RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 ATP10AO60312 1499 aa10.42□□□□□ -0.74
CHPT1-203ENST00000546873 NUP153P49790 1475 aaKnown RBP10.42□□□□□ -0.74
CHPT1-203ENST00000546873 C9orf84Q5VXU9 1444 aa10.41□□□□□ -0.74
CHPT1-203ENST00000546873 LINC01387J3KSC0 135 aa10.41□□□□□ -0.74
CHPT1-203ENST00000546873 NOS3P29474 1203 aa10.41□□□□□ -0.74
CHPT1-203ENST00000546873 PDE4CQ08493 712 aa10.41□□□□□ -0.74
CHPT1-203ENST00000546873 C1orf127Q8N9H9 656 aa10.41□□□□□ -0.74
CHPT1-203ENST00000546873 NCOA2Q15596 1464 aa10.41□□□□□ -0.74
CHPT1-203ENST00000546873 CARNS1A5YM72 827 aa10.4□□□□□ -0.74
CHPT1-203ENST00000546873 ZMYM1Q5SVZ6 1142 aa10.4□□□□□ -0.74
CHPT1-203ENST00000546873 TMEM130Q8N3G9 435 aa10.4□□□□□ -0.74
CHPT1-203ENST00000546873 CDK11AQ9UQ88 783 aaPredicted RBP10.4□□□□□ -0.74
CHPT1-203ENST00000546873 ITSN2Q9NZM3 1697 aa10.4□□□□□ -0.74
CHPT1-203ENST00000546873 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.39□□□□□ -0.75
CHPT1-203ENST00000546873 A6NHS1 94 aa10.39□□□□□ -0.75
CHPT1-203ENST00000546873 PHACTR2O75167 634 aa10.39□□□□□ -0.75
CHPT1-203ENST00000546873 CDC25BP30305 580 aa10.39□□□□□ -0.75
CHPT1-203ENST00000546873 PHLDB3Q6NSJ2 640 aa10.39□□□□□ -0.75
CHPT1-203ENST00000546873 SALL4Q9UJQ4 1053 aa10.39□□□□□ -0.75
CHPT1-203ENST00000546873 MYOM3Q5VTT5 1437 aa10.39□□□□□ -0.75
CHPT1-203ENST00000546873 FGD6Q6ZV73 1430 aa10.39□□□□□ -0.75
CHPT1-203ENST00000546873 SCAPERQ9BY12 1400 aa10.39□□□□□ -0.75
CHPT1-203ENST00000546873 CFAP74Q9C0B2 1584 aa10.39□□□□□ -0.75
CHPT1-203ENST00000546873 C3P01024 1663 aa10.38□□□□□ -0.75
CHPT1-203ENST00000546873 KIF14Q15058 1648 aa10.38□□□□□ -0.75
CHPT1-203ENST00000546873 CAMSAP1Q5T5Y3 1602 aa10.38□□□□□ -0.75
CHPT1-203ENST00000546873 ZNF211Q13398 564 aaPredicted RBP10.38□□□□□ -0.75
CHPT1-203ENST00000546873 SNX29Q8TEQ0 813 aa10.38□□□□□ -0.75
CHPT1-203ENST00000546873 SSBP4Q9BWG4 385 aaPredicted RBP10.38□□□□□ -0.75
CHPT1-203ENST00000546873 ANO2Q9NQ90 1003 aa10.38□□□□□ -0.75
CHPT1-203ENST00000546873 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.38□□□□□ -0.75
CHPT1-203ENST00000546873 EDN3P14138 238 aa10.37□□□□□ -0.75
CHPT1-203ENST00000546873 CD68P34810 354 aaPredicted RBP10.37□□□□□ -0.75
CHPT1-203ENST00000546873 PRSS36Q5K4E3 855 aa10.37□□□□□ -0.75
CHPT1-203ENST00000546873 TXNDC11Q6PKC3 985 aa10.37□□□□□ -0.75
CHPT1-203ENST00000546873 KLHL23Q8NBE8 558 aa10.37□□□□□ -0.75
CHPT1-203ENST00000546873 POP1Q99575 1024 aaKnown RBP10.37□□□□□ -0.75
CHPT1-203ENST00000546873 EGFL7Q9UHF1 273 aa10.37□□□□□ -0.75
CHPT1-203ENST00000546873 F8W735 103 aaPredicted RBP10.36□□□□□ -0.75
CHPT1-203ENST00000546873 PDE2AO00408 941 aaPredicted RBP10.36□□□□□ -0.75
CHPT1-203ENST00000546873 FSCN2O14926 492 aa10.36□□□□□ -0.75
CHPT1-203ENST00000546873 ITGB7P26010 798 aa10.36□□□□□ -0.75
CHPT1-203ENST00000546873 ADAM19Q9H013 955 aa10.36□□□□□ -0.75
CHPT1-203ENST00000546873 SH2B1Q9NRF2 756 aaPredicted RBP10.36□□□□□ -0.75
CHPT1-203ENST00000546873 PTPN23Q9H3S7 1636 aa10.36□□□□□ -0.75
CHPT1-203ENST00000546873 TROQ12816 1431 aaPredicted RBP10.35□□□□□ -0.75
CHPT1-203ENST00000546873 TRAPPC8Q9Y2L5 1435 aa10.35□□□□□ -0.75
CHPT1-203ENST00000546873 SCO2A0A1W2PP80 73 aa10.35□□□□□ -0.75
CHPT1-203ENST00000546873 TNFRSF21O75509 655 aa10.35□□□□□ -0.75
CHPT1-203ENST00000546873 CCER1Q8TC90 406 aaPredicted RBP10.35□□□□□ -0.75
CHPT1-203ENST00000546873 MEGF10Q96KG7 1140 aa10.35□□□□□ -0.75
CHPT1-203ENST00000546873 SEC31BQ9NQW1 1179 aa10.35□□□□□ -0.75
CHPT1-203ENST00000546873 DZANK1Q9NVP4 752 aa10.35□□□□□ -0.75
CHPT1-203ENST00000546873 SETD1BQ9UPS6 1966 aaKnown RBP10.34□□□□□ -0.75
CHPT1-203ENST00000546873 H3BRJ5 948 aa10.34□□□□□ -0.75
CHPT1-203ENST00000546873 FZD6O60353 706 aa10.34□□□□□ -0.75
CHPT1-203ENST00000546873 ALX3O95076 343 aa10.34□□□□□ -0.75
CHPT1-203ENST00000546873 GLB1P16278 677 aa10.34□□□□□ -0.75
CHPT1-203ENST00000546873 EPHA1P21709 976 aa10.34□□□□□ -0.75
CHPT1-203ENST00000546873 ARL4DP49703 201 aa10.34□□□□□ -0.75
CHPT1-203ENST00000546873 GLYCTKQ8IVS8 523 aa10.34□□□□□ -0.75
CHPT1-203ENST00000546873 Q8N3U1 123 aa10.34□□□□□ -0.75
CHPT1-203ENST00000546873 GALNT11Q8NCW6 608 aa10.34□□□□□ -0.75
CHPT1-203ENST00000546873 RGS17Q9UGC6 210 aaPredicted RBP10.34□□□□□ -0.75
CHPT1-203ENST00000546873 MIA2Q96PC5 1412 aa10.33□□□□□ -0.76
CHPT1-203ENST00000546873 PLEKHD1A6NEE1 506 aa10.33□□□□□ -0.76
CHPT1-203ENST00000546873 ICMTO60725 284 aa10.33□□□□□ -0.76
CHPT1-203ENST00000546873 FAM50AQ14320 339 aaKnown RBP10.33□□□□□ -0.76
CHPT1-203ENST00000546873 ACAD11Q709F0 780 aa10.33□□□□□ -0.76
CHPT1-203ENST00000546873 WNT8BQ93098 351 aa10.33□□□□□ -0.76
CHPT1-203ENST00000546873 OSMRQ99650 979 aa10.33□□□□□ -0.76
CHPT1-203ENST00000546873 CARD10Q9BWT7 1032 aa10.33□□□□□ -0.76
CHPT1-203ENST00000546873 CEP41Q9BYV8 373 aa10.33□□□□□ -0.76
CHPT1-203ENST00000546873 CHRDQ9H2X0 955 aa10.33□□□□□ -0.76
CHPT1-203ENST00000546873 BRPF3Q9ULD4 1205 aa10.33□□□□□ -0.76
CHPT1-203ENST00000546873 H3BRB1 525 aa10.32□□□□□ -0.76
CHPT1-203ENST00000546873 DUOXA2Q1HG44 320 aa10.32□□□□□ -0.76
CHPT1-203ENST00000546873 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.32□□□□□ -0.76
CHPT1-203ENST00000546873 DZIP1LQ8IYY4 767 aaKnown RBP10.32□□□□□ -0.76
CHPT1-203ENST00000546873 TUT1Q9H6E5 874 aaKnown RBP10.32□□□□□ -0.76
CHPT1-203ENST00000546873 CCDC87Q9NVE4 849 aa10.32□□□□□ -0.76
CHPT1-203ENST00000546873 AMOTL2Q9Y2J4 779 aa10.32□□□□□ -0.76
CHPT1-203ENST00000546873 TCOF1Q13428 1488 aaKnown RBP10.31□□□□□ -0.76
CHPT1-203ENST00000546873 EREGO14944 169 aa10.31□□□□□ -0.76
CHPT1-203ENST00000546873 NEFLP07196 543 aa10.31□□□□□ -0.76
CHPT1-203ENST00000546873 AGGF1Q8N302 714 aaeCLIP10.31□□□□□ -0.76
CHPT1-203ENST00000546873 TMEM102Q8N9M5 508 aaPredicted RBP10.31□□□□□ -0.76
CHPT1-203ENST00000546873 OSGEPQ9NPF4 335 aa10.31□□□□□ -0.76
CHPT1-203ENST00000546873 DIP2CQ9Y2E4 1556 aa10.31□□□□□ -0.76
CHPT1-203ENST00000546873 TOM1O60784 492 aa10.3□□□□□ -0.76
CHPT1-203ENST00000546873 ACPPP15309 386 aa10.3□□□□□ -0.76
CHPT1-203ENST00000546873 FOXD4L6Q3SYB3 417 aaPredicted RBP10.3□□□□□ -0.76
CHPT1-203ENST00000546873 FOXD4L3Q6VB84 417 aaPredicted RBP10.3□□□□□ -0.76
CHPT1-203ENST00000546873 GJD3Q8N144 294 aa10.3□□□□□ -0.76
CHPT1-203ENST00000546873 AFAP1Q8N556 730 aa10.3□□□□□ -0.76
CHPT1-203ENST00000546873 FOXD3Q9UJU5 478 aaPredicted RBP10.3□□□□□ -0.76
CHPT1-203ENST00000546873 NFKBIEO00221 500 aa10.29□□□□□ -0.76
CHPT1-203ENST00000546873 NDUFB5O43674 189 aa10.29□□□□□ -0.76
CHPT1-203ENST00000546873 PRR23CQ6ZRP0 262 aa10.29□□□□□ -0.76
CHPT1-203ENST00000546873 SLC7A3Q8WY07 619 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms