RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 GCC1Q96CN9 775 aa20.54■□□□□ 0.88
UBC-208ENST00000540700 CDCA5Q96FF9 252 aa20.54■□□□□ 0.88
UBC-208ENST00000540700 LRRCC1Q9C099 1032 aa20.54■□□□□ 0.88
UBC-208ENST00000540700 AKAP2Q9Y2D5 859 aa20.54■□□□□ 0.88
UBC-208ENST00000540700 COL1A1P02452 1464 aaPredicted RBP20.54■□□□□ 0.88
UBC-208ENST00000540700 PHKA1P46020 1223 aa20.53■□□□□ 0.88
UBC-208ENST00000540700 PRPF38BQ5VTL8 546 aaKnown RBP20.53■□□□□ 0.88
UBC-208ENST00000540700 B4GALNT3Q6L9W6 998 aa20.53■□□□□ 0.88
UBC-208ENST00000540700 AACSQ86V21 672 aa20.53■□□□□ 0.88
UBC-208ENST00000540700 NEUROD6Q96NK8 337 aa20.53■□□□□ 0.88
UBC-208ENST00000540700 BCL11AQ9H165 835 aa20.53■□□□□ 0.88
UBC-208ENST00000540700 CD209Q9NNX6 404 aa20.53■□□□□ 0.88
UBC-208ENST00000540700 ZNF646O15015 1829 aaPredicted RBP20.53■□□□□ 0.88
UBC-208ENST00000540700 SCN9AQ15858 1988 aa20.52■□□□□ 0.88
UBC-208ENST00000540700 OTUD7AQ8TE49 926 aaPredicted RBP20.52■□□□□ 0.88
UBC-208ENST00000540700 HIBADHP31937 336 aaKnown RBP20.51■□□□□ 0.87
UBC-208ENST00000540700 ANKRD45Q5TZF3 282 aa20.51■□□□□ 0.87
UBC-208ENST00000540700 ERICH6BQ5W0A0 696 aa20.51■□□□□ 0.87
UBC-208ENST00000540700 CCDC102BQ68D86 513 aa20.51■□□□□ 0.87
UBC-208ENST00000540700 COA1Q9GZY4 146 aa20.51■□□□□ 0.87
UBC-208ENST00000540700 IQSEC3Q9UPP2 1182 aaPredicted RBP20.51■□□□□ 0.87
UBC-208ENST00000540700 HPS5Q9UPZ3 1129 aa20.51■□□□□ 0.87
UBC-208ENST00000540700 G3V3G9 751 aa20.5■□□□□ 0.87
UBC-208ENST00000540700 IL1R1P14778 569 aa20.5■□□□□ 0.87
UBC-208ENST00000540700 DCAF8Q5TAQ9 597 aa20.5■□□□□ 0.87
UBC-208ENST00000540700 ANGEL2Q5VTE6 544 aaKnown RBP20.5■□□□□ 0.87
UBC-208ENST00000540700 RASAL3Q86YV0 1011 aa20.5■□□□□ 0.87
UBC-208ENST00000540700 CLASRPQ8N2M8 674 aaKnown RBP20.5■□□□□ 0.87
UBC-208ENST00000540700 TDRD7Q8NHU6 1098 aaKnown RBP20.5■□□□□ 0.87
UBC-208ENST00000540700 POLR2AP24928 1970 aaKnown RBP20.5■□□□□ 0.87
UBC-208ENST00000540700 VIL1P09327 827 aaKnown RBP20.49■□□□□ 0.87
UBC-208ENST00000540700 NUCB1Q02818 461 aa20.49■□□□□ 0.87
UBC-208ENST00000540700 SCARF1Q14162 830 aa20.49■□□□□ 0.87
UBC-208ENST00000540700 ZNF804AQ7Z570 1209 aa20.49■□□□□ 0.87
UBC-208ENST00000540700 HDAC9Q9UKV0 1011 aa20.49■□□□□ 0.87
UBC-208ENST00000540700 JAG2Q9Y219 1238 aa20.49■□□□□ 0.87
UBC-208ENST00000540700 SALL3Q9BXA9 1300 aa20.49■□□□□ 0.87
UBC-208ENST00000540700 MXD3Q9BW11 206 aa20.48■□□□□ 0.87
UBC-208ENST00000540700 LNPKQ9C0E8 428 aa20.48■□□□□ 0.87
UBC-208ENST00000540700 PPP4R2Q9NY27 417 aa20.48■□□□□ 0.87
UBC-208ENST00000540700 SCAF8Q9UPN6 1271 aaKnown RBP20.48■□□□□ 0.87
UBC-208ENST00000540700 TBC1D8O95759 1140 aa20.47■□□□□ 0.87
UBC-208ENST00000540700 CAVIN4Q5BKX8 364 aa20.47■□□□□ 0.87
UBC-208ENST00000540700 TSHZ3Q63HK5 1081 aa20.47■□□□□ 0.87
UBC-208ENST00000540700 PI16Q6UXB8 463 aa20.47■□□□□ 0.87
UBC-208ENST00000540700 MOB2Q70IA6 237 aa20.47■□□□□ 0.87
UBC-208ENST00000540700 PODNQ7Z5L7 613 aa20.47■□□□□ 0.87
UBC-208ENST00000540700 CCDC136Q96JN2 1154 aa20.47■□□□□ 0.87
UBC-208ENST00000540700 PDE4AP27815 886 aa20.46■□□□□ 0.87
UBC-208ENST00000540700 ARID4AP29374 1257 aaPredicted RBP20.46■□□□□ 0.87
UBC-208ENST00000540700 RASGRF1Q13972 1273 aa20.46■□□□□ 0.87
UBC-208ENST00000540700 CHD1LQ86WJ1 897 aa20.46■□□□□ 0.87
UBC-208ENST00000540700 SKAP1Q86WV1 359 aa20.46■□□□□ 0.87
UBC-208ENST00000540700 REM2Q8IYK8 340 aaPredicted RBP20.46■□□□□ 0.87
UBC-208ENST00000540700 IFIT2P09913 472 aaKnown RBP20.45■□□□□ 0.86
UBC-208ENST00000540700 MCAMP43121 646 aa20.45■□□□□ 0.86
UBC-208ENST00000540700 VPS37DQ86XT2 251 aa20.45■□□□□ 0.86
UBC-208ENST00000540700 ZNF296Q8WUU4 475 aaPredicted RBP20.45■□□□□ 0.86
UBC-208ENST00000540700 PSME4Q14997 1843 aa20.44■□□□□ 0.86
UBC-208ENST00000540700 UBE2Q2LH0YL09 131 aa20.44■□□□□ 0.86
UBC-208ENST00000540700 ZNF280AP59817 542 aaPredicted RBP20.44■□□□□ 0.86
UBC-208ENST00000540700 GTF2IP78347 998 aa20.44■□□□□ 0.86
UBC-208ENST00000540700 GRIK5Q16478 980 aa20.44■□□□□ 0.86
UBC-208ENST00000540700 DACT2Q5SW24 774 aa20.44■□□□□ 0.86
UBC-208ENST00000540700 RSBN1LQ6PCB5 846 aaPredicted RBP20.44■□□□□ 0.86
UBC-208ENST00000540700 CENPQQ7L2Z9 268 aaPredicted RBP20.44■□□□□ 0.86
UBC-208ENST00000540700 CERS5Q8N5B7 392 aa20.44■□□□□ 0.86
UBC-208ENST00000540700 NDUFB9Q9Y6M9 179 aa20.44■□□□□ 0.86
UBC-208ENST00000540700 AKAP11Q9UKA4 1901 aa20.44■□□□□ 0.86
UBC-208ENST00000540700 ZBTB22O15209 634 aa20.43■□□□□ 0.86
UBC-208ENST00000540700 CHAF1AQ13111 956 aaPredicted RBP20.43■□□□□ 0.86
UBC-208ENST00000540700 PKN2Q16513 984 aaKnown RBP20.43■□□□□ 0.86
UBC-208ENST00000540700 GORABQ5T7V8 394 aa20.43■□□□□ 0.86
UBC-208ENST00000540700 PRAMEF18Q5VWM3 479 aa20.43■□□□□ 0.86
UBC-208ENST00000540700 HMG20BQ9P0W2 317 aa20.43■□□□□ 0.86
UBC-208ENST00000540700 FAM205AQ6ZU69 1335 aa20.43■□□□□ 0.86
UBC-208ENST00000540700 USP17L3A6NCW0 530 aa20.42■□□□□ 0.86
UBC-208ENST00000540700 USP17L4A6NCW7 530 aa20.42■□□□□ 0.86
UBC-208ENST00000540700 FKBP1BP68106 108 aa20.42■□□□□ 0.86
UBC-208ENST00000540700 MKRN3Q13064 507 aaKnown RBP20.42■□□□□ 0.86
UBC-208ENST00000540700 TTLL12Q14166 644 aaPredicted RBP20.42■□□□□ 0.86
UBC-208ENST00000540700 TTC39AQ5SRH9 613 aa20.42■□□□□ 0.86
UBC-208ENST00000540700 TTLL5Q6EMB2 1281 aa20.42■□□□□ 0.86
UBC-208ENST00000540700 USP17L1Q7RTZ2 530 aa20.42■□□□□ 0.86
UBC-208ENST00000540700 FBXW7Q969H0 707 aa20.42■□□□□ 0.86
UBC-208ENST00000540700 ZNF512BQ96KM6 892 aaPredicted RBP20.42■□□□□ 0.86
UBC-208ENST00000540700 MYOZ2Q9NPC6 264 aa20.42■□□□□ 0.86
UBC-208ENST00000540700 USP17L8P0C7I0 530 aa20.41■□□□□ 0.86
UBC-208ENST00000540700 CCDC158Q5M9N0 1113 aa20.41■□□□□ 0.86
UBC-208ENST00000540700 STRIP1Q5VSL9 837 aa20.41■□□□□ 0.86
UBC-208ENST00000540700 AGBL3Q8NEM8 1001 aa20.41■□□□□ 0.86
UBC-208ENST00000540700 SNRKQ9NRH2 765 aa20.41■□□□□ 0.86
UBC-208ENST00000540700 PI4K2BQ8TCG2 481 aa20.4■□□□□ 0.86
UBC-208ENST00000540700 GMLQ99445 158 aa20.4■□□□□ 0.86
UBC-208ENST00000540700 UQCRFS1P1P0C7P4 283 aa20.39■□□□□ 0.85
UBC-208ENST00000540700 MX1P20591 662 aa20.39■□□□□ 0.85
UBC-208ENST00000540700 ZAP70P43403 619 aa20.39■□□□□ 0.85
UBC-208ENST00000540700 SPATA5Q8NB90 893 aa20.39■□□□□ 0.85
UBC-208ENST00000540700 EDC3Q96F86 508 aaKnown RBP20.39■□□□□ 0.85
UBC-208ENST00000540700 ECHDC1Q9NTX5 307 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms