RNA–Protein interactions for RNA: ENST00000556247.1

LRP1-210, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 611 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-210ENST00000556247 KIAA2012Q0VF49 1180 aa20.5■□□□□ 0.87
LRP1-210ENST00000556247 NECTIN1Q15223 517 aa20.5■□□□□ 0.87
LRP1-210ENST00000556247 CREB3L3Q68CJ9 461 aa20.5■□□□□ 0.87
LRP1-210ENST00000556247 NSUN4Q96CB9 384 aaKnown RBP20.5■□□□□ 0.87
LRP1-210ENST00000556247 PALD1Q9ULE6 856 aa20.5■□□□□ 0.87
LRP1-210ENST00000556247 SNED1Q8TER0 1413 aa20.5■□□□□ 0.87
LRP1-210ENST00000556247 MAGEB6P1A0A0J9YX57 407 aa20.49■□□□□ 0.87
LRP1-210ENST00000556247 PPIP5K2O43314 1243 aa20.49■□□□□ 0.87
LRP1-210ENST00000556247 MBD4O95243 580 aa20.49■□□□□ 0.87
LRP1-210ENST00000556247 GSTO1P78417 241 aa20.49■□□□□ 0.87
LRP1-210ENST00000556247 BECN1Q14457 450 aa20.49■□□□□ 0.87
LRP1-210ENST00000556247 AOC3Q16853 763 aa20.49■□□□□ 0.87
LRP1-210ENST00000556247 VPS53Q5VIR6 699 aa20.49■□□□□ 0.87
LRP1-210ENST00000556247 STRBPQ96SI9 672 aaKnown RBP20.49■□□□□ 0.87
LRP1-210ENST00000556247 VPS33BQ9H267 617 aa20.49■□□□□ 0.87
LRP1-210ENST00000556247 DBNDD1Q9H9R9 158 aa20.49■□□□□ 0.87
LRP1-210ENST00000556247 CTNNA3Q9UI47 895 aa20.49■□□□□ 0.87
LRP1-210ENST00000556247 SNX14Q9Y5W7 946 aa20.49■□□□□ 0.87
LRP1-210ENST00000556247 SLC27A2O14975 620 aa20.48■□□□□ 0.87
LRP1-210ENST00000556247 ECE2O60344 883 aa20.48■□□□□ 0.87
LRP1-210ENST00000556247 LDHCP07864 332 aa20.48■□□□□ 0.87
LRP1-210ENST00000556247 MFSD14BQ5SR56 506 aa20.48■□□□□ 0.87
LRP1-210ENST00000556247 TTLL5Q6EMB2 1281 aa20.48■□□□□ 0.87
LRP1-210ENST00000556247 KCNB2Q92953 911 aa20.48■□□□□ 0.87
LRP1-210ENST00000556247 ARMT1Q9H993 441 aa20.48■□□□□ 0.87
LRP1-210ENST00000556247 DAXXQ9UER7 740 aaPredicted RBP20.48■□□□□ 0.87
LRP1-210ENST00000556247 BCS1LQ9Y276 419 aa20.48■□□□□ 0.87
LRP1-210ENST00000556247 APPP05067 770 aa20.47■□□□□ 0.87
LRP1-210ENST00000556247 GNAT2P19087 354 aa20.47■□□□□ 0.87
LRP1-210ENST00000556247 MIGA1Q8NAN2 632 aa20.47■□□□□ 0.87
LRP1-210ENST00000556247 IL17RAQ96F46 866 aa20.47■□□□□ 0.87
LRP1-210ENST00000556247 CCDC88AQ3V6T2 1871 aa20.46■□□□□ 0.87
LRP1-210ENST00000556247 SLF2Q8IX21 1173 aa20.46■□□□□ 0.87
LRP1-210ENST00000556247 RASEFQ8IZ41 740 aa20.46■□□□□ 0.87
LRP1-210ENST00000556247 ZNF384Q8TF68 577 aa20.46■□□□□ 0.87
LRP1-210ENST00000556247 SUGT1Q9Y2Z0 365 aa20.46■□□□□ 0.87
LRP1-210ENST00000556247 PATL2C9JE40 543 aaKnown RBP20.45■□□□□ 0.86
LRP1-210ENST00000556247 GRIK5Q16478 980 aa20.45■□□□□ 0.86
LRP1-210ENST00000556247 ADGRA1Q86SQ6 560 aa20.45■□□□□ 0.86
LRP1-210ENST00000556247 LCORLQ8N3X6 602 aa20.45■□□□□ 0.86
LRP1-210ENST00000556247 LARGE2Q8N3Y3 721 aa20.45■□□□□ 0.86
LRP1-210ENST00000556247 NLGN2Q8NFZ4 835 aa20.45■□□□□ 0.86
LRP1-210ENST00000556247 NOL10Q9BSC4 688 aaKnown RBP20.45■□□□□ 0.86
LRP1-210ENST00000556247 ZNF277Q9NRM2 450 aaPredicted RBP20.45■□□□□ 0.86
LRP1-210ENST00000556247 KRT32Q14532 448 aa20.44■□□□□ 0.86
LRP1-210ENST00000556247 STRIP1Q5VSL9 837 aa20.44■□□□□ 0.86
LRP1-210ENST00000556247 NACAP1Q9BZK3 213 aa20.44■□□□□ 0.86
LRP1-210ENST00000556247 SLC4A4Q9Y6R1 1079 aa20.44■□□□□ 0.86
LRP1-210ENST00000556247 CHD4Q14839 1912 aa20.44■□□□□ 0.86
LRP1-210ENST00000556247 MAST2Q6P0Q8 1798 aa20.44■□□□□ 0.86
LRP1-210ENST00000556247 BRCA1P38398 1863 aaKnown RBP20.43■□□□□ 0.86
LRP1-210ENST00000556247 USP17L3A6NCW0 530 aa20.43■□□□□ 0.86
LRP1-210ENST00000556247 USP17L4A6NCW7 530 aa20.43■□□□□ 0.86
LRP1-210ENST00000556247 ST18O60284 1047 aa20.43■□□□□ 0.86
LRP1-210ENST00000556247 FGAP02671 866 aa20.43■□□□□ 0.86
LRP1-210ENST00000556247 PSMA5P28066 241 aa20.43■□□□□ 0.86
LRP1-210ENST00000556247 DYNLL1P63167 89 aaKnown RBP20.43■□□□□ 0.86
LRP1-210ENST00000556247 ALX1Q15699 326 aa20.43■□□□□ 0.86
LRP1-210ENST00000556247 TSGA10IPQ3SY00 556 aa20.43■□□□□ 0.86
LRP1-210ENST00000556247 USP17L1Q7RTZ2 530 aa20.43■□□□□ 0.86
LRP1-210ENST00000556247 HSCBQ8IWL3 235 aa20.43■□□□□ 0.86
LRP1-210ENST00000556247 IL27Q8NEV9 243 aa20.43■□□□□ 0.86
LRP1-210ENST00000556247 SNX21Q969T3 373 aa20.43■□□□□ 0.86
LRP1-210ENST00000556247 RIOK1Q9BRS2 568 aaKnown RBP20.43■□□□□ 0.86
LRP1-210ENST00000556247 RPAP1Q9BWH6 1393 aaPredicted RBP20.43■□□□□ 0.86
LRP1-210ENST00000556247 FOXP2O15409 715 aa20.42■□□□□ 0.86
LRP1-210ENST00000556247 BAG3O95817 575 aa20.42■□□□□ 0.86
LRP1-210ENST00000556247 IARSP41252 1262 aaKnown RBP20.42■□□□□ 0.86
LRP1-210ENST00000556247 NEK4P51957 841 aa20.42■□□□□ 0.86
LRP1-210ENST00000556247 FKBP1AP62942 108 aaKnown RBP20.42■□□□□ 0.86
LRP1-210ENST00000556247 IMMTQ16891 758 aaKnown RBP20.42■□□□□ 0.86
LRP1-210ENST00000556247 JAKMIP1Q96N16 626 aaKnown RBP20.42■□□□□ 0.86
LRP1-210ENST00000556247 TM6SF1Q9BZW5 370 aa20.42■□□□□ 0.86
LRP1-210ENST00000556247 TAOK3Q9H2K8 898 aa20.42■□□□□ 0.86
LRP1-210ENST00000556247 KCNQ5Q9NR82 932 aa20.42■□□□□ 0.86
LRP1-210ENST00000556247 PRKAB2O43741 272 aa20.41■□□□□ 0.86
LRP1-210ENST00000556247 CYP21A2P08686 494 aa20.41■□□□□ 0.86
LRP1-210ENST00000556247 DIXDC1Q155Q3 683 aa20.41■□□□□ 0.86
LRP1-210ENST00000556247 IFNL3Q8IZI9 196 aa20.41■□□□□ 0.86
LRP1-210ENST00000556247 CRNKL1Q9BZJ0 848 aaKnown RBP20.41■□□□□ 0.86
LRP1-210ENST00000556247 FHDC1Q9C0D6 1143 aaPredicted RBP20.41■□□□□ 0.86
LRP1-210ENST00000556247 NAPBQ9H115 298 aa20.41■□□□□ 0.86
LRP1-210ENST00000556247 AATFQ9NY61 560 aaKnown RBP eCLIP20.41■□□□□ 0.86
LRP1-210ENST00000556247 MROH7-TTC4A0A0A0MT08 1334 aa20.41■□□□□ 0.86
LRP1-210ENST00000556247 GSG1L2A8MUP6 293 aa20.4■□□□□ 0.86
LRP1-210ENST00000556247 ZNF213O14771 459 aa20.4■□□□□ 0.86
LRP1-210ENST00000556247 DACT2Q5SW24 774 aa20.4■□□□□ 0.86
LRP1-210ENST00000556247 NIM1KQ8IY84 436 aa20.4■□□□□ 0.86
LRP1-210ENST00000556247 CERS5Q8N5B7 392 aa20.4■□□□□ 0.86
LRP1-210ENST00000556247 FAM163AQ96GL9 167 aaPredicted RBP20.4■□□□□ 0.86
LRP1-210ENST00000556247 MXD3Q9BW11 206 aa20.4■□□□□ 0.86
LRP1-210ENST00000556247 TBC1D2Q9BYX2 928 aa20.4■□□□□ 0.86
LRP1-210ENST00000556247 F8W031 263 aaPredicted RBP20.39■□□□□ 0.85
LRP1-210ENST00000556247 CASTP20810 708 aaKnown RBP20.39■□□□□ 0.85
LRP1-210ENST00000556247 TDO2P48775 406 aa20.39■□□□□ 0.85
LRP1-210ENST00000556247 PPP4CP60510 307 aa20.39■□□□□ 0.85
LRP1-210ENST00000556247 ADCK5Q3MIX3 580 aa20.39■□□□□ 0.85
LRP1-210ENST00000556247 CERS3Q8IU89 383 aa20.39■□□□□ 0.85
LRP1-210ENST00000556247 UPF3BQ9BZI7 483 aaKnown RBP20.39■□□□□ 0.85
LRP1-210ENST00000556247 TTF2Q9UNY4 1162 aaKnown RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms