RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 COL4A5P29400 1685 aa17.13■□□□□ 0.33
RABGGTA-209ENST00000559551 MECOMQ03112 1051 aa17.12■□□□□ 0.33
RABGGTA-209ENST00000559551 DOK7Q18PE1 504 aa17.12■□□□□ 0.33
RABGGTA-209ENST00000559551 TTLL5Q6EMB2 1281 aa17.12■□□□□ 0.33
RABGGTA-209ENST00000559551 LCORLQ8N3X6 602 aa17.12■□□□□ 0.33
RABGGTA-209ENST00000559551 SNX21Q969T3 373 aa17.12■□□□□ 0.33
RABGGTA-209ENST00000559551 ADAMTSL1Q8N6G6 1762 aa17.12■□□□□ 0.33
RABGGTA-209ENST00000559551 CYP21A2P08686 494 aa17.12■□□□□ 0.33
RABGGTA-209ENST00000559551 CYP7A1P22680 504 aa17.12■□□□□ 0.33
RABGGTA-209ENST00000559551 TGFB2P61812 414 aa17.12■□□□□ 0.33
RABGGTA-209ENST00000559551 MIGA1Q8NAN2 632 aa17.12■□□□□ 0.33
RABGGTA-209ENST00000559551 ARMT1Q9H993 441 aa17.12■□□□□ 0.33
RABGGTA-209ENST00000559551 MBD4O95243 580 aa17.11■□□□□ 0.33
RABGGTA-209ENST00000559551 CPA1P15085 419 aa17.11■□□□□ 0.33
RABGGTA-209ENST00000559551 UPF3BQ9BZI7 483 aaKnown RBP17.11■□□□□ 0.33
RABGGTA-209ENST00000559551 ZC3H12CQ9C0D7 883 aaKnown RBP17.11■□□□□ 0.33
RABGGTA-209ENST00000559551 COA1Q9GZY4 146 aa17.11■□□□□ 0.33
RABGGTA-209ENST00000559551 KCNQ5Q9NR82 932 aa17.11■□□□□ 0.33
RABGGTA-209ENST00000559551 FAM205AQ6ZU69 1335 aa17.11■□□□□ 0.33
RABGGTA-209ENST00000559551 RPAP1Q9BWH6 1393 aaPredicted RBP17.11■□□□□ 0.33
RABGGTA-209ENST00000559551 STOX1Q6ZVD7 989 aa17.11■□□□□ 0.33
RABGGTA-209ENST00000559551 WDR66Q8TBY9 1149 aa17.11■□□□□ 0.33
RABGGTA-209ENST00000559551 RIOK1Q9BRS2 568 aaKnown RBP17.11■□□□□ 0.33
RABGGTA-209ENST00000559551 U3KPZ7 1027 aaPredicted RBP17.11■□□□□ 0.33
RABGGTA-209ENST00000559551 PRKAB2O43741 272 aa17.1■□□□□ 0.33
RABGGTA-209ENST00000559551 EPB41L4AQ9HCS5 686 aaPredicted RBP17.1■□□□□ 0.33
RABGGTA-209ENST00000559551 FGAP02671 866 aa17.09■□□□□ 0.33
RABGGTA-209ENST00000559551 DYNLL1P63167 89 aaKnown RBP17.09■□□□□ 0.33
RABGGTA-209ENST00000559551 TSGA10IPQ3SY00 556 aa17.09■□□□□ 0.33
RABGGTA-209ENST00000559551 NAA16Q6N069 864 aaPredicted RBP17.09■□□□□ 0.33
RABGGTA-209ENST00000559551 CERS5Q8N5B7 392 aa17.09■□□□□ 0.33
RABGGTA-209ENST00000559551 DBNDD1Q9H9R9 158 aa17.09■□□□□ 0.33
RABGGTA-209ENST00000559551 ARFGEF1Q9Y6D6 1849 aa17.09■□□□□ 0.33
RABGGTA-209ENST00000559551 GTF2IP78347 998 aa17.09■□□□□ 0.33
RABGGTA-209ENST00000559551 CC2D2BQ6DHV5 1058 aa17.09■□□□□ 0.33
RABGGTA-209ENST00000559551 AIDAQ96BJ3 306 aa17.09■□□□□ 0.33
RABGGTA-209ENST00000559551 MXD3Q9BW11 206 aa17.09■□□□□ 0.33
RABGGTA-209ENST00000559551 TMX4Q9H1E5 349 aaPredicted RBP17.09■□□□□ 0.33
RABGGTA-209ENST00000559551 GSG1L2A8MUP6 293 aa17.08■□□□□ 0.33
RABGGTA-209ENST00000559551 NEK4P51957 841 aa17.08■□□□□ 0.33
RABGGTA-209ENST00000559551 AOC3Q16853 763 aa17.08■□□□□ 0.33
RABGGTA-209ENST00000559551 TTC14Q96N46 770 aa17.08■□□□□ 0.33
RABGGTA-209ENST00000559551 EYA3Q99504 573 aa17.08■□□□□ 0.33
RABGGTA-209ENST00000559551 NBPF3Q9H094 633 aa17.08■□□□□ 0.33
RABGGTA-209ENST00000559551 PIM2Q9P1W9 311 aa17.08■□□□□ 0.33
RABGGTA-209ENST00000559551 PPP1R1BQ9UD71 204 aaPredicted RBP17.08■□□□□ 0.33
RABGGTA-209ENST00000559551 CD2APQ9Y5K6 639 aa17.08■□□□□ 0.33
RABGGTA-209ENST00000559551 DIXDC1Q155Q3 683 aa17.08■□□□□ 0.32
RABGGTA-209ENST00000559551 NLGN2Q8NFZ4 835 aa17.08■□□□□ 0.32
RABGGTA-209ENST00000559551 LDHBP07195 334 aaKnown RBP17.07■□□□□ 0.32
RABGGTA-209ENST00000559551 KIAA2012Q0VF49 1180 aa17.07■□□□□ 0.32
RABGGTA-209ENST00000559551 CCDC93Q567U6 631 aa17.07■□□□□ 0.32
RABGGTA-209ENST00000559551 MFSD14BQ5SR56 506 aa17.07■□□□□ 0.32
RABGGTA-209ENST00000559551 JAKMIP1Q96N16 626 aaKnown RBP17.07■□□□□ 0.32
RABGGTA-209ENST00000559551 ZSWIM6Q9HCJ5 1215 aa17.07■□□□□ 0.32
RABGGTA-209ENST00000559551 CASTP20810 708 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-209ENST00000559551 KLHL34Q8N239 644 aa17.06■□□□□ 0.32
RABGGTA-209ENST00000559551 TM6SF1Q9BZW5 370 aa17.06■□□□□ 0.32
RABGGTA-209ENST00000559551 FOCADQ5VW36 1801 aa17.06■□□□□ 0.32
RABGGTA-209ENST00000559551 MAGEB6P1A0A0J9YX57 407 aa17.06■□□□□ 0.32
RABGGTA-209ENST00000559551 ECE2O60344 883 aa17.06■□□□□ 0.32
RABGGTA-209ENST00000559551 BECN1Q14457 450 aa17.06■□□□□ 0.32
RABGGTA-209ENST00000559551 SPTY2D1Q68D10 685 aaPredicted RBP17.06■□□□□ 0.32
RABGGTA-209ENST00000559551 ZGPATQ8N5A5 531 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-209ENST00000559551 NKX2-3Q8TAU0 364 aa17.06■□□□□ 0.32
RABGGTA-209ENST00000559551 YDJCA8MPS7 323 aa17.05■□□□□ 0.32
RABGGTA-209ENST00000559551 PATL2C9JE40 543 aaKnown RBP17.05■□□□□ 0.32
RABGGTA-209ENST00000559551 ZKSCAN1P17029 563 aaPredicted RBP17.05■□□□□ 0.32
RABGGTA-209ENST00000559551 HAND2P61296 217 aa17.05■□□□□ 0.32
RABGGTA-209ENST00000559551 IFNL3Q8IZI9 196 aa17.05■□□□□ 0.32
RABGGTA-209ENST00000559551 SDR42E1Q8WUS8 393 aa17.05■□□□□ 0.32
RABGGTA-209ENST00000559551 PSMD1Q99460 953 aa17.05■□□□□ 0.32
RABGGTA-209ENST00000559551 TACC3Q9Y6A5 838 aa17.05■□□□□ 0.32
RABGGTA-209ENST00000559551 TIAM2Q8IVF5 1701 aa17.05■□□□□ 0.32
RABGGTA-209ENST00000559551 LAMB1P07942 1786 aa17.05■□□□□ 0.32
RABGGTA-209ENST00000559551 ALX1Q15699 326 aa17.05■□□□□ 0.32
RABGGTA-209ENST00000559551 DALRD3Q5D0E6 543 aaKnown RBP17.05■□□□□ 0.32
RABGGTA-209ENST00000559551 RNF20Q5VTR2 975 aa17.05■□□□□ 0.32
RABGGTA-209ENST00000559551 PODNQ7Z5L7 613 aa17.05■□□□□ 0.32
RABGGTA-209ENST00000559551 DZIP1Q86YF9 867 aaKnown RBP17.05■□□□□ 0.32
RABGGTA-209ENST00000559551 HSCBQ8IWL3 235 aa17.05■□□□□ 0.32
RABGGTA-209ENST00000559551 AATFQ9NY61 560 aaKnown RBP eCLIP17.05■□□□□ 0.32
RABGGTA-209ENST00000559551 SLC4A4Q9Y6R1 1079 aa17.05■□□□□ 0.32
RABGGTA-209ENST00000559551 SMIM22K7EJ46 135 aa17.04■□□□□ 0.32
RABGGTA-209ENST00000559551 K7ELQ4 463 aaPredicted RBP17.04■□□□□ 0.32
RABGGTA-209ENST00000559551 RTKN2Q8IZC4 609 aa17.04■□□□□ 0.32
RABGGTA-209ENST00000559551 TCEANC2Q96MN5 208 aa17.04■□□□□ 0.32
RABGGTA-209ENST00000559551 ZNF277Q9NRM2 450 aaPredicted RBP17.04■□□□□ 0.32
RABGGTA-209ENST00000559551 ECM29Q5VYK3 1845 aa17.04■□□□□ 0.32
RABGGTA-209ENST00000559551 E7EWF7 191 aa17.03■□□□□ 0.32
RABGGTA-209ENST00000559551 TBC1D22AQ8WUA7 517 aa17.03■□□□□ 0.32
RABGGTA-209ENST00000559551 UTRNP46939 3433 aa17.03■□□□□ 0.32
RABGGTA-209ENST00000559551 NAV1Q8NEY1 1877 aa17.03■□□□□ 0.32
RABGGTA-209ENST00000559551 ZMYM6O95789 1325 aa17.03■□□□□ 0.32
RABGGTA-209ENST00000559551 PPIP5K2O43314 1243 aa17.03■□□□□ 0.32
RABGGTA-209ENST00000559551 DDX60LQ5H9U9 1706 aaKnown RBP17.03■□□□□ 0.32
RABGGTA-209ENST00000559551 RUFY3Q7L099 469 aa17.03■□□□□ 0.32
RABGGTA-209ENST00000559551 TBC1D10CQ8IV04 446 aa17.03■□□□□ 0.32
RABGGTA-209ENST00000559551 SPRYD3Q8NCJ5 442 aa17.03■□□□□ 0.32
RABGGTA-209ENST00000559551 SUPT20HQ8NEM7 779 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms