RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 CDKAL1Q5VV42 579 aa4.09□□□□□ -1.76
SEC23A-207ENST00000554615 ZNF530Q6P9A1 599 aaPredicted RBP4.09□□□□□ -1.76
SEC23A-207ENST00000554615 TRIM65Q6PJ69 517 aa4.09□□□□□ -1.76
SEC23A-207ENST00000554615 CDC37L1Q7L3B6 337 aa4.09□□□□□ -1.76
SEC23A-207ENST00000554615 MED15Q96RN5 788 aa4.09□□□□□ -1.76
SEC23A-207ENST00000554615 PDRG1Q9NUG6 133 aa4.09□□□□□ -1.76
SEC23A-207ENST00000554615 GREB1Q4ZG55 1949 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 NUTM2FA1L443 756 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 TRIM37O94972 964 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 CMA1P23946 247 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 E2F4Q16254 413 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 NUTM2GQ5VZR2 741 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 DPY19L2P1Q6NXN4 242 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 METTL16Q86W50 562 aaKnown RBP4.08□□□□□ -1.76
SEC23A-207ENST00000554615 TRIML1Q8N9V2 468 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 FAM227BQ96M60 508 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 NEUROD6Q96NK8 337 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 CYP46A1Q9Y6A2 500 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 ABCB11O95342 1321 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 SPATA31A1Q5TZJ5 1347 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 MROH5Q6ZUA9 1318 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 ZC3H4Q9UPT8 1303 aaKnown RBP4.08□□□□□ -1.76
SEC23A-207ENST00000554615 MROH7-TTC4A0A0A0MT08 1334 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 E7EWF7 191 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 NTSR2O95665 410 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 EHHADHQ08426 723 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 SF3B2Q13435 895 aaKnown RBP4.08□□□□□ -1.76
SEC23A-207ENST00000554615 SPATA31A5Q5VU36 1347 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 SPATA31A7Q8IWB4 1347 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 CERKQ8TCT0 537 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 LRRC59Q96AG4 307 aaKnown RBP4.08□□□□□ -1.76
SEC23A-207ENST00000554615 TANC1Q9C0D5 1861 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 LY9Q9HBG7 655 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 CNPY2Q9Y2B0 182 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 KIAA1217Q5T5P2 1943 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 ORC4O43929 436 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 SLC5A1P13866 664 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 NEK4P51957 841 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 GHRHRQ02643 423 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 ANKRD13DQ6ZTN6 518 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 RSRC2Q7L4I2 434 aaKnown RBP4.08□□□□□ -1.76
SEC23A-207ENST00000554615 KIFC2Q96AC6 838 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 GPATCH3Q96I76 525 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 INTS13Q9NVM9 706 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 TBC1D2BQ9UPU7 963 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 MGAMO43451 1857 aa4.08□□□□□ -1.76
SEC23A-207ENST00000554615 COL4A6Q14031 1691 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 ATXN2Q99700 1313 aaKnown RBP4.07□□□□□ -1.76
SEC23A-207ENST00000554615 IGKV6D-41A0A0C4DH26 115 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 APBB1O00213 710 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 FMNL1O95466 1100 aaPredicted RBP4.07□□□□□ -1.76
SEC23A-207ENST00000554615 CDK17Q00537 523 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 KIF23Q02241 960 aaPredicted RBP4.07□□□□□ -1.76
SEC23A-207ENST00000554615 CUL4BQ13620 913 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 MORC3Q14149 939 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 MCTP1Q6DN14 999 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 C1orf131Q8NDD1 294 aaKnown RBP4.07□□□□□ -1.76
SEC23A-207ENST00000554615 ZNF384Q8TF68 577 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 MIS18AQ9NYP9 233 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 KDM4FA0A1W2PPD8 638 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 SMTNL1A8MU46 457 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 GOLGA6L22H0YM25 854 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 CAMTA2O94983 1202 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 ZSCAN20P17040 1043 aaPredicted RBP4.07□□□□□ -1.76
SEC23A-207ENST00000554615 TNFRSF8P28908 595 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 FAM160A1Q05DH4 1040 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 DMTNQ08495 405 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 SLC39A14Q15043 492 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 TCEAL1Q15170 157 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 NPM2Q86SE8 214 aaKnown RBP4.07□□□□□ -1.76
SEC23A-207ENST00000554615 NLRP10Q86W26 655 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 CLASRPQ8N2M8 674 aaKnown RBP4.07□□□□□ -1.76
SEC23A-207ENST00000554615 NGDNQ8NEJ9 315 aaKnown RBP4.07□□□□□ -1.76
SEC23A-207ENST00000554615 OLIG1Q8TAK6 271 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 HNRNPLLQ8WVV9 542 aaKnown RBP4.07□□□□□ -1.76
SEC23A-207ENST00000554615 APPBP2Q92624 585 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 TMEM87BQ96K49 555 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 FEZ1Q99689 392 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 CCDC94Q9BW85 323 aaPredicted RBP4.07□□□□□ -1.76
SEC23A-207ENST00000554615 TTYH3Q9C0H2 523 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 CBX8Q9HC52 389 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 SH3GLB2Q9NR46 395 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 RBM27Q9P2N5 1060 aaKnown RBP4.07□□□□□ -1.76
SEC23A-207ENST00000554615 LIG1P18858 919 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 HNRNPH3P31942 346 aaKnown RBP4.07□□□□□ -1.76
SEC23A-207ENST00000554615 ITIH3Q06033 890 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 TYRO3Q06418 890 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 TFCP2Q12800 502 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 TTLL5Q6EMB2 1281 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 ZSCAN25Q6NSZ9 544 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 CLEC4GQ6UXB4 293 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 TTLL11Q8NHH1 800 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 XAGE3Q8WTP9 111 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 MTMR8Q96EF0 704 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 MBOAT7Q96N66 472 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 RIOK1Q9BRS2 568 aaKnown RBP4.07□□□□□ -1.76
SEC23A-207ENST00000554615 BRIP1Q9BX63 1249 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 DEFB129Q9H1M3 183 aa4.07□□□□□ -1.76
SEC23A-207ENST00000554615 FOXP1Q9H334 677 aaPredicted RBP4.07□□□□□ -1.76
SEC23A-207ENST00000554615 PSD3Q9NYI0 1048 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms