RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 ARMT1Q9H993 441 aa12.87□□□□□ -0.35
PFDN5-216ENST00000552341 ANKIB1Q9P2G1 1089 aa12.87□□□□□ -0.35
PFDN5-216ENST00000552341 ZNF213O14771 459 aa12.87□□□□□ -0.35
PFDN5-216ENST00000552341 BBOX1O75936 387 aa12.87□□□□□ -0.35
PFDN5-216ENST00000552341 GPSM2P81274 684 aa12.87□□□□□ -0.35
PFDN5-216ENST00000552341 MB21D2Q8IYB1 491 aaPredicted RBP12.87□□□□□ -0.35
PFDN5-216ENST00000552341 LCORLQ8N3X6 602 aa12.87□□□□□ -0.35
PFDN5-216ENST00000552341 BRIP1Q9BX63 1249 aa12.87□□□□□ -0.35
PFDN5-216ENST00000552341 ABCF2Q9UG63 623 aa12.87□□□□□ -0.35
PFDN5-216ENST00000552341 DTNBO60941 627 aa12.86□□□□□ -0.35
PFDN5-216ENST00000552341 IFNL3Q8IZI9 196 aa12.86□□□□□ -0.35
PFDN5-216ENST00000552341 NKX2-3Q8TAU0 364 aa12.86□□□□□ -0.35
PFDN5-216ENST00000552341 BRF1Q92994 677 aa12.86□□□□□ -0.35
PFDN5-216ENST00000552341 SMC3Q9UQE7 1217 aa12.86□□□□□ -0.35
PFDN5-216ENST00000552341 COL11A2P13942 1736 aaPredicted RBP12.85□□□□□ -0.35
PFDN5-216ENST00000552341 QSER1Q2KHR3 1735 aa12.85□□□□□ -0.35
PFDN5-216ENST00000552341 KIAA1551Q9HCM1 1747 aa12.85□□□□□ -0.35
PFDN5-216ENST00000552341 PRKAB2O43741 272 aa12.85□□□□□ -0.35
PFDN5-216ENST00000552341 SYT1P21579 422 aa12.85□□□□□ -0.35
PFDN5-216ENST00000552341 CYP7A1P22680 504 aa12.85□□□□□ -0.35
PFDN5-216ENST00000552341 GJB2P29033 226 aa12.85□□□□□ -0.35
PFDN5-216ENST00000552341 EVCP57679 992 aa12.85□□□□□ -0.35
PFDN5-216ENST00000552341 EZH2Q15910 746 aaKnown RBP12.85□□□□□ -0.35
PFDN5-216ENST00000552341 TBC1D10CQ8IV04 446 aa12.85□□□□□ -0.35
PFDN5-216ENST00000552341 MIGA1Q8NAN2 632 aa12.85□□□□□ -0.35
PFDN5-216ENST00000552341 TDRD7Q8NHU6 1098 aaKnown RBP12.85□□□□□ -0.35
PFDN5-216ENST00000552341 GTF3C6Q969F1 213 aa12.85□□□□□ -0.35
PFDN5-216ENST00000552341 NSUN4Q96CB9 384 aaKnown RBP12.85□□□□□ -0.35
PFDN5-216ENST00000552341 RIOK1Q9BRS2 568 aaKnown RBP12.85□□□□□ -0.35
PFDN5-216ENST00000552341 PODXL2Q9NZ53 605 aa12.85□□□□□ -0.35
PFDN5-216ENST00000552341 TIAM2Q8IVF5 1701 aa12.85□□□□□ -0.35
PFDN5-216ENST00000552341 MAST2Q6P0Q8 1798 aa12.85□□□□□ -0.35
PFDN5-216ENST00000552341 CHD4Q14839 1912 aa12.85□□□□□ -0.35
PFDN5-216ENST00000552341 APPP05067 770 aa12.85□□□□□ -0.35
PFDN5-216ENST00000552341 MMP10P09238 476 aa12.85□□□□□ -0.35
PFDN5-216ENST00000552341 SRGNP10124 158 aa12.85□□□□□ -0.35
PFDN5-216ENST00000552341 GNAT2P19087 354 aa12.85□□□□□ -0.35
PFDN5-216ENST00000552341 ANTXR2P58335 489 aa12.85□□□□□ -0.35
PFDN5-216ENST00000552341 CHST3Q7LGC8 479 aa12.85□□□□□ -0.35
PFDN5-216ENST00000552341 RAI14Q9P0K7 980 aa12.85□□□□□ -0.35
PFDN5-216ENST00000552341 CCDC88AQ3V6T2 1871 aa12.84□□□□□ -0.35
PFDN5-216ENST00000552341 EN1Q05925 392 aaPredicted RBP12.84□□□□□ -0.35
PFDN5-216ENST00000552341 CHAMP1Q96JM3 812 aa12.84□□□□□ -0.35
PFDN5-216ENST00000552341 GPR101Q96P66 508 aaPredicted RBP12.84□□□□□ -0.35
PFDN5-216ENST00000552341 TACC3Q9Y6A5 838 aa12.84□□□□□ -0.35
PFDN5-216ENST00000552341 WDR19Q8NEZ3 1342 aa12.83□□□□□ -0.35
PFDN5-216ENST00000552341 WDR33Q9C0J8 1336 aaKnown RBP12.83□□□□□ -0.35
PFDN5-216ENST00000552341 SALL1Q9NSC2 1324 aa12.83□□□□□ -0.35
PFDN5-216ENST00000552341 STX6O43752 255 aa12.83□□□□□ -0.35
PFDN5-216ENST00000552341 TRAK2O60296 914 aa12.83□□□□□ -0.35
PFDN5-216ENST00000552341 PFKFB2O60825 505 aa12.83□□□□□ -0.35
PFDN5-216ENST00000552341 PRDX5P30044 214 aa12.83□□□□□ -0.35
PFDN5-216ENST00000552341 MECOMQ03112 1051 aa12.83□□□□□ -0.35
PFDN5-216ENST00000552341 APOBRQ0VD83 1088 aa12.83□□□□□ -0.35
PFDN5-216ENST00000552341 STK3Q13188 491 aa12.83□□□□□ -0.35
PFDN5-216ENST00000552341 SLC15A2Q16348 729 aa12.83□□□□□ -0.35
PFDN5-216ENST00000552341 FOXD4L5Q5VV16 416 aaPredicted RBP12.83□□□□□ -0.35
PFDN5-216ENST00000552341 NCOA7Q8NI08 942 aa12.83□□□□□ -0.35
PFDN5-216ENST00000552341 FOXD4L4Q8WXT5 416 aaPredicted RBP12.83□□□□□ -0.35
PFDN5-216ENST00000552341 POLLQ9UGP5 575 aa12.83□□□□□ -0.35
PFDN5-216ENST00000552341 NSFL1CQ9UNZ2 370 aaKnown RBP12.83□□□□□ -0.35
PFDN5-216ENST00000552341 SLC4A4Q9Y6R1 1079 aa12.83□□□□□ -0.35
PFDN5-216ENST00000552341 ATP2B4P23634 1241 aa12.83□□□□□ -0.36
PFDN5-216ENST00000552341 MCM5P33992 734 aa12.83□□□□□ -0.36
PFDN5-216ENST00000552341 SCRN1Q12765 414 aa12.83□□□□□ -0.36
PFDN5-216ENST00000552341 NAA16Q6N069 864 aaPredicted RBP12.83□□□□□ -0.36
PFDN5-216ENST00000552341 TMC4Q7Z404 712 aa12.83□□□□□ -0.36
PFDN5-216ENST00000552341 SP8Q8IXZ3 490 aa12.83□□□□□ -0.36
PFDN5-216ENST00000552341 GPHNQ9NQX3 736 aaPredicted RBP12.83□□□□□ -0.36
PFDN5-216ENST00000552341 MAGEB6P1A0A0J9YX57 407 aa12.82□□□□□ -0.36
PFDN5-216ENST00000552341 PRC1O43663 620 aa12.82□□□□□ -0.36
PFDN5-216ENST00000552341 UFL1O94874 794 aa12.82□□□□□ -0.36
PFDN5-216ENST00000552341 PDIA3P30101 505 aaKnown RBP12.82□□□□□ -0.36
PFDN5-216ENST00000552341 CHAF1AQ13111 956 aaPredicted RBP12.82□□□□□ -0.36
PFDN5-216ENST00000552341 MSL1Q68DK7 614 aa12.82□□□□□ -0.36
PFDN5-216ENST00000552341 MCTP1Q6DN14 999 aa12.82□□□□□ -0.36
PFDN5-216ENST00000552341 TBC1D16Q8TBP0 767 aa12.82□□□□□ -0.36
PFDN5-216ENST00000552341 ZNF274Q96GC6 653 aaPredicted RBP12.82□□□□□ -0.36
PFDN5-216ENST00000552341 NAPBQ9H115 298 aa12.82□□□□□ -0.36
PFDN5-216ENST00000552341 LMBRD1Q9NUN5 540 aa12.82□□□□□ -0.36
PFDN5-216ENST00000552341 GGA1Q9UJY5 639 aa12.82□□□□□ -0.36
PFDN5-216ENST00000552341 PARP3Q9Y6F1 533 aa12.82□□□□□ -0.36
PFDN5-216ENST00000552341 DUOX1Q9NRD9 1551 aa12.82□□□□□ -0.36
PFDN5-216ENST00000552341 NEDD4P46934 1319 aa12.82□□□□□ -0.36
PFDN5-216ENST00000552341 ZSCAN22P10073 491 aaPredicted RBP12.81□□□□□ -0.36
PFDN5-216ENST00000552341 NPR1P16066 1061 aa12.81□□□□□ -0.36
PFDN5-216ENST00000552341 DYNLL1P63167 89 aaKnown RBP12.81□□□□□ -0.36
PFDN5-216ENST00000552341 TMED8Q6PL24 325 aaPredicted RBP12.81□□□□□ -0.36
PFDN5-216ENST00000552341 CYB5R4Q7L1T6 521 aa12.81□□□□□ -0.36
PFDN5-216ENST00000552341 ZNF804AQ7Z570 1209 aa12.81□□□□□ -0.36
PFDN5-216ENST00000552341 INCENPQ9NQS7 918 aa12.81□□□□□ -0.36
PFDN5-216ENST00000552341 MTMR6Q9Y217 621 aa12.81□□□□□ -0.36
PFDN5-216ENST00000552341 ATP6V0A2Q9Y487 856 aa12.81□□□□□ -0.36
PFDN5-216ENST00000552341 PPEF1O14829 653 aaPredicted RBP12.81□□□□□ -0.36
PFDN5-216ENST00000552341 CTDNEP1O95476 244 aa12.81□□□□□ -0.36
PFDN5-216ENST00000552341 IL1R1P14778 569 aa12.81□□□□□ -0.36
PFDN5-216ENST00000552341 FGD1P98174 961 aa12.81□□□□□ -0.36
PFDN5-216ENST00000552341 RALYLQ86SE5 291 aaKnown RBP12.81□□□□□ -0.36
PFDN5-216ENST00000552341 SMARCC2Q8TAQ2 1214 aa12.81□□□□□ -0.36
PFDN5-216ENST00000552341 SDR42E1Q8WUS8 393 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms