RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 ZNF316A6NFI3 1004 aaPredicted RBP16.52■□□□□ 0.24
TPM1-220ENST00000559556 USP2O75604 605 aaPredicted RBP16.52■□□□□ 0.24
TPM1-220ENST00000559556 GJA5P36382 358 aa16.52■□□□□ 0.24
TPM1-220ENST00000559556 ANKRD13AQ8IZ07 590 aa16.52■□□□□ 0.24
TPM1-220ENST00000559556 FAM9BQ8IZU0 186 aa16.52■□□□□ 0.24
TPM1-220ENST00000559556 BICC1Q9H694 974 aaKnown RBP16.52■□□□□ 0.24
TPM1-220ENST00000559556 ZNF70Q9UC06 446 aaPredicted RBP16.52■□□□□ 0.24
TPM1-220ENST00000559556 DOCK1Q14185 1865 aa16.51■□□□□ 0.23
TPM1-220ENST00000559556 ZEB1P37275 1124 aaPredicted RBP16.51■□□□□ 0.23
TPM1-220ENST00000559556 DZIP1LQ8IYY4 767 aaKnown RBP16.51■□□□□ 0.23
TPM1-220ENST00000559556 TEPSINQ96N21 525 aa16.51■□□□□ 0.23
TPM1-220ENST00000559556 PTPRCP08575 1304 aa16.5■□□□□ 0.23
TPM1-220ENST00000559556 FBXO33Q7Z6M2 555 aa16.5■□□□□ 0.23
TPM1-220ENST00000559556 ANKRD44Q8N8A2 993 aa16.5■□□□□ 0.23
TPM1-220ENST00000559556 VGLL2Q8N8G2 317 aa16.5■□□□□ 0.23
TPM1-220ENST00000559556 TDRD3Q9H7E2 651 aaKnown RBP16.5■□□□□ 0.23
TPM1-220ENST00000559556 MYO5AQ9Y4I1 1855 aaKnown RBP16.5■□□□□ 0.23
TPM1-220ENST00000559556 TESPA1A2RU30 521 aaPredicted RBP16.49■□□□□ 0.23
TPM1-220ENST00000559556 CRKP46108 304 aa16.49■□□□□ 0.23
TPM1-220ENST00000559556 PRPF38BQ5VTL8 546 aaKnown RBP16.49■□□□□ 0.23
TPM1-220ENST00000559556 OTOP1Q7RTM1 612 aa16.49■□□□□ 0.23
TPM1-220ENST00000559556 CDAN1Q8IWY9 1227 aa16.49■□□□□ 0.23
TPM1-220ENST00000559556 MRPL50Q8N5N7 158 aaKnown RBP16.49■□□□□ 0.23
TPM1-220ENST00000559556 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.49■□□□□ 0.23
TPM1-220ENST00000559556 KIF16BQ96L93 1317 aa16.48■□□□□ 0.23
TPM1-220ENST00000559556 HDLBPQ00341 1268 aaKnown RBP16.48■□□□□ 0.23
TPM1-220ENST00000559556 CRHR2Q13324 411 aa16.48■□□□□ 0.23
TPM1-220ENST00000559556 GRIK5Q16478 980 aa16.48■□□□□ 0.23
TPM1-220ENST00000559556 LRRC24Q50LG9 513 aa16.48■□□□□ 0.23
TPM1-220ENST00000559556 OTUD7BQ6GQQ9 843 aa16.48■□□□□ 0.23
TPM1-220ENST00000559556 TBC1D22AQ8WUA7 517 aa16.48■□□□□ 0.23
TPM1-220ENST00000559556 IQSEC3Q9UPP2 1182 aaPredicted RBP16.48■□□□□ 0.23
TPM1-220ENST00000559556 FOCADQ5VW36 1801 aa16.47■□□□□ 0.23
TPM1-220ENST00000559556 TRIOBPQ9H2D6 2365 aa16.47■□□□□ 0.23
TPM1-220ENST00000559556 PDE8BO95263 885 aa16.47■□□□□ 0.23
TPM1-220ENST00000559556 TNNI2P48788 182 aa16.47■□□□□ 0.23
TPM1-220ENST00000559556 METTL24Q5JXM2 366 aa16.47■□□□□ 0.23
TPM1-220ENST00000559556 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.47■□□□□ 0.23
TPM1-220ENST00000559556 VPS37DQ86XT2 251 aa16.47■□□□□ 0.23
TPM1-220ENST00000559556 OPTNQ96CV9 577 aa16.47■□□□□ 0.23
TPM1-220ENST00000559556 ERO1AQ96HE7 468 aa16.47■□□□□ 0.23
TPM1-220ENST00000559556 PTPN18Q99952 460 aa16.47■□□□□ 0.23
TPM1-220ENST00000559556 TMEM39BQ9GZU3 492 aa16.47■□□□□ 0.23
TPM1-220ENST00000559556 ELP3Q9H9T3 547 aa16.47■□□□□ 0.23
TPM1-220ENST00000559556 TRIM17Q9Y577 477 aa16.47■□□□□ 0.23
TPM1-220ENST00000559556 RPAP1Q9BWH6 1393 aaPredicted RBP16.47■□□□□ 0.23
TPM1-220ENST00000559556 TCP10L2B9ZVM9 353 aa16.46■□□□□ 0.23
TPM1-220ENST00000559556 CAVIN4Q5BKX8 364 aa16.46■□□□□ 0.23
TPM1-220ENST00000559556 TEKT1Q969V4 418 aa16.46■□□□□ 0.23
TPM1-220ENST00000559556 MS4A4AQ96JQ5 239 aa16.46■□□□□ 0.23
TPM1-220ENST00000559556 CHAF1AQ13111 956 aaPredicted RBP16.45■□□□□ 0.22
TPM1-220ENST00000559556 VGLL4Q14135 290 aa16.45■□□□□ 0.22
TPM1-220ENST00000559556 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.45■□□□□ 0.22
TPM1-220ENST00000559556 CD99L2Q8TCZ2 262 aa16.45■□□□□ 0.22
TPM1-220ENST00000559556 USP44Q9H0E7 712 aa16.45■□□□□ 0.22
TPM1-220ENST00000559556 MAST3O60307 1309 aa16.45■□□□□ 0.22
TPM1-220ENST00000559556 E9PSI1 815 aa16.44■□□□□ 0.22
TPM1-220ENST00000559556 FRAT2O75474 233 aaPredicted RBP16.44■□□□□ 0.22
TPM1-220ENST00000559556 FGFR2P21802 821 aa16.44■□□□□ 0.22
TPM1-220ENST00000559556 PUM3Q15397 648 aaKnown RBP16.44■□□□□ 0.22
TPM1-220ENST00000559556 FKBP1CQ5VVH2 108 aa16.44■□□□□ 0.22
TPM1-220ENST00000559556 KLHDC4Q8TBB5 520 aa16.44■□□□□ 0.22
TPM1-220ENST00000559556 CNKSR2Q8WXI2 1034 aa16.44■□□□□ 0.22
TPM1-220ENST00000559556 SSH1Q8WYL5 1049 aa16.44■□□□□ 0.22
TPM1-220ENST00000559556 ZDHHC15Q96MV8 337 aa16.44■□□□□ 0.22
TPM1-220ENST00000559556 MRIQ9BWK5 157 aa16.44■□□□□ 0.22
TPM1-220ENST00000559556 PTPN22Q9Y2R2 807 aa16.44■□□□□ 0.22
TPM1-220ENST00000559556 SUGT1Q9Y2Z0 365 aa16.44■□□□□ 0.22
TPM1-220ENST00000559556 BCAMP50895 628 aa16.43■□□□□ 0.22
TPM1-220ENST00000559556 SP3Q02447 781 aa16.43■□□□□ 0.22
TPM1-220ENST00000559556 INTS3Q68E01 1043 aaKnown RBP16.43■□□□□ 0.22
TPM1-220ENST00000559556 FAM83AQ86UY5 434 aa16.43■□□□□ 0.22
TPM1-220ENST00000559556 BRI3BPQ8WY22 251 aa16.43■□□□□ 0.22
TPM1-220ENST00000559556 CSADQ9Y600 493 aa16.43■□□□□ 0.22
TPM1-220ENST00000559556 RANBP2P49792 3224 aaKnown RBP16.43■□□□□ 0.22
TPM1-220ENST00000559556 GTF2A2P52657 109 aa16.42■□□□□ 0.22
TPM1-220ENST00000559556 CACNB3P54284 484 aa16.42■□□□□ 0.22
TPM1-220ENST00000559556 MAP3K9P80192 1104 aa16.42■□□□□ 0.22
TPM1-220ENST00000559556 CAP1Q01518 475 aa16.42■□□□□ 0.22
TPM1-220ENST00000559556 EFCC1Q9HA90 598 aa16.42■□□□□ 0.22
TPM1-220ENST00000559556 MAST2Q6P0Q8 1798 aa16.41■□□□□ 0.22
TPM1-220ENST00000559556 CCL15-CCL14A0A0B4J2E2 113 aa16.41■□□□□ 0.22
TPM1-220ENST00000559556 SPDYE5A6NIY4 337 aa16.41■□□□□ 0.22
TPM1-220ENST00000559556 IFIT1P09914 478 aaKnown RBP16.41■□□□□ 0.22
TPM1-220ENST00000559556 RFX5P48382 616 aaPredicted RBP16.41■□□□□ 0.22
TPM1-220ENST00000559556 CCL15Q16663 113 aa16.41■□□□□ 0.22
TPM1-220ENST00000559556 ALDH1L2Q3SY69 923 aa16.41■□□□□ 0.22
TPM1-220ENST00000559556 APOBEC3HQ6NTF7 200 aaKnown RBP16.41■□□□□ 0.22
TPM1-220ENST00000559556 HHIPL2Q6UWX4 724 aa16.41■□□□□ 0.22
TPM1-220ENST00000559556 ARMC5Q96C12 935 aa16.41■□□□□ 0.22
TPM1-220ENST00000559556 OTUD5Q96G74 571 aa16.41■□□□□ 0.22
TPM1-220ENST00000559556 TMOD2Q9NZR1 351 aa16.41■□□□□ 0.22
TPM1-220ENST00000559556 SNCAIPQ9Y6H5 919 aa16.41■□□□□ 0.22
TPM1-220ENST00000559556 LOC285556D6RIA3 1793 aa16.41■□□□□ 0.22
TPM1-220ENST00000559556 POTEFA5A3E0 1075 aa16.4■□□□□ 0.22
TPM1-220ENST00000559556 EYA2O00167 538 aa16.4■□□□□ 0.22
TPM1-220ENST00000559556 SLFN5Q08AF3 891 aa16.4■□□□□ 0.22
TPM1-220ENST00000559556 TAF1CQ15572 869 aaPredicted RBP16.4■□□□□ 0.22
TPM1-220ENST00000559556 HOOK2Q96ED9 719 aa16.4■□□□□ 0.22
TPM1-220ENST00000559556 PCDH10Q9P2E7 1040 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms