RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 LOC105371045A0A1W2PR82 267 aa9.93□□□□□ -0.82
LEMD3-206ENST00000545026 M0R082 166 aa9.93□□□□□ -0.82
LEMD3-206ENST00000545026 LILRB5O75023 590 aa9.93□□□□□ -0.82
LEMD3-206ENST00000545026 ATF4P18848 351 aaPredicted RBP9.93□□□□□ -0.82
LEMD3-206ENST00000545026 HGSNATQ68CP4 663 aa9.93□□□□□ -0.82
LEMD3-206ENST00000545026 C8orf86Q6ZUL3 223 aa9.93□□□□□ -0.82
LEMD3-206ENST00000545026 VPS37DQ86XT2 251 aa9.93□□□□□ -0.82
LEMD3-206ENST00000545026 ZNF417Q8TAU3 575 aa9.93□□□□□ -0.82
LEMD3-206ENST00000545026 ZNF587Q96SQ5 575 aaPredicted RBP9.93□□□□□ -0.82
LEMD3-206ENST00000545026 NT5C1AQ9BXI3 368 aa9.93□□□□□ -0.82
LEMD3-206ENST00000545026 SAMM50Q9Y512 469 aa9.93□□□□□ -0.82
LEMD3-206ENST00000545026 SUPT16HQ9Y5B9 1047 aaKnown RBP9.93□□□□□ -0.82
LEMD3-206ENST00000545026 ARNTP27540 789 aa9.92□□□□□ -0.82
LEMD3-206ENST00000545026 CDC25BP30305 580 aa9.92□□□□□ -0.82
LEMD3-206ENST00000545026 SULF2Q8IWU5 870 aa9.92□□□□□ -0.82
LEMD3-206ENST00000545026 TRIM42Q8IWZ5 723 aa9.92□□□□□ -0.82
LEMD3-206ENST00000545026 GOLM1Q8NBJ4 401 aa9.92□□□□□ -0.82
LEMD3-206ENST00000545026 SOX17Q9H6I2 414 aaPredicted RBP9.92□□□□□ -0.82
LEMD3-206ENST00000545026 LRRC4BQ9NT99 713 aa9.92□□□□□ -0.82
LEMD3-206ENST00000545026 CYP8B1Q9UNU6 501 aa9.92□□□□□ -0.82
LEMD3-206ENST00000545026 PPME1Q9Y570 386 aa9.92□□□□□ -0.82
LEMD3-206ENST00000545026 PCDHB5Q9Y5E4 795 aa9.92□□□□□ -0.82
LEMD3-206ENST00000545026 SHISA8B8ZZ34 492 aa9.91□□□□□ -0.82
LEMD3-206ENST00000545026 BCRP11274 1271 aa9.91□□□□□ -0.82
LEMD3-206ENST00000545026 SNAP47Q5SQN1 464 aa9.91□□□□□ -0.82
LEMD3-206ENST00000545026 PRDM6Q9NQX0 595 aa9.91□□□□□ -0.82
LEMD3-206ENST00000545026 LINC01387J3KSC0 135 aa9.9□□□□□ -0.82
LEMD3-206ENST00000545026 FGRP09769 529 aa9.9□□□□□ -0.82
LEMD3-206ENST00000545026 ATP2B1P20020 1258 aa9.9□□□□□ -0.82
LEMD3-206ENST00000545026 PIP4K2BP78356 416 aa9.9□□□□□ -0.82
LEMD3-206ENST00000545026 ZNF252P-AS1Q0IIN9 211 aa9.9□□□□□ -0.82
LEMD3-206ENST00000545026 TXNDC11Q6PKC3 985 aa9.9□□□□□ -0.82
LEMD3-206ENST00000545026 ILDR2Q71H61 639 aa9.9□□□□□ -0.82
LEMD3-206ENST00000545026 PDZD3Q86UT5 571 aa9.9□□□□□ -0.82
LEMD3-206ENST00000545026 CCDC84Q86UT8 332 aaPredicted RBP9.9□□□□□ -0.82
LEMD3-206ENST00000545026 MCF2L2Q86YR7 1114 aa9.9□□□□□ -0.82
LEMD3-206ENST00000545026 GRIN3AQ8TCU5 1115 aa9.9□□□□□ -0.82
LEMD3-206ENST00000545026 DDX54Q8TDD1 881 aaKnown RBP9.9□□□□□ -0.82
LEMD3-206ENST00000545026 WNT8BQ93098 351 aa9.9□□□□□ -0.82
LEMD3-206ENST00000545026 SPATA32Q96LK8 384 aa9.9□□□□□ -0.82
LEMD3-206ENST00000545026 UBP1Q9NZI7 540 aa9.9□□□□□ -0.82
LEMD3-206ENST00000545026 GMPRP36959 345 aa9.89□□□□□ -0.83
LEMD3-206ENST00000545026 CRKP46108 304 aa9.89□□□□□ -0.83
LEMD3-206ENST00000545026 COL9A3Q14050 684 aaPredicted RBP9.89□□□□□ -0.83
LEMD3-206ENST00000545026 LRRC14Q15048 493 aa9.89□□□□□ -0.83
LEMD3-206ENST00000545026 MSL1Q68DK7 614 aa9.89□□□□□ -0.83
LEMD3-206ENST00000545026 LLGL2Q6P1M3 1020 aa9.89□□□□□ -0.83
LEMD3-206ENST00000545026 BNC2Q6ZN30 1099 aaPredicted RBP9.89□□□□□ -0.83
LEMD3-206ENST00000545026 FAM196AQ6ZSG2 479 aa9.89□□□□□ -0.83
LEMD3-206ENST00000545026 WFDC8Q8IUA0 241 aa9.89□□□□□ -0.83
LEMD3-206ENST00000545026 DHX38Q92620 1227 aaKnown RBP9.89□□□□□ -0.83
LEMD3-206ENST00000545026 SEC16BQ96JE7 1060 aa9.89□□□□□ -0.83
LEMD3-206ENST00000545026 EMILIN2Q9BXX0 1053 aa9.89□□□□□ -0.83
LEMD3-206ENST00000545026 TM4SF5O14894 197 aa9.88□□□□□ -0.83
LEMD3-206ENST00000545026 FSCN2O14926 492 aa9.88□□□□□ -0.83
LEMD3-206ENST00000545026 CELA2BP08218 269 aaPredicted RBP9.88□□□□□ -0.83
LEMD3-206ENST00000545026 GSTM4Q03013 218 aa9.88□□□□□ -0.83
LEMD3-206ENST00000545026 C19orf57Q0VDD7 668 aa9.88□□□□□ -0.83
LEMD3-206ENST00000545026 AP3B2Q13367 1082 aa9.88□□□□□ -0.83
LEMD3-206ENST00000545026 LYPD4Q6UWN0 246 aa9.88□□□□□ -0.83
LEMD3-206ENST00000545026 SLC7A3Q8WY07 619 aa9.88□□□□□ -0.83
LEMD3-206ENST00000545026 ARMC5Q96C12 935 aa9.88□□□□□ -0.83
LEMD3-206ENST00000545026 NRSN2Q9GZP1 204 aa9.88□□□□□ -0.83
LEMD3-206ENST00000545026 MIR1-1HGQ9H1L0 117 aa9.88□□□□□ -0.83
LEMD3-206ENST00000545026 CBX8Q9HC52 389 aa9.88□□□□□ -0.83
LEMD3-206ENST00000545026 GINM1Q9NU53 330 aa9.88□□□□□ -0.83
LEMD3-206ENST00000545026 FAM221AA4D161 298 aa9.87□□□□□ -0.83
LEMD3-206ENST00000545026 F13A1P00488 732 aa9.87□□□□□ -0.83
LEMD3-206ENST00000545026 SEPT6Q14141 434 aa9.87□□□□□ -0.83
LEMD3-206ENST00000545026 FAM117BQ6P1L5 589 aa9.87□□□□□ -0.83
LEMD3-206ENST00000545026 GATAD2BQ8WXI9 593 aa9.87□□□□□ -0.83
LEMD3-206ENST00000545026 GAL3ST3Q96A11 431 aa9.87□□□□□ -0.83
LEMD3-206ENST00000545026 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.87□□□□□ -0.83
LEMD3-206ENST00000545026 OSGEPQ9NPF4 335 aa9.87□□□□□ -0.83
LEMD3-206ENST00000545026 EFR3BQ9Y2G0 817 aa9.87□□□□□ -0.83
LEMD3-206ENST00000545026 ROBO2Q9HCK4 1378 aa9.87□□□□□ -0.83
LEMD3-206ENST00000545026 GSTP1P09211 210 aaKnown RBP9.86□□□□□ -0.83
LEMD3-206ENST00000545026 NID1P14543 1247 aa9.86□□□□□ -0.83
LEMD3-206ENST00000545026 LMNB1P20700 586 aa9.86□□□□□ -0.83
LEMD3-206ENST00000545026 ARL4DP49703 201 aa9.86□□□□□ -0.83
LEMD3-206ENST00000545026 APOBRQ0VD83 1088 aa9.86□□□□□ -0.83
LEMD3-206ENST00000545026 SCARA3Q6AZY7 606 aa9.86□□□□□ -0.83
LEMD3-206ENST00000545026 MPRIPQ6WCQ1 1025 aa9.86□□□□□ -0.83
LEMD3-206ENST00000545026 FBXO27Q8NI29 283 aa9.86□□□□□ -0.83
LEMD3-206ENST00000545026 WHAMMQ8TF30 809 aa9.86□□□□□ -0.83
LEMD3-206ENST00000545026 JARID2Q92833 1246 aaPredicted RBP9.86□□□□□ -0.83
LEMD3-206ENST00000545026 LRRC3Q9BY71 257 aa9.86□□□□□ -0.83
LEMD3-206ENST00000545026 CACNA2D2Q9NY47 1150 aa9.86□□□□□ -0.83
LEMD3-206ENST00000545026 EIF4EBP3O60516 100 aaPredicted RBP9.85□□□□□ -0.83
LEMD3-206ENST00000545026 HOXB4P17483 251 aaPredicted RBP9.85□□□□□ -0.83
LEMD3-206ENST00000545026 GTF2F1P35269 517 aaKnown RBP eCLIP9.85□□□□□ -0.83
LEMD3-206ENST00000545026 SOX9P48436 509 aa9.85□□□□□ -0.83
LEMD3-206ENST00000545026 NASPP49321 788 aaPredicted RBP9.85□□□□□ -0.83
LEMD3-206ENST00000545026 PTPN11Q06124 597 aaPredicted RBP9.85□□□□□ -0.83
LEMD3-206ENST00000545026 SETDB1Q15047 1291 aa9.85□□□□□ -0.83
LEMD3-206ENST00000545026 SLITRK4Q8IW52 837 aa9.85□□□□□ -0.83
LEMD3-206ENST00000545026 KLHDC7BQ96G42 594 aa9.85□□□□□ -0.83
LEMD3-206ENST00000545026 CARD10Q9BWT7 1032 aa9.85□□□□□ -0.83
LEMD3-206ENST00000545026 CILPO75339 1184 aa9.84□□□□□ -0.83
LEMD3-206ENST00000545026 WFS1O76024 890 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms