RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 A0A1W2PQ27 194 aa20.71■□□□□ 0.91
SCARB1-208ENST00000544327 A0A1W2PQ64 194 aa20.71■□□□□ 0.91
SCARB1-208ENST00000544327 A0A1W2PQD8 194 aa20.71■□□□□ 0.91
SCARB1-208ENST00000544327 GOLGA6L6A8MZA4 724 aa20.71■□□□□ 0.91
SCARB1-208ENST00000544327 SH2B2O14492 632 aaPredicted RBP20.71■□□□□ 0.91
SCARB1-208ENST00000544327 CRKLP46109 303 aaKnown RBP20.71■□□□□ 0.91
SCARB1-208ENST00000544327 DDB1Q16531 1140 aa20.71■□□□□ 0.91
SCARB1-208ENST00000544327 CCDC73Q6ZRK6 1079 aa20.71■□□□□ 0.91
SCARB1-208ENST00000544327 LUZP1Q86V48 1076 aa20.71■□□□□ 0.91
SCARB1-208ENST00000544327 SPATA5Q8NB90 893 aa20.71■□□□□ 0.91
SCARB1-208ENST00000544327 FTOQ9C0B1 505 aaKnown RBP eCLIP20.71■□□□□ 0.91
SCARB1-208ENST00000544327 GOLPH3LQ9H4A5 285 aa20.71■□□□□ 0.91
SCARB1-208ENST00000544327 ORC3Q9UBD5 711 aaPredicted RBP20.71■□□□□ 0.91
SCARB1-208ENST00000544327 BCORQ6W2J9 1755 aa20.7■□□□□ 0.9
SCARB1-208ENST00000544327 YEATS4O95619 227 aa20.7■□□□□ 0.9
SCARB1-208ENST00000544327 CEBPZQ03701 1054 aaKnown RBP20.7■□□□□ 0.9
SCARB1-208ENST00000544327 FAM160A1Q05DH4 1040 aa20.7■□□□□ 0.9
SCARB1-208ENST00000544327 TMEM87BQ96K49 555 aa20.7■□□□□ 0.9
SCARB1-208ENST00000544327 SPTLC3Q9NUV7 552 aa20.7■□□□□ 0.9
SCARB1-208ENST00000544327 KAT6BQ8WYB5 2073 aa20.7■□□□□ 0.9
SCARB1-208ENST00000544327 GUCY1B3Q02153 619 aa20.69■□□□□ 0.9
SCARB1-208ENST00000544327 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.69■□□□□ 0.9
SCARB1-208ENST00000544327 POLR3EQ9NVU0 708 aa20.69■□□□□ 0.9
SCARB1-208ENST00000544327 LOC102724428A0A0B4J2F2 783 aa20.69■□□□□ 0.9
SCARB1-208ENST00000544327 PATL2C9JE40 543 aaKnown RBP20.69■□□□□ 0.9
SCARB1-208ENST00000544327 CPLX1O14810 134 aa20.69■□□□□ 0.9
SCARB1-208ENST00000544327 SIK1P57059 783 aa20.69■□□□□ 0.9
SCARB1-208ENST00000544327 MAP3K12Q12852 859 aa20.69■□□□□ 0.9
SCARB1-208ENST00000544327 CCDC152Q4G0S7 254 aa20.69■□□□□ 0.9
SCARB1-208ENST00000544327 ADALQ6DHV7 355 aa20.69■□□□□ 0.9
SCARB1-208ENST00000544327 TTC12Q9H892 705 aaPredicted RBP20.69■□□□□ 0.9
SCARB1-208ENST00000544327 R3HCC1Q9Y3T6 440 aaKnown RBP20.69■□□□□ 0.9
SCARB1-208ENST00000544327 COL5A3P25940 1745 aaPredicted RBP20.68■□□□□ 0.9
SCARB1-208ENST00000544327 NTSR2O95665 410 aa20.68■□□□□ 0.9
SCARB1-208ENST00000544327 ATP6V1AP38606 617 aa20.68■□□□□ 0.9
SCARB1-208ENST00000544327 CYB5R4Q7L1T6 521 aa20.68■□□□□ 0.9
SCARB1-208ENST00000544327 LINC00301Q8NCQ3 95 aa20.68■□□□□ 0.9
SCARB1-208ENST00000544327 AIDAQ96BJ3 306 aa20.68■□□□□ 0.9
SCARB1-208ENST00000544327 MPHOSPH8Q99549 860 aa20.68■□□□□ 0.9
SCARB1-208ENST00000544327 MYH14Q7Z406 1995 aaKnown RBP20.67■□□□□ 0.9
SCARB1-208ENST00000544327 CDKL5O76039 1030 aa20.67■□□□□ 0.9
SCARB1-208ENST00000544327 ZNF165P49910 485 aa20.67■□□□□ 0.9
SCARB1-208ENST00000544327 PLCB2Q00722 1185 aa20.67■□□□□ 0.9
SCARB1-208ENST00000544327 RASGRF1Q13972 1273 aa20.67■□□□□ 0.9
SCARB1-208ENST00000544327 STX1AQ16623 288 aa20.67■□□□□ 0.9
SCARB1-208ENST00000544327 SGMS1Q86VZ5 419 aa20.67■□□□□ 0.9
SCARB1-208ENST00000544327 PLA2G4DQ86XP0 818 aa20.67■□□□□ 0.9
SCARB1-208ENST00000544327 MARCH10Q8NA82 808 aaPredicted RBP20.67■□□□□ 0.9
SCARB1-208ENST00000544327 HELBQ8NG08 1087 aaPredicted RBP20.67■□□□□ 0.9
SCARB1-208ENST00000544327 KCNG4Q8TDN1 519 aa20.67■□□□□ 0.9
SCARB1-208ENST00000544327 ZNF830Q96NB3 372 aaPredicted RBP20.67■□□□□ 0.9
SCARB1-208ENST00000544327 CHD4Q14839 1912 aa20.67■□□□□ 0.9
SCARB1-208ENST00000544327 KINO60870 393 aaKnown RBP20.67■□□□□ 0.9
SCARB1-208ENST00000544327 ME1P48163 572 aa20.67■□□□□ 0.9
SCARB1-208ENST00000544327 ITPK1Q13572 414 aa20.67■□□□□ 0.9
SCARB1-208ENST00000544327 NID2Q14112 1375 aa20.67■□□□□ 0.9
SCARB1-208ENST00000544327 NOLC1Q14978 699 aaKnown RBP eCLIP20.67■□□□□ 0.9
SCARB1-208ENST00000544327 BCL9LQ86UU0 1499 aa20.67■□□□□ 0.9
SCARB1-208ENST00000544327 FSIP1Q8NA03 581 aa20.67■□□□□ 0.9
SCARB1-208ENST00000544327 MRPS27Q92552 414 aaKnown RBP20.67■□□□□ 0.9
SCARB1-208ENST00000544327 DNAJC25Q9H1X3 360 aa20.67■□□□□ 0.9
SCARB1-208ENST00000544327 PCDHA7Q9UN72 937 aa20.67■□□□□ 0.9
SCARB1-208ENST00000544327 SPATA31A5Q5VU36 1347 aa20.66■□□□□ 0.9
SCARB1-208ENST00000544327 PNPLA7Q6ZV29 1317 aa20.66■□□□□ 0.9
SCARB1-208ENST00000544327 SPATA31A7Q8IWB4 1347 aa20.66■□□□□ 0.9
SCARB1-208ENST00000544327 APPP05067 770 aa20.66■□□□□ 0.9
SCARB1-208ENST00000544327 MYSM1Q5VVJ2 828 aa20.66■□□□□ 0.9
SCARB1-208ENST00000544327 BARGINQ6ZT62 677 aa20.66■□□□□ 0.9
SCARB1-208ENST00000544327 FMR1NBQ8N0W7 255 aaPredicted RBP20.66■□□□□ 0.9
SCARB1-208ENST00000544327 IGDCC4Q8TDY8 1250 aa20.66■□□□□ 0.9
SCARB1-208ENST00000544327 IGHMBP2P38935 993 aaKnown RBP20.65■□□□□ 0.9
SCARB1-208ENST00000544327 ZNF75DP51815 510 aa20.65■□□□□ 0.9
SCARB1-208ENST00000544327 KIF23Q02241 960 aaPredicted RBP20.65■□□□□ 0.9
SCARB1-208ENST00000544327 IQCB1Q15051 598 aa20.65■□□□□ 0.9
SCARB1-208ENST00000544327 KCNF1Q9H3M0 494 aa20.65■□□□□ 0.9
SCARB1-208ENST00000544327 EPB41L4AQ9HCS5 686 aaPredicted RBP20.65■□□□□ 0.9
SCARB1-208ENST00000544327 SEC31BQ9NQW1 1179 aa20.65■□□□□ 0.9
SCARB1-208ENST00000544327 ECM29Q5VYK3 1845 aa20.65■□□□□ 0.9
SCARB1-208ENST00000544327 NEDD4P46934 1319 aa20.65■□□□□ 0.9
SCARB1-208ENST00000544327 PPFIA3O75145 1194 aa20.64■□□□□ 0.9
SCARB1-208ENST00000544327 GNAT2P19087 354 aa20.64■□□□□ 0.9
SCARB1-208ENST00000544327 CDC25BP30305 580 aa20.64■□□□□ 0.9
SCARB1-208ENST00000544327 LIFRP42702 1097 aa20.64■□□□□ 0.9
SCARB1-208ENST00000544327 METAP2P50579 478 aaKnown RBP eCLIP20.64■□□□□ 0.9
SCARB1-208ENST00000544327 APOA5Q6Q788 366 aa20.64■□□□□ 0.9
SCARB1-208ENST00000544327 SARM1Q6SZW1 724 aa20.64■□□□□ 0.9
SCARB1-208ENST00000544327 IFNL3Q8IZI9 196 aa20.64■□□□□ 0.9
SCARB1-208ENST00000544327 MAGEB6Q8N7X4 407 aa20.64■□□□□ 0.9
SCARB1-208ENST00000544327 SMARCC1Q92922 1105 aaPredicted RBP20.64■□□□□ 0.9
SCARB1-208ENST00000544327 DENND2AQ9ULE3 1009 aa20.64■□□□□ 0.9
SCARB1-208ENST00000544327 A0A1B0GUL6 1792 aa20.64■□□□□ 0.89
SCARB1-208ENST00000544327 OTUD7BQ6GQQ9 843 aa20.64■□□□□ 0.89
SCARB1-208ENST00000544327 CPLX2Q6PUV4 134 aaKnown RBP20.64■□□□□ 0.89
SCARB1-208ENST00000544327 MPNDQ8N594 471 aa20.64■□□□□ 0.89
SCARB1-208ENST00000544327 NKX2-3Q8TAU0 364 aa20.64■□□□□ 0.89
SCARB1-208ENST00000544327 KIAA1524Q8TCG1 905 aa20.64■□□□□ 0.89
SCARB1-208ENST00000544327 CNNM2Q9H8M5 875 aa20.64■□□□□ 0.89
SCARB1-208ENST00000544327 LY9Q9HBG7 655 aa20.64■□□□□ 0.89
SCARB1-208ENST00000544327 B4E1Z4 1266 aa20.63■□□□□ 0.89
SCARB1-208ENST00000544327 MBD4O95243 580 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms