RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 SERPINA10Q9UK55 444 aa16.75■□□□□ 0.27
NUP188-211ENST00000550219 OTOFQ9HC10 1997 aa16.75■□□□□ 0.27
NUP188-211ENST00000550219 GPR25O00155 361 aa16.74■□□□□ 0.27
NUP188-211ENST00000550219 IREB2P48200 963 aaKnown RBP16.74■□□□□ 0.27
NUP188-211ENST00000550219 MAP3K11Q16584 847 aa16.74■□□□□ 0.27
NUP188-211ENST00000550219 FBXO33Q7Z6M2 555 aa16.74■□□□□ 0.27
NUP188-211ENST00000550219 CDAN1Q8IWY9 1227 aa16.74■□□□□ 0.27
NUP188-211ENST00000550219 DZIP1LQ8IYY4 767 aaKnown RBP16.74■□□□□ 0.27
NUP188-211ENST00000550219 MANSC4A6NHS7 340 aaPredicted RBP16.73■□□□□ 0.27
NUP188-211ENST00000550219 BCAMP50895 628 aa16.73■□□□□ 0.27
NUP188-211ENST00000550219 PUM3Q15397 648 aaKnown RBP16.73■□□□□ 0.27
NUP188-211ENST00000550219 KIF16BQ96L93 1317 aa16.72■□□□□ 0.27
NUP188-211ENST00000550219 IFIT1P09914 478 aaKnown RBP16.72■□□□□ 0.27
NUP188-211ENST00000550219 UBTFL1P0CB47 393 aaPredicted RBP16.72■□□□□ 0.27
NUP188-211ENST00000550219 ZBTB48P10074 688 aaPredicted RBP16.72■□□□□ 0.27
NUP188-211ENST00000550219 TNNI2P48788 182 aa16.72■□□□□ 0.27
NUP188-211ENST00000550219 RGS19P49795 217 aa16.72■□□□□ 0.27
NUP188-211ENST00000550219 CACNB3P54284 484 aa16.72■□□□□ 0.27
NUP188-211ENST00000550219 TBC1D22AQ8WUA7 517 aa16.72■□□□□ 0.27
NUP188-211ENST00000550219 ARHGAP45Q92619 1136 aa16.72■□□□□ 0.27
NUP188-211ENST00000550219 TMEM39BQ9GZU3 492 aa16.72■□□□□ 0.27
NUP188-211ENST00000550219 SIL1Q9H173 461 aa16.72■□□□□ 0.27
NUP188-211ENST00000550219 R3HDMLQ9H3Y0 253 aa16.72■□□□□ 0.27
NUP188-211ENST00000550219 ELP3Q9H9T3 547 aa16.72■□□□□ 0.27
NUP188-211ENST00000550219 EYA2O00167 538 aa16.71■□□□□ 0.27
NUP188-211ENST00000550219 USP2O75604 605 aaPredicted RBP16.71■□□□□ 0.27
NUP188-211ENST00000550219 SLC5A1P13866 664 aa16.71■□□□□ 0.27
NUP188-211ENST00000550219 IFNL1Q8IU54 200 aa16.71■□□□□ 0.27
NUP188-211ENST00000550219 ANKRD13AQ8IZ07 590 aa16.71■□□□□ 0.27
NUP188-211ENST00000550219 TEKT1Q969V4 418 aa16.71■□□□□ 0.27
NUP188-211ENST00000550219 NOB1Q9ULX3 412 aaKnown RBP16.71■□□□□ 0.27
NUP188-211ENST00000550219 HPS5Q9UPZ3 1129 aa16.71■□□□□ 0.27
NUP188-211ENST00000550219 MYH13Q9UKX3 1938 aa16.7■□□□□ 0.26
NUP188-211ENST00000550219 IGF2BP3O00425 579 aaKnown RBP eCLIP16.7■□□□□ 0.26
NUP188-211ENST00000550219 FKTNO75072 461 aa16.7■□□□□ 0.26
NUP188-211ENST00000550219 ALDH1A1P00352 501 aa16.7■□□□□ 0.26
NUP188-211ENST00000550219 GJA5P36382 358 aa16.7■□□□□ 0.26
NUP188-211ENST00000550219 RFX5P48382 616 aaPredicted RBP16.7■□□□□ 0.26
NUP188-211ENST00000550219 TMOD2Q9NZR1 351 aa16.7■□□□□ 0.26
NUP188-211ENST00000550219 LAMB1P07942 1786 aa16.69■□□□□ 0.26
NUP188-211ENST00000550219 IPO8O15397 1037 aaKnown RBP16.69■□□□□ 0.26
NUP188-211ENST00000550219 FGFR2P21802 821 aa16.69■□□□□ 0.26
NUP188-211ENST00000550219 OPTNQ96CV9 577 aa16.69■□□□□ 0.26
NUP188-211ENST00000550219 TEPSINQ96N21 525 aa16.69■□□□□ 0.26
NUP188-211ENST00000550219 API5Q9BZZ5 524 aaKnown RBP16.69■□□□□ 0.26
NUP188-211ENST00000550219 MAST3O60307 1309 aa16.69■□□□□ 0.26
NUP188-211ENST00000550219 PKN2Q16513 984 aaKnown RBP16.68■□□□□ 0.26
NUP188-211ENST00000550219 LPIN2Q92539 896 aa16.68■□□□□ 0.26
NUP188-211ENST00000550219 CFHR5Q9BXR6 569 aa16.68■□□□□ 0.26
NUP188-211ENST00000550219 LRRFIP2Q9Y608 721 aaKnown RBP16.68■□□□□ 0.26
NUP188-211ENST00000550219 RRP1P56182 461 aaKnown RBP16.67■□□□□ 0.26
NUP188-211ENST00000550219 INHBEP58166 350 aa16.67■□□□□ 0.26
NUP188-211ENST00000550219 HDLBPQ00341 1268 aaKnown RBP16.67■□□□□ 0.26
NUP188-211ENST00000550219 ATP2B3Q16720 1220 aa16.67■□□□□ 0.26
NUP188-211ENST00000550219 NOM1Q5C9Z4 860 aaKnown RBP16.67■□□□□ 0.26
NUP188-211ENST00000550219 ZKSCAN2Q63HK3 967 aa16.67■□□□□ 0.26
NUP188-211ENST00000550219 ATF7IPQ6VMQ6 1270 aa16.67■□□□□ 0.26
NUP188-211ENST00000550219 ATG9AQ7Z3C6 839 aa16.67■□□□□ 0.26
NUP188-211ENST00000550219 CNKSR2Q8WXI2 1034 aa16.67■□□□□ 0.26
NUP188-211ENST00000550219 SUPT16HQ9Y5B9 1047 aaKnown RBP16.67■□□□□ 0.26
NUP188-211ENST00000550219 UNCXA6NJT0 531 aa16.66■□□□□ 0.26
NUP188-211ENST00000550219 TRIM27P14373 513 aa16.66■□□□□ 0.26
NUP188-211ENST00000550219 VGLL4Q14135 290 aa16.66■□□□□ 0.26
NUP188-211ENST00000550219 FBXO46Q6PJ61 603 aaPredicted RBP16.66■□□□□ 0.26
NUP188-211ENST00000550219 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.66■□□□□ 0.26
NUP188-211ENST00000550219 ZDHHC15Q96MV8 337 aa16.66■□□□□ 0.26
NUP188-211ENST00000550219 MEIS3Q99687 375 aa16.66■□□□□ 0.26
NUP188-211ENST00000550219 PA2G4Q9UQ80 394 aaKnown RBP16.66■□□□□ 0.26
NUP188-211ENST00000550219 CSADQ9Y600 493 aa16.66■□□□□ 0.26
NUP188-211ENST00000550219 CRHR2Q13324 411 aa16.65■□□□□ 0.26
NUP188-211ENST00000550219 OTUD7BQ6GQQ9 843 aa16.65■□□□□ 0.26
NUP188-211ENST00000550219 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.65■□□□□ 0.26
NUP188-211ENST00000550219 WDR66Q8TBY9 1149 aa16.65■□□□□ 0.26
NUP188-211ENST00000550219 FRAT1Q92837 279 aaPredicted RBP16.65■□□□□ 0.26
NUP188-211ENST00000550219 OTUD5Q96G74 571 aa16.65■□□□□ 0.26
NUP188-211ENST00000550219 CEP126Q9P2H0 1117 aa16.65■□□□□ 0.26
NUP188-211ENST00000550219 TRIM17Q9Y577 477 aa16.65■□□□□ 0.26
NUP188-211ENST00000550219 CIAO1O76071 339 aa16.64■□□□□ 0.25
NUP188-211ENST00000550219 MAP3K9P80192 1104 aa16.64■□□□□ 0.25
NUP188-211ENST00000550219 DIXDC1Q155Q3 683 aa16.64■□□□□ 0.25
NUP188-211ENST00000550219 APOBEC3HQ6NTF7 200 aaKnown RBP16.64■□□□□ 0.25
NUP188-211ENST00000550219 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.64■□□□□ 0.25
NUP188-211ENST00000550219 WRNIP1Q96S55 665 aa16.64■□□□□ 0.25
NUP188-211ENST00000550219 SUGT1Q9Y2Z0 365 aa16.64■□□□□ 0.25
NUP188-211ENST00000550219 CCL15-CCL14A0A0B4J2E2 113 aa16.63■□□□□ 0.25
NUP188-211ENST00000550219 PRDX5P30044 214 aa16.63■□□□□ 0.25
NUP188-211ENST00000550219 PDE3AQ14432 1141 aa16.63■□□□□ 0.25
NUP188-211ENST00000550219 CCL15Q16663 113 aa16.63■□□□□ 0.25
NUP188-211ENST00000550219 CD99L2Q8TCZ2 262 aa16.63■□□□□ 0.25
NUP188-211ENST00000550219 PTPN18Q99952 460 aa16.63■□□□□ 0.25
NUP188-211ENST00000550219 GNL3LQ9NVN8 582 aaKnown RBP16.63■□□□□ 0.25
NUP188-211ENST00000550219 TNNQ9UQP3 1299 aa16.63■□□□□ 0.25
NUP188-211ENST00000550219 MS4A1P11836 297 aa16.62■□□□□ 0.25
NUP188-211ENST00000550219 ADORA1P30542 326 aa16.62■□□□□ 0.25
NUP188-211ENST00000550219 IL15P40933 162 aaPredicted RBP16.62■□□□□ 0.25
NUP188-211ENST00000550219 PHKA1P46020 1223 aa16.62■□□□□ 0.25
NUP188-211ENST00000550219 HHIPL2Q6UWX4 724 aa16.62■□□□□ 0.25
NUP188-211ENST00000550219 OTOP1Q7RTM1 612 aa16.62■□□□□ 0.25
NUP188-211ENST00000550219 FAM83AQ86UY5 434 aa16.62■□□□□ 0.25
NUP188-211ENST00000550219 BRI3BPQ8WY22 251 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms