RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 INTS3Q68E01 1043 aaKnown RBP14.06□□□□□ -0.16
RABGGTA-204ENST00000558376 CDAN1Q8IWY9 1227 aa14.06□□□□□ -0.16
RABGGTA-204ENST00000558376 ANKRD13AQ8IZ07 590 aa14.06□□□□□ -0.16
RABGGTA-204ENST00000558376 EN2P19622 333 aaPredicted RBP14.05□□□□□ -0.16
RABGGTA-204ENST00000558376 SPDYE2Q495Y8 402 aa14.05□□□□□ -0.16
RABGGTA-204ENST00000558376 LDHAL6AQ6ZMR3 332 aa14.05□□□□□ -0.16
RABGGTA-204ENST00000558376 TDRD7Q8NHU6 1098 aaKnown RBP14.05□□□□□ -0.16
RABGGTA-204ENST00000558376 CNKSR2Q8WXI2 1034 aa14.05□□□□□ -0.16
RABGGTA-204ENST00000558376 ARMC5Q96C12 935 aa14.05□□□□□ -0.16
RABGGTA-204ENST00000558376 MS4A4AQ96JQ5 239 aa14.05□□□□□ -0.16
RABGGTA-204ENST00000558376 TDRD3Q9H7E2 651 aaKnown RBP14.05□□□□□ -0.16
RABGGTA-204ENST00000558376 ELP3Q9H9T3 547 aa14.05□□□□□ -0.16
RABGGTA-204ENST00000558376 EFCC1Q9HA90 598 aa14.05□□□□□ -0.16
RABGGTA-204ENST00000558376 CEP290O15078 2479 aa14.04□□□□□ -0.16
RABGGTA-204ENST00000558376 SP3Q02447 781 aa14.04□□□□□ -0.16
RABGGTA-204ENST00000558376 OTUD7BQ6GQQ9 843 aa14.04□□□□□ -0.16
RABGGTA-204ENST00000558376 SSH1Q8WYL5 1049 aa14.04□□□□□ -0.16
RABGGTA-204ENST00000558376 OPTNQ96CV9 577 aa14.04□□□□□ -0.16
RABGGTA-204ENST00000558376 TEPSINQ96N21 525 aa14.04□□□□□ -0.16
RABGGTA-204ENST00000558376 TNNQ9UQP3 1299 aa14.04□□□□□ -0.16
RABGGTA-204ENST00000558376 GYG1P46976 350 aa14.04□□□□□ -0.16
RABGGTA-204ENST00000558376 HABP4Q5JVS0 413 aaKnown RBP14.04□□□□□ -0.16
RABGGTA-204ENST00000558376 B4GALNT3Q6L9W6 998 aa14.04□□□□□ -0.16
RABGGTA-204ENST00000558376 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.04□□□□□ -0.16
RABGGTA-204ENST00000558376 GCC1Q96CN9 775 aa14.04□□□□□ -0.16
RABGGTA-204ENST00000558376 CRBNQ96SW2 442 aa14.04□□□□□ -0.16
RABGGTA-204ENST00000558376 CNNM1Q9NRU3 951 aa14.04□□□□□ -0.16
RABGGTA-204ENST00000558376 TTF2Q9UNY4 1162 aaKnown RBP14.04□□□□□ -0.16
RABGGTA-204ENST00000558376 GRIK5Q16478 980 aa14.03□□□□□ -0.16
RABGGTA-204ENST00000558376 CCDC57Q2TAC2 916 aa14.03□□□□□ -0.16
RABGGTA-204ENST00000558376 MFSD14BQ5SR56 506 aa14.03□□□□□ -0.16
RABGGTA-204ENST00000558376 BRI3BPQ8WY22 251 aa14.03□□□□□ -0.16
RABGGTA-204ENST00000558376 FAM84BQ96KN1 310 aaPredicted RBP14.03□□□□□ -0.16
RABGGTA-204ENST00000558376 PUS3Q9BZE2 481 aaKnown RBP14.03□□□□□ -0.16
RABGGTA-204ENST00000558376 GRM8O00222 908 aa14.02□□□□□ -0.16
RABGGTA-204ENST00000558376 TAF7LQ5H9L4 462 aa14.02□□□□□ -0.16
RABGGTA-204ENST00000558376 DZIP1LQ8IYY4 767 aaKnown RBP14.02□□□□□ -0.16
RABGGTA-204ENST00000558376 TCP10L2B9ZVM9 353 aa14.01□□□□□ -0.17
RABGGTA-204ENST00000558376 HIBADHP31937 336 aaKnown RBP14.01□□□□□ -0.17
RABGGTA-204ENST00000558376 UBE4AQ14139 1066 aa14.01□□□□□ -0.17
RABGGTA-204ENST00000558376 TMEM39BQ9GZU3 492 aa14.01□□□□□ -0.17
RABGGTA-204ENST00000558376 SMC4Q9NTJ3 1288 aa14.01□□□□□ -0.17
RABGGTA-204ENST00000558376 PPP4R2Q9NY27 417 aa14.01□□□□□ -0.17
RABGGTA-204ENST00000558376 SERPINA10Q9UK55 444 aa14.01□□□□□ -0.17
RABGGTA-204ENST00000558376 CRKP46108 304 aa14.01□□□□□ -0.17
RABGGTA-204ENST00000558376 MAP3K9P80192 1104 aa14.01□□□□□ -0.17
RABGGTA-204ENST00000558376 TNFAIP1Q13829 316 aa14.01□□□□□ -0.17
RABGGTA-204ENST00000558376 PANK1Q8TE04 598 aa14.01□□□□□ -0.17
RABGGTA-204ENST00000558376 CLUAP1Q96AJ1 413 aa14.01□□□□□ -0.17
RABGGTA-204ENST00000558376 KAZALD1Q96I82 304 aa14.01□□□□□ -0.17
RABGGTA-204ENST00000558376 ARAP2Q8WZ64 1704 aa14.01□□□□□ -0.17
RABGGTA-204ENST00000558376 CCL15-CCL14A0A0B4J2E2 113 aa14□□□□□ -0.17
RABGGTA-204ENST00000558376 VGLL4Q14135 290 aa14□□□□□ -0.17
RABGGTA-204ENST00000558376 CCL15Q16663 113 aa14□□□□□ -0.17
RABGGTA-204ENST00000558376 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14□□□□□ -0.171e-6■□□□□ 11.1
RABGGTA-204ENST00000558376 BRCA2P51587 3418 aa14□□□□□ -0.17
RABGGTA-204ENST00000558376 ZSWIM8A7E2V4 1837 aa14□□□□□ -0.17
RABGGTA-204ENST00000558376 CT47B1P0C2W7 299 aaPredicted RBP13.99□□□□□ -0.17
RABGGTA-204ENST00000558376 TAF1CQ15572 869 aaPredicted RBP13.99□□□□□ -0.17
RABGGTA-204ENST00000558376 ERICH6BQ5W0A0 696 aa13.99□□□□□ -0.17
RABGGTA-204ENST00000558376 FAM43AQ8N2R8 423 aa13.99□□□□□ -0.17
RABGGTA-204ENST00000558376 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.99□□□□□ -0.17
RABGGTA-204ENST00000558376 SUCLG2Q96I99 432 aa13.99□□□□□ -0.17
RABGGTA-204ENST00000558376 ZNF333Q96JL9 665 aa13.99□□□□□ -0.17
RABGGTA-204ENST00000558376 NOB1Q9ULX3 412 aaKnown RBP13.99□□□□□ -0.17
RABGGTA-204ENST00000558376 RIPOR2Q9Y4F9 1068 aa13.99□□□□□ -0.17
RABGGTA-204ENST00000558376 PTCH2Q9Y6C5 1203 aa13.99□□□□□ -0.17
RABGGTA-204ENST00000558376 FBXO33Q7Z6M2 555 aa13.99□□□□□ -0.17
RABGGTA-204ENST00000558376 ZFYVE28Q9HCC9 887 aa13.99□□□□□ -0.17
RABGGTA-204ENST00000558376 C9orf78Q9NZ63 289 aaPredicted RBP13.99□□□□□ -0.17
RABGGTA-204ENST00000558376 IQSEC3Q9UPP2 1182 aaPredicted RBP13.99□□□□□ -0.17
RABGGTA-204ENST00000558376 RLBP1P12271 317 aa13.98□□□□□ -0.17
RABGGTA-204ENST00000558376 GTF2A2P52657 109 aa13.98□□□□□ -0.17
RABGGTA-204ENST00000558376 CACNB3P54284 484 aa13.98□□□□□ -0.17
RABGGTA-204ENST00000558376 OTUD5Q96G74 571 aa13.98□□□□□ -0.17
RABGGTA-204ENST00000558376 TRIOBPQ9H2D6 2365 aa13.97□□□□□ -0.17
RABGGTA-204ENST00000558376 ALDH1L1O75891 902 aa13.97□□□□□ -0.17
RABGGTA-204ENST00000558376 TMEM106CQ9BVX2 250 aa13.97□□□□□ -0.17
RABGGTA-204ENST00000558376 CHAF1AQ13111 956 aaPredicted RBP13.97□□□□□ -0.17
RABGGTA-204ENST00000558376 SLC4A10Q6U841 1118 aa13.97□□□□□ -0.17
RABGGTA-204ENST00000558376 ARHGAP39Q9C0H5 1083 aa13.97□□□□□ -0.17
RABGGTA-204ENST00000558376 COG6Q9Y2V7 657 aa13.97□□□□□ -0.17
RABGGTA-204ENST00000558376 CSADQ9Y600 493 aa13.97□□□□□ -0.17
RABGGTA-204ENST00000558376 SNCAIPQ9Y6H5 919 aa13.97□□□□□ -0.17
RABGGTA-204ENST00000558376 SPDYE5A6NIY4 337 aa13.96□□□□□ -0.17
RABGGTA-204ENST00000558376 NBPF7P0C2Y1 421 aaPredicted RBP13.96□□□□□ -0.17
RABGGTA-204ENST00000558376 TNNI2P48788 182 aa13.96□□□□□ -0.17
RABGGTA-204ENST00000558376 LRRC24Q50LG9 513 aa13.96□□□□□ -0.17
RABGGTA-204ENST00000558376 MRPL50Q8N5N7 158 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-204ENST00000558376 SRCIN1Q9C0H9 1055 aa13.96□□□□□ -0.17
RABGGTA-204ENST00000558376 MYCP01106 439 aaPredicted RBP13.95□□□□□ -0.18
RABGGTA-204ENST00000558376 FXR1P51114 621 aaKnown RBP eCLIP13.95□□□□□ -0.18
RABGGTA-204ENST00000558376 HDLBPQ00341 1268 aaKnown RBP13.95□□□□□ -0.18
RABGGTA-204ENST00000558376 SLC9C1Q4G0N8 1177 aa13.95□□□□□ -0.18
RABGGTA-204ENST00000558376 MROH5Q6ZUA9 1318 aa13.95□□□□□ -0.18
RABGGTA-204ENST00000558376 BTBD19C9JJ37 291 aa13.95□□□□□ -0.18
RABGGTA-204ENST00000558376 ARHGEF6Q15052 776 aa13.95□□□□□ -0.18
RABGGTA-204ENST00000558376 ALDH1L2Q3SY69 923 aa13.95□□□□□ -0.18
RABGGTA-204ENST00000558376 ZKSCAN2Q63HK3 967 aa13.95□□□□□ -0.18
RABGGTA-204ENST00000558376 SH3TC2Q8TF17 1288 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms