RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 RAI14Q9P0K7 980 aa15.89■□□□□ 0.13
PRPF40B-209ENST00000548825 MARF1Q9Y4F3 1742 aaKnown RBP15.89■□□□□ 0.13
PRPF40B-209ENST00000548825 MST1RQ04912 1400 aa15.89■□□□□ 0.13
PRPF40B-209ENST00000548825 TNS3Q68CZ2 1445 aa15.89■□□□□ 0.13
PRPF40B-209ENST00000548825 SLC3A2P08195 630 aaKnown RBP15.88■□□□□ 0.13
PRPF40B-209ENST00000548825 FAM160A1Q05DH4 1040 aa15.88■□□□□ 0.13
PRPF40B-209ENST00000548825 CCDC69A6NI79 296 aa15.88■□□□□ 0.13
PRPF40B-209ENST00000548825 USP27XA6NNY8 438 aa15.88■□□□□ 0.13
PRPF40B-209ENST00000548825 SMIM22K7EJ46 135 aa15.88■□□□□ 0.13
PRPF40B-209ENST00000548825 DYNC1I1O14576 645 aa15.88■□□□□ 0.13
PRPF40B-209ENST00000548825 CTSWP56202 376 aa15.88■□□□□ 0.13
PRPF40B-209ENST00000548825 PPP4R3BQ5MIZ7 849 aa15.88■□□□□ 0.13
PRPF40B-209ENST00000548825 ATP6V1AP38606 617 aa15.88■□□□□ 0.13
PRPF40B-209ENST00000548825 ANTXR2P58335 489 aa15.88■□□□□ 0.13
PRPF40B-209ENST00000548825 SDR42E1Q8WUS8 393 aa15.88■□□□□ 0.13
PRPF40B-209ENST00000548825 ANO10Q9NW15 660 aa15.88■□□□□ 0.13
PRPF40B-209ENST00000548825 IFNKQ9P0W0 207 aa15.88■□□□□ 0.13
PRPF40B-209ENST00000548825 PDE6AP16499 860 aa15.87■□□□□ 0.13
PRPF40B-209ENST00000548825 ILDR1Q86SU0 546 aaPredicted RBP15.87■□□□□ 0.13
PRPF40B-209ENST00000548825 SLC12A7Q9Y666 1083 aa15.87■□□□□ 0.13
PRPF40B-209ENST00000548825 BAZ2BQ9UIF8 2168 aaKnown RBP15.87■□□□□ 0.13
PRPF40B-209ENST00000548825 IARSP41252 1262 aaKnown RBP15.87■□□□□ 0.13
PRPF40B-209ENST00000548825 MYRIPQ8NFW9 859 aa15.87■□□□□ 0.13
PRPF40B-209ENST00000548825 SMARCC2Q8TAQ2 1214 aa15.87■□□□□ 0.13
PRPF40B-209ENST00000548825 CHD2O14647 1828 aaKnown RBP15.86■□□□□ 0.13
PRPF40B-209ENST00000548825 ZBTB43O43298 467 aa15.86■□□□□ 0.13
PRPF40B-209ENST00000548825 MYSM1Q5VVJ2 828 aa15.86■□□□□ 0.13
PRPF40B-209ENST00000548825 NAA16Q6N069 864 aaPredicted RBP15.86■□□□□ 0.13
PRPF40B-209ENST00000548825 GIGYF2Q6Y7W6 1299 aaKnown RBP15.86■□□□□ 0.13
PRPF40B-209ENST00000548825 ISCA1Q9BUE6 129 aa15.86■□□□□ 0.13
PRPF40B-209ENST00000548825 CARD10Q9BWT7 1032 aa15.86■□□□□ 0.13
PRPF40B-209ENST00000548825 BCL2L12Q9HB09 334 aa15.86■□□□□ 0.13
PRPF40B-209ENST00000548825 NIP7Q9Y221 180 aaKnown RBP eCLIP15.86■□□□□ 0.13
PRPF40B-209ENST00000548825 MED1Q15648 1581 aaPredicted RBP15.86■□□□□ 0.13
PRPF40B-209ENST00000548825 SERPINC1P01008 464 aa15.86■□□□□ 0.13
PRPF40B-209ENST00000548825 PCCAP05165 728 aaPredicted RBP15.86■□□□□ 0.13
PRPF40B-209ENST00000548825 HOMER1Q86YM7 354 aa15.86■□□□□ 0.13
PRPF40B-209ENST00000548825 RCOR1Q9UKL0 485 aa15.86■□□□□ 0.13
PRPF40B-209ENST00000548825 SLC4A4Q9Y6R1 1079 aa15.86■□□□□ 0.13
PRPF40B-209ENST00000548825 ZNF202O95125 648 aa15.86■□□□□ 0.13
PRPF40B-209ENST00000548825 CDC27P30260 824 aa15.86■□□□□ 0.13
PRPF40B-209ENST00000548825 FAM182BQ5T319 152 aa15.86■□□□□ 0.13
PRPF40B-209ENST00000548825 FBXO18Q8NFZ0 1043 aa15.86■□□□□ 0.13
PRPF40B-209ENST00000548825 LLPHQ9BRT6 129 aaKnown RBP15.86■□□□□ 0.13
PRPF40B-209ENST00000548825 CYP2D7A0A087X1C5 515 aa15.85■□□□□ 0.13
PRPF40B-209ENST00000548825 ZNF827Q17R98 1081 aa15.85■□□□□ 0.13
PRPF40B-209ENST00000548825 KRT40Q6A162 431 aa15.85■□□□□ 0.13
PRPF40B-209ENST00000548825 ANGEL1Q9UNK9 670 aaKnown RBP15.85■□□□□ 0.13
PRPF40B-209ENST00000548825 MAP3K15Q6ZN16 1313 aa15.85■□□□□ 0.13
PRPF40B-209ENST00000548825 KDM3BQ7LBC6 1761 aa15.85■□□□□ 0.13
PRPF40B-209ENST00000548825 PIP4K2BP78356 416 aa15.85■□□□□ 0.13
PRPF40B-209ENST00000548825 PNOCQ13519 176 aa15.85■□□□□ 0.13
PRPF40B-209ENST00000548825 KLHL10Q6JEL2 608 aa15.85■□□□□ 0.13
PRPF40B-209ENST00000548825 ZNF274Q96GC6 653 aaPredicted RBP15.85■□□□□ 0.13
PRPF40B-209ENST00000548825 SLC4A9Q96Q91 983 aa15.85■□□□□ 0.13
PRPF40B-209ENST00000548825 FOXP2O15409 715 aa15.84■□□□□ 0.13
PRPF40B-209ENST00000548825 RANBP6O60518 1105 aaKnown RBP15.84■□□□□ 0.13
PRPF40B-209ENST00000548825 PDE8BO95263 885 aa15.84■□□□□ 0.13
PRPF40B-209ENST00000548825 ZFYP08048 801 aaPredicted RBP15.84■□□□□ 0.13
PRPF40B-209ENST00000548825 NEDD4P46934 1319 aa15.84■□□□□ 0.13
PRPF40B-209ENST00000548825 SYKP43405 635 aa15.84■□□□□ 0.13
PRPF40B-209ENST00000548825 SNW1Q13573 536 aaKnown RBP15.84■□□□□ 0.13
PRPF40B-209ENST00000548825 CFAP100Q494V2 611 aa15.84■□□□□ 0.13
PRPF40B-209ENST00000548825 ANO1Q5XXA6 986 aa15.84■□□□□ 0.13
PRPF40B-209ENST00000548825 CCDC112Q8NEF3 446 aa15.84■□□□□ 0.13
PRPF40B-209ENST00000548825 NAT10Q9H0A0 1025 aaKnown RBP15.84■□□□□ 0.13
PRPF40B-209ENST00000548825 COBLO75128 1261 aa15.84■□□□□ 0.13
PRPF40B-209ENST00000548825 ATP1A3P13637 1013 aa15.84■□□□□ 0.13
PRPF40B-209ENST00000548825 PFKFB1P16118 471 aa15.84■□□□□ 0.13
PRPF40B-209ENST00000548825 U2AF2P26368 475 aaKnown RBP eCLIP15.84■□□□□ 0.13
PRPF40B-209ENST00000548825 GYG1P46976 350 aa15.84■□□□□ 0.13
PRPF40B-209ENST00000548825 MAP3K12Q12852 859 aa15.84■□□□□ 0.13
PRPF40B-209ENST00000548825 RASGRF1Q13972 1273 aa15.84■□□□□ 0.13
PRPF40B-209ENST00000548825 LINC00301Q8NCQ3 95 aa15.84■□□□□ 0.13
PRPF40B-209ENST00000548825 ERICH2A1L162 156 aa15.83■□□□□ 0.13
PRPF40B-209ENST00000548825 BTBD18B2RXH4 712 aa15.83■□□□□ 0.13
PRPF40B-209ENST00000548825 CDK11BP21127 795 aaKnown RBP15.83■□□□□ 0.13
PRPF40B-209ENST00000548825 GRAMD1CQ8IYS0 662 aa15.83■□□□□ 0.13
PRPF40B-209ENST00000548825 PDCL2Q8N4E4 241 aa15.83■□□□□ 0.13
PRPF40B-209ENST00000548825 HPS5Q9UPZ3 1129 aa15.83■□□□□ 0.13
PRPF40B-209ENST00000548825 XPO4Q9C0E2 1151 aaKnown RBP15.83■□□□□ 0.12
PRPF40B-209ENST00000548825 RIPOR2Q9Y4F9 1068 aa15.83■□□□□ 0.12
PRPF40B-209ENST00000548825 GUCY1A2P33402 732 aa15.83■□□□□ 0.12
PRPF40B-209ENST00000548825 ADD2P35612 726 aa15.83■□□□□ 0.12
PRPF40B-209ENST00000548825 SUSD4Q5VX71 490 aa15.83■□□□□ 0.12
PRPF40B-209ENST00000548825 MFSD6Q6ZSS7 791 aa15.83■□□□□ 0.12
PRPF40B-209ENST00000548825 MB21D2Q8IYB1 491 aaPredicted RBP15.83■□□□□ 0.12
PRPF40B-209ENST00000548825 SPATA5Q8NB90 893 aa15.83■□□□□ 0.12
PRPF40B-209ENST00000548825 STAMQ92783 540 aa15.83■□□□□ 0.12
PRPF40B-209ENST00000548825 ZSWIM5Q9P217 1185 aa15.83■□□□□ 0.12
PRPF40B-209ENST00000548825 FOXN1O15353 648 aa15.82■□□□□ 0.12
PRPF40B-209ENST00000548825 WDHD1O75717 1129 aaPredicted RBP15.82■□□□□ 0.12
PRPF40B-209ENST00000548825 CIAO1O76071 339 aa15.82■□□□□ 0.12
PRPF40B-209ENST00000548825 CYP7A1P22680 504 aa15.82■□□□□ 0.12
PRPF40B-209ENST00000548825 SLC5A1P13866 664 aa15.82■□□□□ 0.12
PRPF40B-209ENST00000548825 PTPN14Q15678 1187 aa15.82■□□□□ 0.12
PRPF40B-209ENST00000548825 APOA5Q6Q788 366 aa15.82■□□□□ 0.12
PRPF40B-209ENST00000548825 TDRD7Q8NHU6 1098 aaKnown RBP15.82■□□□□ 0.12
PRPF40B-209ENST00000548825 PALLDQ8WX93 1383 aa15.82■□□□□ 0.12
PRPF40B-209ENST00000548825 IGHMBP2P38935 993 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms