□□□□ 0.32
RABGGTA-212ENST00000559974 FGFR2P21802 821 aa17.06■□□□□ 0.32
RABGGTA-212ENST00000559974 ERFEQ4G0M1 354 aa17.06■□□□□ 0.32
RABGGTA-212ENST00000559974 C3orf67Q6ZVT6 689 aa17.06■□□□□ 0.32
RABGGTA-212ENST00000559974 TTC6Q86TZ1 520 aa17.06■□□□□ 0.32
RABGGTA-212ENST00000559974 PDLIM2Q96JY6 352 aa17.06■□□□□ 0.32
RABGGTA-212ENST00000559974 ATF5Q9Y2D1 282 aaPredicted RBP17.06■□□□□ 0.32
RABGGTA-212ENST00000559974 COL4A1P02462 1669 aa17.05■□□□□ 0.32
RABGGTA-212ENST00000559974 PHKA1P46020 1223 aa17.05■□□□□ 0.32
RABGGTA-212ENST00000559974 TPRNQ4KMQ1 711 aa17.05■□□□□ 0.32
RABGGTA-212ENST00000559974 KLHL34Q8N239 644 aa17.05■□□□□ 0.32
RABGGTA-212ENST00000559974 FAM184AQ8NB25 1140 aa17.05■□□□□ 0.32
RABGGTA-212ENST00000559974 NSUN7Q8NE18 718 aaKnown RBP17.05■□□□□ 0.32
RABGGTA-212ENST00000559974 ZNF274Q96GC6 653 aaPredicted RBP17.05■□□□□ 0.32
RABGGTA-212ENST00000559974 CHD4Q14839 1912 aa17.04■□□□□ 0.32
RABGGTA-212ENST00000559974 SOCS7O14512 581 aa17.04■□□□□ 0.32
RABGGTA-212ENST00000559974 HMGN5P82970 282 aaKnown RBP17.04■□□□□ 0.32
RABGGTA-212ENST00000559974 FAM173BQ6P4H8 233 aa17.04■□□□□ 0.32
RABGGTA-212ENST00000559974 RNF214Q8ND24 703 aa17.04■□□□□ 0.32
RABGGTA-212ENST00000559974 DDX11Q96FC9 970 aa17.04■□□□□ 0.32
RABGGTA-212ENST00000559974 SCAND2PQ9GZW5 306 aaPredicted RBP17.04■□□□□ 0.32
RABGGTA-212ENST00000559974 PIH1D3Q9NQM4 214 aaKnown RBP17.04■□□□□ 0.32
RABGGTA-212ENST00000559974 TAF1P21675 1872 aa17.04■□□□□ 0.32
RABGGTA-212ENST00000559974 RTL9Q8NET4 1388 aa17.04■□□□□ 0.32
RABGGTA-212ENST00000559974 H3BQV1 296 aa17.04■□□□□ 0.32
RABGGTA-212ENST00000559974 SLC5A1P13866 664 aa17.04■□□□□ 0.32
RABGGTA-212ENST00000559974 CLCN1P35523 988 aa17.04■□□□□ 0.32
RABGGTA-212ENST00000559974 HAND2P61296 217 aa17.04■□□□□ 0.32
RABGGTA-212ENST00000559974 UBE3CQ15386 1083 aa17.04■□□□□ 0.32
RABGGTA-212ENST00000559974 SLC9C2Q5TAH2 1124 aa17.04■□□□□ 0.32
RABGGTA-212ENST00000559974 IFFO2Q5TF58 517 aa17.04■□□□□ 0.32
RABGGTA-212ENST00000559974 CHMP4CQ96CF2 233 aa17.04■□□□□ 0.32
RABGGTA-212ENST00000559974 MPHOSPH8Q99549 860 aa17.04■□□□□ 0.32
RABGGTA-212ENST00000559974 CTDNEP1O95476 244 aa17.03■□□□□ 0.32
RABGGTA-212ENST00000559974 HMGB2P26583 209 aaKnown RBP17.03■□□□□ 0.32
RABGGTA-212ENST00000559974 EVCP57679 992 aa17.03■□□□□ 0.32
RABGGTA-212ENST00000559974 RESTQ13127 1097 aa17.03■□□□□ 0.32
RABGGTA-212ENST00000559974 CCDC152Q4G0S7 254 aa17.03■□□□□ 0.32
RABGGTA-212ENST00000559974 CHST3Q7LGC8 479 aa17.03■□□□□ 0.32
RABGGTA-212ENST00000559974 NBPF5PQ86XG9 351 aaPredicted RBP17.03■□□□□ 0.32
RABGGTA-212ENST00000559974 HELBQ8NG08 1087 aaPredicted RBP17.03■□□□□ 0.32
RABGGTA-212ENST00000559974 KIF3AQ9Y496 699 aa17.03■□□□□ 0.32
RABGGTA-212ENST00000559974 NRXN2Q9P2S2 1712 aa17.03■□□□□ 0.32
RABGGTA-212ENST00000559974 ANKRD31Q8N7Z5 1873 aa17.03■□□□□ 0.32
RABGGTA-212ENST00000559974 UTRNP46939 3433 aa17.02■□□□□ 0.32
RABGGTA-212ENST00000559974 PTPDC1A2A3K4 754 aa17.02■□□□□ 0.32
RABGGTA-212ENST00000559974 IDH1O75874 414 aaKnown RBP17.02■□□□□ 0.32
RABGGTA-212ENST00000559974 SERPINB2P05120 415 aa17.02■□□□□ 0.32
RABGGTA-212ENST00000559974 PDIA3P30101 505 aaKnown RBP17.02■□□□□ 0.32
RABGGTA-212ENST00000559974 PRR5LQ6MZQ0 368 aa17.02■□□□□ 0.32
RABGGTA-212ENST00000559974 ZSCAN16Q9H4T2 348 aaPredicted RBP17.02■□□□□ 0.32
RABGGTA-212ENST00000559974 SEC31BQ9NQW1 1179 aa17.02■□□□□ 0.32
RABGGTA-212ENST00000559974 A0A1B0GUL6 1792 aa17.02■□□□□ 0.32
RABGGTA-212ENST00000559974 ZNF213O14771 459 aa17.02■□□□□ 0.31
RABGGTA-212ENST00000559974 CCT2P78371 535 aaKnown RBP17.02■□□□□ 0.31
RABGGTA-212ENST00000559974 MB21D2Q8IYB1 491 aaPredicted RBP17.02■□□□□ 0.31
RABGGTA-212ENST00000559974 NLGN1Q8N2Q7 840 aa17.02■□□□□ 0.31
RABGGTA-212ENST00000559974 SALL1Q9NSC2 1324 aa17.01■□□□□ 0.31
RABGGTA-212ENST00000559974 PDE6AP16499 860 aa17.01■□□□□ 0.31
RABGGTA-212ENST00000559974 MCM5P33992 734 aa17.01■□□□□ 0.31
RABGGTA-212ENST00000559974 NAA16Q6N069 864 aaPredicted RBP17.01■□□□□ 0.31
RABGGTA-212ENST00000559974 NCOA7Q8NI08 942 aa17.01■□□□□ 0.31
RABGGTA-212ENST00000559974 SPATA32Q96LK8 384 aa17.01■□□□□ 0.31
RABGGTA-212ENST00000559974 NAP1L2Q9ULW6 460 aaPredicted RBP17.01■□□□□ 0.31
RABGGTA-212ENST00000559974 ZNF532Q9HCE3 1301 aa17.01■□□□□ 0.31
RABGGTA-212ENST00000559974 RGL2O15211 777 aa17■□□□□ 0.31
RABGGTA-212ENST00000559974 IGHMBP2P38935 993 aaKnown RBP17■□□□□ 0.31
RABGGTA-212ENST00000559974 HS1BP3Q53T59 392 aa17■□□□□ 0.31
RABGGTA-212ENST00000559974 SPATA5Q8NB90 893 aa17■□□□□ 0.31
RABGGTA-212ENST00000559974 LEO1Q8WVC0 666 aaPredicted RBP17■□□□□ 0.31
RABGGTA-212ENST00000559974 WDR19Q8NEZ3 1342 aa17■□□□□ 0.31
RABGGTA-212ENST00000559974 TCRBV5S4A2TA0A5A2 114 aa17■□□□□ 0.31
RABGGTA-212ENST00000559974 PRC1O43663 620 aa17■□□□□ 0.31
RABGGTA-212ENST00000559974 RALYLQ86SE5 291 aaKnown RBP17■□□□□ 0.31
RABGGTA-212ENST00000559974 SLC51AQ86UW1 340 aa17■□□□□ 0.31
RABGGTA-212ENST00000559974 NCOA5Q9HCD5 579 aaKnown RBP17■□□□□ 0.31
RABGGTA-212ENST00000559974 TFIP11Q9UBB9 837 aaKnown RBP17■□□□□ 0.31
RABGGTA-212ENST00000559974 WWC3Q9ULE0 1092 aa17■□□□□ 0.31
RABGGTA-212ENST00000559974 UVSSAQ2YD98 709 aa16.99■□□□□ 0.31
RABGGTA-212ENST00000559974 CNBD1Q8NA66 436 aa16.99■□□□□ 0.31
RABGGTA-212ENST00000559974 RASGRF1Q13972 1273 aa16.98■□□□□ 0.31
RABGGTA-212ENST00000559974 FUCA2Q9BTY2 467 aa16.98■□□□□ 0.31
RABGGTA-212ENST00000559974 GOLGA6L4A6NEF3 574 aa16.98■□□□□ 0.31
RABGGTA-212ENST00000559974 ANTXR2P58335 489 aa16.98■□□□□ 0.31
RABGGTA-212ENST00000559974 GIMAP6Q6P9H5 292 aa16.98■□□□□ 0.31
RABGGTA-212ENST00000559974 ZSCAN30Q86W11 494 aa16.98■□□□□ 0.31
RABGGTA-212ENST00000559974 GPHNQ9NQX3 736 aaPredicted RBP16.98■□□□□ 0.31
RABGGTA-212ENST00000559974 CFAP45Q9UL16 551 aa16.98■□□□□ 0.31
RABGGTA-212ENST00000559974 COL11A2P13942 1736 aaPredicted RBP16.98■□□□□ 0.31
RABGGTA-212ENST00000559974 GTF2E1P29083 439 aaPredicted RBP16.97■□□□□ 0.31
RABGGTA-212ENST00000559974 MAP3K12Q12852 859 aa16.97■□□□□ 0.31
RABGGTA-212ENST00000559974 AIDAQ96BJ3 306 aa16.97■□□□□ 0.31
RABGGTA-212ENST00000559974 NBPF3Q9H094 633 aa16.97■□□□□ 0.31
RABGGTA-212ENST00000559974 PARP3Q9Y6F1 533 aa16.97■□□□□ 0.31
RABGGTA-212ENST00000559974 SNAP23O00161 211 aa16.97■□□□□ 0.31
RABGGTA-212ENST00000559974 APPP05067 770 aa16.97■□□□□ 0.31
RABGGTA-212ENST00000559974 LIG1P18858 919 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms