RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 SREBF2Q12772 1141 aa25.67■■□□□ 1.7
TSPAN3-206ENST00000559373 WNK4Q96J92 1243 aa25.67■■□□□ 1.7
TSPAN3-206ENST00000559373 MYH2Q9UKX2 1941 aa25.67■■□□□ 1.7
TSPAN3-206ENST00000559373 SOX10P56693 466 aa25.66■■□□□ 1.7
TSPAN3-206ENST00000559373 MLLT1Q03111 559 aaPredicted RBP25.66■■□□□ 1.7
TSPAN3-206ENST00000559373 MAP3K11Q16584 847 aa25.66■■□□□ 1.7
TSPAN3-206ENST00000559373 TMEM39BQ9GZU3 492 aa25.66■■□□□ 1.7
TSPAN3-206ENST00000559373 GPR25O00155 361 aa25.65■■□□□ 1.7
TSPAN3-206ENST00000559373 EYA2O00167 538 aa25.65■■□□□ 1.7
TSPAN3-206ENST00000559373 UBTFL1P0CB47 393 aaPredicted RBP25.65■■□□□ 1.7
TSPAN3-206ENST00000559373 FGFR2P21802 821 aa25.65■■□□□ 1.7
TSPAN3-206ENST00000559373 GJA5P36382 358 aa25.65■■□□□ 1.7
TSPAN3-206ENST00000559373 PUM3Q15397 648 aaKnown RBP25.65■■□□□ 1.7
TSPAN3-206ENST00000559373 ATG9AQ7Z3C6 839 aa25.65■■□□□ 1.7
TSPAN3-206ENST00000559373 IREB2P48200 963 aaKnown RBP25.64■■□□□ 1.7
TSPAN3-206ENST00000559373 TEPSINQ96N21 525 aa25.64■■□□□ 1.7
TSPAN3-206ENST00000559373 LRRFIP2Q9Y608 721 aaKnown RBP25.64■■□□□ 1.7
TSPAN3-206ENST00000559373 IFIT1P09914 478 aaKnown RBP25.63■■□□□ 1.69
TSPAN3-206ENST00000559373 RGS19P49795 217 aa25.63■■□□□ 1.69
TSPAN3-206ENST00000559373 ELP3Q9H9T3 547 aa25.63■■□□□ 1.69
TSPAN3-206ENST00000559373 PA2G4Q9UQ80 394 aaKnown RBP25.63■■□□□ 1.69
TSPAN3-206ENST00000559373 TNFAIP1Q13829 316 aa25.62■■□□□ 1.69
TSPAN3-206ENST00000559373 IFNL1Q8IU54 200 aa25.62■■□□□ 1.69
TSPAN3-206ENST00000559373 CNKSR2Q8WXI2 1034 aa25.62■■□□□ 1.69
TSPAN3-206ENST00000559373 IGF2BP3O00425 579 aaKnown RBP eCLIP25.61■■□□□ 1.69
TSPAN3-206ENST00000559373 SLC5A1P13866 664 aa25.61■■□□□ 1.69
TSPAN3-206ENST00000559373 TBC1D22AQ8WUA7 517 aa25.61■■□□□ 1.69
TSPAN3-206ENST00000559373 TEKT1Q969V4 418 aa25.61■■□□□ 1.69
TSPAN3-206ENST00000559373 MEIS3Q99687 375 aa25.61■■□□□ 1.69
TSPAN3-206ENST00000559373 MANSC4A6NHS7 340 aaPredicted RBP25.6■■□□□ 1.69
TSPAN3-206ENST00000559373 CCER2I3L3R5 266 aa25.6■■□□□ 1.69
TSPAN3-206ENST00000559373 RARSP54136 660 aaKnown RBP25.6■■□□□ 1.69
TSPAN3-206ENST00000559373 ANKRD13AQ8IZ07 590 aa25.6■■□□□ 1.69
TSPAN3-206ENST00000559373 TNNQ9UQP3 1299 aa25.6■■□□□ 1.69
TSPAN3-206ENST00000559373 ZBTB48P10074 688 aaPredicted RBP25.59■■□□□ 1.69
TSPAN3-206ENST00000559373 LPIN2Q92539 896 aa25.59■■□□□ 1.69
TSPAN3-206ENST00000559373 API5Q9BZZ5 524 aaKnown RBP25.59■■□□□ 1.69
TSPAN3-206ENST00000559373 HPS5Q9UPZ3 1129 aa25.59■■□□□ 1.69
TSPAN3-206ENST00000559373 FKTNO75072 461 aa25.58■■□□□ 1.69
TSPAN3-206ENST00000559373 TNNI2P48788 182 aa25.58■■□□□ 1.69
TSPAN3-206ENST00000559373 OPTNQ96CV9 577 aa25.58■■□□□ 1.69
TSPAN3-206ENST00000559373 ATP2B3Q16720 1220 aa25.57■■□□□ 1.68
TSPAN3-206ENST00000559373 APOBEC3HQ6NTF7 200 aaKnown RBP25.57■■□□□ 1.68
TSPAN3-206ENST00000559373 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.57■■□□□ 1.68
TSPAN3-206ENST00000559373 PDE4DIPQ5VU43 2346 aa25.56■■□□□ 1.68
TSPAN3-206ENST00000559373 CT47B1P0C2W7 299 aaPredicted RBP25.56■■□□□ 1.68
TSPAN3-206ENST00000559373 HDLBPQ00341 1268 aaKnown RBP25.56■■□□□ 1.68
TSPAN3-206ENST00000559373 ZDHHC15Q96MV8 337 aa25.56■■□□□ 1.68
TSPAN3-206ENST00000559373 PTPN18Q99952 460 aa25.56■■□□□ 1.68
TSPAN3-206ENST00000559373 CEP126Q9P2H0 1117 aa25.56■■□□□ 1.68
TSPAN3-206ENST00000559373 CENPFP49454 3210 aa25.56■■□□□ 1.68
TSPAN3-206ENST00000559373 VGLL4Q14135 290 aa25.55■■□□□ 1.68
TSPAN3-206ENST00000559373 ZSWIM8A7E2V4 1837 aa25.55■■□□□ 1.68
TSPAN3-206ENST00000559373 ALDH1A1P00352 501 aa25.54■■□□□ 1.68
TSPAN3-206ENST00000559373 ADORA1P30542 326 aa25.54■■□□□ 1.68
TSPAN3-206ENST00000559373 PHKA1P46020 1223 aa25.54■■□□□ 1.68
TSPAN3-206ENST00000559373 INHBEP58166 350 aa25.54■■□□□ 1.68
TSPAN3-206ENST00000559373 DIXDC1Q155Q3 683 aa25.54■■□□□ 1.68
TSPAN3-206ENST00000559373 KIF16BQ96L93 1317 aa25.54■■□□□ 1.68
TSPAN3-206ENST00000559373 BCAR3O75815 825 aa25.53■■□□□ 1.68
TSPAN3-206ENST00000559373 PRDX5P30044 214 aa25.53■■□□□ 1.68
TSPAN3-206ENST00000559373 CRHR2Q13324 411 aa25.53■■□□□ 1.68
TSPAN3-206ENST00000559373 WDR66Q8TBY9 1149 aa25.53■■□□□ 1.68
TSPAN3-206ENST00000559373 CFHR5Q9BXR6 569 aa25.53■■□□□ 1.68
TSPAN3-206ENST00000559373 TMOD2Q9NZR1 351 aa25.53■■□□□ 1.68
TSPAN3-206ENST00000559373 UNCXA6NJT0 531 aa25.52■■□□□ 1.68
TSPAN3-206ENST00000559373 CIAO1O76071 339 aa25.52■■□□□ 1.68
TSPAN3-206ENST00000559373 MAP3K9P80192 1104 aa25.52■■□□□ 1.68
TSPAN3-206ENST00000559373 TCP10Q12799 353 aa25.52■■□□□ 1.68
TSPAN3-206ENST00000559373 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.52■■□□□ 1.68
TSPAN3-206ENST00000559373 FRAT1Q92837 279 aaPredicted RBP25.52■■□□□ 1.68
TSPAN3-206ENST00000559373 OTUD5Q96G74 571 aa25.52■■□□□ 1.68
TSPAN3-206ENST00000559373 MAST3O60307 1309 aa25.52■■□□□ 1.68
TSPAN3-206ENST00000559373 DOCK2Q92608 1830 aa25.51■■□□□ 1.67
TSPAN3-206ENST00000559373 HTTP42858 3142 aa25.51■■□□□ 1.67
TSPAN3-206ENST00000559373 TIMM10P62072 90 aa25.51■■□□□ 1.67
TSPAN3-206ENST00000559373 PKN2Q16513 984 aaKnown RBP25.51■■□□□ 1.67
TSPAN3-206ENST00000559373 NOM1Q5C9Z4 860 aaKnown RBP25.51■■□□□ 1.67
TSPAN3-206ENST00000559373 MIGA2Q7L4E1 593 aa25.51■■□□□ 1.67
TSPAN3-206ENST00000559373 ZKSCAN4Q969J2 545 aaPredicted RBP25.51■■□□□ 1.67
TSPAN3-206ENST00000559373 CLUAP1Q96AJ1 413 aa25.51■■□□□ 1.67
TSPAN3-206ENST00000559373 MS4A4AQ96JQ5 239 aa25.51■■□□□ 1.67
TSPAN3-206ENST00000559373 IL15P40933 162 aaPredicted RBP25.5■■□□□ 1.67
TSPAN3-206ENST00000559373 HHIPL2Q6UWX4 724 aa25.5■■□□□ 1.67
TSPAN3-206ENST00000559373 MRIQ9BWK5 157 aa25.5■■□□□ 1.67
TSPAN3-206ENST00000559373 SUGT1Q9Y2Z0 365 aa25.5■■□□□ 1.67
TSPAN3-206ENST00000559373 DAGLAQ9Y4D2 1042 aa25.5■■□□□ 1.67
TSPAN3-206ENST00000559373 MYO5AQ9Y4I1 1855 aaKnown RBP25.5■■□□□ 1.67
TSPAN3-206ENST00000559373 TRIM17Q9Y577 477 aa25.5■■□□□ 1.67
TSPAN3-206ENST00000559373 CSADQ9Y600 493 aa25.5■■□□□ 1.67
TSPAN3-206ENST00000559373 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.5■■□□□ 1.67
TSPAN3-206ENST00000559373 INTS3Q68E01 1043 aaKnown RBP25.49■■□□□ 1.67
TSPAN3-206ENST00000559373 FBXO46Q6PJ61 603 aaPredicted RBP25.49■■□□□ 1.67
TSPAN3-206ENST00000559373 CD99L2Q8TCZ2 262 aa25.49■■□□□ 1.67
TSPAN3-206ENST00000559373 WRNIP1Q96S55 665 aa25.49■■□□□ 1.67
TSPAN3-206ENST00000559373 SRGAP3O43295 1099 aa25.48■■□□□ 1.67
TSPAN3-206ENST00000559373 CAP1Q01518 475 aa25.48■■□□□ 1.67
TSPAN3-206ENST00000559373 OTUD7BQ6GQQ9 843 aa25.48■■□□□ 1.67
TSPAN3-206ENST00000559373 CDC42EP5Q6NZY7 148 aa25.48■■□□□ 1.67
TSPAN3-206ENST00000559373 BRI3BPQ8WY22 251 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms