RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 GNAT2P19087 354 aa17.52■□□□□ 0.4
TSFM-207ENST00000540550 NFIXQ14938 502 aa17.52■□□□□ 0.4
TSFM-207ENST00000540550 CDC37L1Q7L3B6 337 aa17.52■□□□□ 0.4
TSFM-207ENST00000540550 SYAP1Q96A49 352 aaPredicted RBP17.52■□□□□ 0.4
TSFM-207ENST00000540550 ARMT1Q9H993 441 aa17.52■□□□□ 0.4
TSFM-207ENST00000540550 DENND2AQ9ULE3 1009 aa17.52■□□□□ 0.4
TSFM-207ENST00000540550 PATL2C9JE40 543 aaKnown RBP17.51■□□□□ 0.39
TSFM-207ENST00000540550 NACAP1Q9BZK3 213 aa17.51■□□□□ 0.39
TSFM-207ENST00000540550 NAPBQ9H115 298 aa17.51■□□□□ 0.39
TSFM-207ENST00000540550 RAI14Q9P0K7 980 aa17.51■□□□□ 0.39
TSFM-207ENST00000540550 ABCF2Q9UG63 623 aa17.51■□□□□ 0.39
TSFM-207ENST00000540550 SEMA3EO15041 775 aa17.51■□□□□ 0.39
TSFM-207ENST00000540550 XRCC6P12956 609 aaKnown RBP eCLIP17.51■□□□□ 0.39
TSFM-207ENST00000540550 ZNF445P59923 1031 aa17.51■□□□□ 0.39
TSFM-207ENST00000540550 HMGN5P82970 282 aaKnown RBP17.51■□□□□ 0.39
TSFM-207ENST00000540550 ZNF772Q68DY9 489 aaPredicted RBP17.51■□□□□ 0.39
TSFM-207ENST00000540550 SMARCC2Q8TAQ2 1214 aa17.51■□□□□ 0.39
TSFM-207ENST00000540550 DDX11Q96FC9 970 aa17.51■□□□□ 0.39
TSFM-207ENST00000540550 RBM27Q9P2N5 1060 aaKnown RBP17.51■□□□□ 0.39
TSFM-207ENST00000540550 PNPLA7Q6ZV29 1317 aa17.5■□□□□ 0.39
TSFM-207ENST00000540550 H3BQV1 296 aa17.5■□□□□ 0.39
TSFM-207ENST00000540550 FIBPO43427 364 aa17.5■□□□□ 0.39
TSFM-207ENST00000540550 TRIM37O94972 964 aa17.5■□□□□ 0.39
TSFM-207ENST00000540550 PDIA3P30101 505 aaKnown RBP17.5■□□□□ 0.39
TSFM-207ENST00000540550 CCT2P78371 535 aaKnown RBP17.5■□□□□ 0.39
TSFM-207ENST00000540550 IFFO2Q5TF58 517 aa17.5■□□□□ 0.39
TSFM-207ENST00000540550 TBC1D10CQ8IV04 446 aa17.5■□□□□ 0.39
TSFM-207ENST00000540550 IFNL3Q8IZI9 196 aa17.5■□□□□ 0.39
TSFM-207ENST00000540550 FAM84BQ96KN1 310 aaPredicted RBP17.5■□□□□ 0.39
TSFM-207ENST00000540550 COL1A1P02452 1464 aaPredicted RBP17.5■□□□□ 0.39
TSFM-207ENST00000540550 CYP7A1P22680 504 aa17.49■□□□□ 0.39
TSFM-207ENST00000540550 HMGB2P26583 209 aaKnown RBP17.49■□□□□ 0.39
TSFM-207ENST00000540550 DNM1Q05193 864 aaKnown RBP17.49■□□□□ 0.39
TSFM-207ENST00000540550 GAS2L3Q86XJ1 694 aa17.49■□□□□ 0.39
TSFM-207ENST00000540550 NSUN7Q8NE18 718 aaKnown RBP17.49■□□□□ 0.39
TSFM-207ENST00000540550 NBPF3Q9H094 633 aa17.49■□□□□ 0.39
TSFM-207ENST00000540550 BRPF3Q9ULD4 1205 aa17.49■□□□□ 0.39
TSFM-207ENST00000540550 NSFL1CQ9UNZ2 370 aaKnown RBP17.49■□□□□ 0.39
TSFM-207ENST00000540550 SLC4A4Q9Y6R1 1079 aa17.49■□□□□ 0.39
TSFM-207ENST00000540550 TIAM2Q8IVF5 1701 aa17.49■□□□□ 0.39
TSFM-207ENST00000540550 PTPDC1A2A3K4 754 aa17.49■□□□□ 0.39
TSFM-207ENST00000540550 GADD45BO75293 160 aaPredicted RBP17.49■□□□□ 0.39
TSFM-207ENST00000540550 EVCP57679 992 aa17.49■□□□□ 0.39
TSFM-207ENST00000540550 ANTXR2P58335 489 aa17.49■□□□□ 0.39
TSFM-207ENST00000540550 RBM6P78332 1123 aaKnown RBP17.49■□□□□ 0.39
TSFM-207ENST00000540550 FERMT3Q86UX7 667 aa17.49■□□□□ 0.39
TSFM-207ENST00000540550 LCORLQ8N3X6 602 aa17.49■□□□□ 0.39
TSFM-207ENST00000540550 KLF18A0A0U1RQI7 1052 aa17.48■□□□□ 0.39
TSFM-207ENST00000540550 WTIPA6NIX2 430 aaPredicted RBP17.48■□□□□ 0.39
TSFM-207ENST00000540550 TM4SF1P30408 202 aa17.48■□□□□ 0.39
TSFM-207ENST00000540550 TDO2P48775 406 aa17.48■□□□□ 0.39
TSFM-207ENST00000540550 UBE2HP62256 183 aa17.48■□□□□ 0.39
TSFM-207ENST00000540550 KRT85P78386 507 aa17.48■□□□□ 0.39
TSFM-207ENST00000540550 FBXO33Q7Z6M2 555 aa17.48■□□□□ 0.39
TSFM-207ENST00000540550 NCOA5Q9HCD5 579 aaKnown RBP17.48■□□□□ 0.39
TSFM-207ENST00000540550 EPB41L4AQ9HCS5 686 aaPredicted RBP17.48■□□□□ 0.39
TSFM-207ENST00000540550 TMEM63CQ9P1W3 806 aa17.48■□□□□ 0.39
TSFM-207ENST00000540550 GOLGA8BA8MQT2 603 aa17.47■□□□□ 0.39
TSFM-207ENST00000540550 HIBADHP31937 336 aaKnown RBP17.47■□□□□ 0.39
TSFM-207ENST00000540550 ST5P78524 1137 aa17.47■□□□□ 0.39
TSFM-207ENST00000540550 GRAPQ13588 217 aa17.47■□□□□ 0.39
TSFM-207ENST00000540550 MIGA1Q8NAN2 632 aa17.47■□□□□ 0.39
TSFM-207ENST00000540550 GRAPLQ8TC17 118 aaPredicted RBP17.47■□□□□ 0.39
TSFM-207ENST00000540550 GPHNQ9NQX3 736 aaPredicted RBP17.47■□□□□ 0.39
TSFM-207ENST00000540550 CACNA1SQ13698 1873 aa17.47■□□□□ 0.39
TSFM-207ENST00000540550 MAST2Q6P0Q8 1798 aa17.47■□□□□ 0.39
TSFM-207ENST00000540550 MYH15Q9Y2K3 1946 aa17.47■□□□□ 0.39
TSFM-207ENST00000540550 CCDC88AQ3V6T2 1871 aa17.47■□□□□ 0.39
TSFM-207ENST00000540550 MAGEB6P1A0A0J9YX57 407 aa17.47■□□□□ 0.39
TSFM-207ENST00000540550 GSG1L2A8MUP6 293 aa17.47■□□□□ 0.39
TSFM-207ENST00000540550 DHX16O60231 1041 aaKnown RBP17.47■□□□□ 0.39
TSFM-207ENST00000540550 EP400Q96L91 3159 aa17.46■□□□□ 0.39
TSFM-207ENST00000540550 PDS5AQ29RF7 1337 aaKnown RBP17.46■□□□□ 0.39
TSFM-207ENST00000540550 CTDNEP1O95476 244 aa17.46■□□□□ 0.39
TSFM-207ENST00000540550 GYS1P13807 737 aa17.46■□□□□ 0.39
TSFM-207ENST00000540550 KLRK1P26718 216 aa17.46■□□□□ 0.39
TSFM-207ENST00000540550 PRR5LQ6MZQ0 368 aa17.46■□□□□ 0.39
TSFM-207ENST00000540550 RPGRQ92834 1020 aaKnown RBP17.46■□□□□ 0.39
TSFM-207ENST00000540550 CNNM2Q9H8M5 875 aa17.46■□□□□ 0.39
TSFM-207ENST00000540550 TFCP2L1Q9NZI6 479 aa17.46■□□□□ 0.39
TSFM-207ENST00000540550 B4E1Z4 1266 aa17.45■□□□□ 0.38
TSFM-207ENST00000540550 PRKAB2O43741 272 aa17.45■□□□□ 0.38
TSFM-207ENST00000540550 NAA16Q6N069 864 aaPredicted RBP17.45■□□□□ 0.38
TSFM-207ENST00000540550 ANGEL1Q9UNK9 670 aaKnown RBP17.45■□□□□ 0.38
TSFM-207ENST00000540550 NEDD4P46934 1319 aa17.45■□□□□ 0.38
TSFM-207ENST00000540550 CTDSPL2Q05D32 466 aa17.45■□□□□ 0.38
TSFM-207ENST00000540550 TMEM87BQ96K49 555 aa17.45■□□□□ 0.38
TSFM-207ENST00000540550 KRT23Q9C075 422 aa17.45■□□□□ 0.38
TSFM-207ENST00000540550 ZSCAN16Q9H4T2 348 aaPredicted RBP17.45■□□□□ 0.38
TSFM-207ENST00000540550 ANKIB1Q9P2G1 1089 aa17.45■□□□□ 0.38
TSFM-207ENST00000540550 SYCE3A1L190 88 aa17.44■□□□□ 0.38
TSFM-207ENST00000540550 SERPINB2P05120 415 aa17.44■□□□□ 0.38
TSFM-207ENST00000540550 AKNAD1Q5T1N1 836 aa17.44■□□□□ 0.38
TSFM-207ENST00000540550 MFSD6Q6ZSS7 791 aa17.44■□□□□ 0.38
TSFM-207ENST00000540550 CYB5R4Q7L1T6 521 aa17.44■□□□□ 0.38
TSFM-207ENST00000540550 SALL1Q9NSC2 1324 aa17.44■□□□□ 0.38
TSFM-207ENST00000540550 SH2B2O14492 632 aaPredicted RBP17.43■□□□□ 0.38
TSFM-207ENST00000540550 CPLX1O14810 134 aa17.43■□□□□ 0.38
TSFM-207ENST00000540550 TPRNQ4KMQ1 711 aa17.43■□□□□ 0.38
TSFM-207ENST00000540550 ADGRA1Q86SQ6 560 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms