RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 SOX4Q06945 474 aaPredicted RBP5.43□□□□□ -1.54
FOXN3-216ENST00000557496 ECM1Q16610 540 aa5.43□□□□□ -1.54
FOXN3-216ENST00000557496 ZNF423Q2M1K9 1284 aa5.43□□□□□ -1.54
FOXN3-216ENST00000557496 SHISA5Q8N114 240 aa5.43□□□□□ -1.54
FOXN3-216ENST00000557496 GIMAP7Q8NHV1 300 aa5.43□□□□□ -1.54
FOXN3-216ENST00000557496 FBLIM1Q8WUP2 373 aa5.43□□□□□ -1.54
FOXN3-216ENST00000557496 LIN7BQ9HAP6 207 aa5.43□□□□□ -1.54
FOXN3-216ENST00000557496 USTQ9Y2C2 406 aa5.43□□□□□ -1.54
FOXN3-216ENST00000557496 H3BRB1 525 aa5.42□□□□□ -1.54
FOXN3-216ENST00000557496 CTSBP07858 339 aa5.42□□□□□ -1.54
FOXN3-216ENST00000557496 FOSL1P15407 271 aa5.42□□□□□ -1.54
FOXN3-216ENST00000557496 USP11P51784 963 aa5.42□□□□□ -1.54
FOXN3-216ENST00000557496 NFKBIBQ15653 356 aa5.42□□□□□ -1.54
FOXN3-216ENST00000557496 SPRED3Q2MJR0 410 aa5.42□□□□□ -1.54
FOXN3-216ENST00000557496 PAOXQ6QHF9 649 aa5.42□□□□□ -1.54
FOXN3-216ENST00000557496 METTL22Q9BUU2 404 aaPredicted RBP5.42□□□□□ -1.54
FOXN3-216ENST00000557496 OSBPL1AQ9BXW6 950 aa5.42□□□□□ -1.54
FOXN3-216ENST00000557496 TUT1Q9H6E5 874 aaKnown RBP5.42□□□□□ -1.54
FOXN3-216ENST00000557496 ATG3Q9NT62 314 aa5.42□□□□□ -1.54
FOXN3-216ENST00000557496 LEMD3Q9Y2U8 911 aa5.42□□□□□ -1.54
FOXN3-216ENST00000557496 B3GALT4O96024 378 aa5.41□□□□□ -1.54
FOXN3-216ENST00000557496 PRNPP04156 253 aa5.41□□□□□ -1.54
FOXN3-216ENST00000557496 CYP11A1P05108 521 aa5.41□□□□□ -1.54
FOXN3-216ENST00000557496 MAOBP27338 520 aa5.41□□□□□ -1.54
FOXN3-216ENST00000557496 ADMP35318 185 aa5.41□□□□□ -1.54
FOXN3-216ENST00000557496 SERPINB4P48594 390 aa5.41□□□□□ -1.54
FOXN3-216ENST00000557496 USPL1Q5W0Q7 1092 aa5.41□□□□□ -1.54
FOXN3-216ENST00000557496 ZAR1Q86SH2 424 aa5.41□□□□□ -1.54
FOXN3-216ENST00000557496 GATA6Q92908 595 aa5.41□□□□□ -1.54
FOXN3-216ENST00000557496 TRIM56Q9BRZ2 755 aaKnown RBP5.41□□□□□ -1.54
FOXN3-216ENST00000557496 YIPF2Q9BWQ6 316 aa5.41□□□□□ -1.54
FOXN3-216ENST00000557496 PRKAG2Q9UGJ0 569 aa5.41□□□□□ -1.54
FOXN3-216ENST00000557496 ADGRE2Q9UHX3 823 aa5.41□□□□□ -1.54
FOXN3-216ENST00000557496 BRPF3Q9ULD4 1205 aa5.41□□□□□ -1.54
FOXN3-216ENST00000557496 ACTL7BQ9Y614 415 aa5.41□□□□□ -1.54
FOXN3-216ENST00000557496 ITPKAP23677 461 aa5.4□□□□□ -1.54
FOXN3-216ENST00000557496 TXKP42681 527 aa5.4□□□□□ -1.54
FOXN3-216ENST00000557496 ARHGAP4P98171 946 aa5.4□□□□□ -1.54
FOXN3-216ENST00000557496 POU4F3Q15319 338 aa5.4□□□□□ -1.54
FOXN3-216ENST00000557496 HP1BP3Q5SSJ5 553 aaPredicted RBP5.4□□□□□ -1.54
FOXN3-216ENST00000557496 KIAA0319Q5VV43 1072 aa5.4□□□□□ -1.54
FOXN3-216ENST00000557496 B4GALNT3Q6L9W6 998 aa5.4□□□□□ -1.54
FOXN3-216ENST00000557496 NFXL1Q6ZNB6 911 aa5.4□□□□□ -1.54
FOXN3-216ENST00000557496 GLYCTKQ8IVS8 523 aa5.4□□□□□ -1.54
FOXN3-216ENST00000557496 TBC1D32Q96NH3 1257 aa5.4□□□□□ -1.54
FOXN3-216ENST00000557496 FAM129BQ96TA1 746 aa5.4□□□□□ -1.54
FOXN3-216ENST00000557496 ZNF576Q9H609 170 aa5.4□□□□□ -1.54
FOXN3-216ENST00000557496 CCDC39Q9UFE4 941 aa5.4□□□□□ -1.54
FOXN3-216ENST00000557496 ANGEL1Q9UNK9 670 aaKnown RBP5.4□□□□□ -1.54
FOXN3-216ENST00000557496 ECEL1O95672 775 aa5.39□□□□□ -1.55
FOXN3-216ENST00000557496 VSIG10LQ86VR7 867 aa5.39□□□□□ -1.55
FOXN3-216ENST00000557496 ABI1Q8IZP0 508 aa5.39□□□□□ -1.55
FOXN3-216ENST00000557496 KRTAP9-9Q9BYP9 154 aa5.39□□□□□ -1.55
FOXN3-216ENST00000557496 KRTAP9-4Q9BYQ2 154 aa5.39□□□□□ -1.55
FOXN3-216ENST00000557496 SEMA6CQ9H3T2 930 aa5.39□□□□□ -1.55
FOXN3-216ENST00000557496 GSX1Q9H4S2 264 aaPredicted RBP5.39□□□□□ -1.55
FOXN3-216ENST00000557496 ACSS3Q9H6R3 686 aa5.39□□□□□ -1.55
FOXN3-216ENST00000557496 NPHS2Q9NP85 383 aa5.39□□□□□ -1.55
FOXN3-216ENST00000557496 FAM105AQ9NUU6 356 aa5.39□□□□□ -1.55
FOXN3-216ENST00000557496 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.38□□□□□ -1.55
FOXN3-216ENST00000557496 FAM170BA6NMN3 283 aa5.38□□□□□ -1.55
FOXN3-216ENST00000557496 NDUFB5O43674 189 aa5.38□□□□□ -1.55
FOXN3-216ENST00000557496 IGHA2P01877 340 aa5.38□□□□□ -1.55
FOXN3-216ENST00000557496 NEFLP07196 543 aa5.38□□□□□ -1.55
FOXN3-216ENST00000557496 RAB6AP20340 208 aa5.38□□□□□ -1.55
FOXN3-216ENST00000557496 ORC1Q13415 861 aa5.38□□□□□ -1.55
FOXN3-216ENST00000557496 MAP7Q14244 749 aa5.38□□□□□ -1.55
FOXN3-216ENST00000557496 CORO1BQ9BR76 489 aa5.38□□□□□ -1.55
FOXN3-216ENST00000557496 ZFYVE1Q9HBF4 777 aa5.38□□□□□ -1.55
FOXN3-216ENST00000557496 ABCB6Q9NP58 842 aa5.38□□□□□ -1.55
FOXN3-216ENST00000557496 RNF114Q9Y508 228 aa5.38□□□□□ -1.55
FOXN3-216ENST00000557496 GPR182O15218 404 aa5.37□□□□□ -1.55
FOXN3-216ENST00000557496 CYP26A1O43174 497 aa5.37□□□□□ -1.55
FOXN3-216ENST00000557496 CPNE3O75131 537 aaKnown RBP5.37□□□□□ -1.55
FOXN3-216ENST00000557496 NFICP08651 508 aa5.37□□□□□ -1.55
FOXN3-216ENST00000557496 PTPN12Q05209 780 aaKnown RBP5.37□□□□□ -1.55
FOXN3-216ENST00000557496 PDE3BQ13370 1112 aa5.37□□□□□ -1.55
FOXN3-216ENST00000557496 AKAP4Q5JQC9 854 aa5.37□□□□□ -1.55
FOXN3-216ENST00000557496 PRPF40BQ6NWY9 871 aaKnown RBP5.37□□□□□ -1.55
FOXN3-216ENST00000557496 EHD4Q9H223 541 aa5.37□□□□□ -1.55
FOXN3-216ENST00000557496 AP4E1Q9UPM8 1137 aa5.37□□□□□ -1.55
FOXN3-216ENST00000557496 BTBD11A6QL63 1104 aa5.36□□□□□ -1.55
FOXN3-216ENST00000557496 SEZ6L2Q6UXD5 910 aa5.36□□□□□ -1.55
FOXN3-216ENST00000557496 CBLL1Q75N03 491 aa5.36□□□□□ -1.55
FOXN3-216ENST00000557496 ZNF765Q7L2R6 523 aa5.36□□□□□ -1.55
FOXN3-216ENST00000557496 DYMQ7RTS9 669 aa5.36□□□□□ -1.55
FOXN3-216ENST00000557496 DDX54Q8TDD1 881 aaKnown RBP5.36□□□□□ -1.55
FOXN3-216ENST00000557496 FBXL18Q96ME1 805 aa5.36□□□□□ -1.55
FOXN3-216ENST00000557496 CITED4Q96RK1 184 aa5.36□□□□□ -1.55
FOXN3-216ENST00000557496 WDR18Q9BV38 432 aa5.36□□□□□ -1.55
FOXN3-216ENST00000557496 RAD18Q9NS91 495 aa5.36□□□□□ -1.55
FOXN3-216ENST00000557496 BSDC1Q9NW68 430 aaPredicted RBP5.36□□□□□ -1.55
FOXN3-216ENST00000557496 SYNGAP1Q96PV0 1343 aa5.35□□□□□ -1.55
FOXN3-216ENST00000557496 EIF1AYO14602 144 aaKnown RBP5.35□□□□□ -1.55
FOXN3-216ENST00000557496 AOC2O75106 756 aa5.35□□□□□ -1.55
FOXN3-216ENST00000557496 CYP27A1Q02318 531 aa5.35□□□□□ -1.55
FOXN3-216ENST00000557496 AP3B2Q13367 1082 aa5.35□□□□□ -1.55
FOXN3-216ENST00000557496 TXNDC2Q86VQ3 553 aa5.35□□□□□ -1.55
FOXN3-216ENST00000557496 DNAJC25Q9H1X3 360 aa5.35□□□□□ -1.55
FOXN3-216ENST00000557496 C1GALT1Q9NS00 363 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms