RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 MAP3K2Q9Y2U5 619 aa14.72□□□□□ -0.05
DDX55-206ENST00000539934 PPME1Q9Y570 386 aa14.72□□□□□ -0.05
DDX55-206ENST00000539934 PES1O00541 588 aaKnown RBP14.72□□□□□ -0.05
DDX55-206ENST00000539934 TRAK2O60296 914 aa14.72□□□□□ -0.05
DDX55-206ENST00000539934 REC8O95072 547 aa14.72□□□□□ -0.05
DDX55-206ENST00000539934 SERPINB2P05120 415 aa14.72□□□□□ -0.05
DDX55-206ENST00000539934 KSR2Q6VAB6 950 aa14.72□□□□□ -0.05
DDX55-206ENST00000539934 PIAS4Q8N2W9 510 aaPredicted RBP14.72□□□□□ -0.05
DDX55-206ENST00000539934 TTLL6Q8N841 843 aa14.72□□□□□ -0.05
DDX55-206ENST00000539934 CWC25Q9NXE8 425 aaPredicted RBP14.72□□□□□ -0.05
DDX55-206ENST00000539934 FOXN1O15353 648 aa14.71□□□□□ -0.05
DDX55-206ENST00000539934 C21orf2O43822 256 aa14.71□□□□□ -0.05
DDX55-206ENST00000539934 U2AF2P26368 475 aaKnown RBP eCLIP14.71□□□□□ -0.05
DDX55-206ENST00000539934 AIMP1Q12904 312 aaKnown RBP14.71□□□□□ -0.05
DDX55-206ENST00000539934 LONRF3Q496Y0 759 aa14.71□□□□□ -0.05
DDX55-206ENST00000539934 BMP2KLQ5H9B9 411 aa14.71□□□□□ -0.05
DDX55-206ENST00000539934 TACO1Q9BSH4 297 aaKnown RBP14.71□□□□□ -0.05
DDX55-206ENST00000539934 ZBTB1Q9Y2K1 713 aa14.71□□□□□ -0.05
DDX55-206ENST00000539934 AFDNP55196 1824 aaKnown RBP14.71□□□□□ -0.05
DDX55-206ENST00000539934 LAMB4A4D0S4 1761 aa14.71□□□□□ -0.06
DDX55-206ENST00000539934 MARCH6O60337 910 aa14.7□□□□□ -0.06
DDX55-206ENST00000539934 HNRNPH2P55795 449 aaKnown RBP14.7□□□□□ -0.06
DDX55-206ENST00000539934 ATP8B2P98198 1209 aa14.7□□□□□ -0.06
DDX55-206ENST00000539934 ADCY2Q08462 1091 aa14.7□□□□□ -0.06
DDX55-206ENST00000539934 BCL2L12Q9HB09 334 aa14.7□□□□□ -0.06
DDX55-206ENST00000539934 IRAK4Q9NWZ3 460 aa14.7□□□□□ -0.06
DDX55-206ENST00000539934 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.7□□□□□ -0.06
DDX55-206ENST00000539934 MORC2Q9Y6X9 1032 aaPredicted RBP14.7□□□□□ -0.06
DDX55-206ENST00000539934 TJP1Q07157 1748 aa14.7□□□□□ -0.06
DDX55-206ENST00000539934 A0A1B0GUL7 405 aa14.7□□□□□ -0.06
DDX55-206ENST00000539934 DDNO94850 711 aaPredicted RBP14.7□□□□□ -0.06
DDX55-206ENST00000539934 MYL6BP14649 208 aa14.7□□□□□ -0.06
DDX55-206ENST00000539934 MAP2K2P36507 400 aa14.7□□□□□ -0.06
DDX55-206ENST00000539934 ERFEQ4G0M1 354 aa14.7□□□□□ -0.06
DDX55-206ENST00000539934 DRC1Q96MC2 740 aa14.7□□□□□ -0.06
DDX55-206ENST00000539934 ANTXR1Q9H6X2 564 aa14.7□□□□□ -0.06
DDX55-206ENST00000539934 ZNF330Q9Y3S2 320 aaPredicted RBP14.7□□□□□ -0.06
DDX55-206ENST00000539934 PDIA6Q15084 440 aa14.69□□□□□ -0.06
DDX55-206ENST00000539934 RBM27Q9P2N5 1060 aaKnown RBP14.69□□□□□ -0.06
DDX55-206ENST00000539934 PNMA6EA0A0J9YXQ4 647 aa14.69□□□□□ -0.06
DDX55-206ENST00000539934 SMARCA5O60264 1052 aaPredicted RBP14.69□□□□□ -0.06
DDX55-206ENST00000539934 KINO60870 393 aaKnown RBP14.69□□□□□ -0.06
DDX55-206ENST00000539934 TRAF1Q13077 416 aa14.69□□□□□ -0.06
DDX55-206ENST00000539934 HSP90B2PQ58FF3 399 aa14.69□□□□□ -0.06
DDX55-206ENST00000539934 TRIM74Q86UV6 250 aa14.69□□□□□ -0.06
DDX55-206ENST00000539934 TRIM73Q86UV7 250 aa14.69□□□□□ -0.06
DDX55-206ENST00000539934 USP16Q9Y5T5 823 aa14.69□□□□□ -0.06
DDX55-206ENST00000539934 TIAM2Q8IVF5 1701 aa14.68□□□□□ -0.06
DDX55-206ENST00000539934 ALDH1L1O75891 902 aa14.68□□□□□ -0.06
DDX55-206ENST00000539934 NBPF7P0C2Y1 421 aaPredicted RBP14.68□□□□□ -0.06
DDX55-206ENST00000539934 FAM200BP0CF97 657 aa14.68□□□□□ -0.06
DDX55-206ENST00000539934 DPY19L2Q6NUT2 758 aa14.68□□□□□ -0.06
DDX55-206ENST00000539934 ANKRD20A12PQ8NF67 263 aa14.68□□□□□ -0.06
DDX55-206ENST00000539934 CEP89Q96ST8 783 aa14.68□□□□□ -0.06
DDX55-206ENST00000539934 SLX1AQ9BQ83 275 aa14.68□□□□□ -0.06
DDX55-206ENST00000539934 LZTS2Q9BRK4 669 aa14.68□□□□□ -0.06
DDX55-206ENST00000539934 EXOC6BQ9Y2D4 811 aa14.68□□□□□ -0.06
DDX55-206ENST00000539934 PCDHGA4Q9Y5G9 962 aa14.68□□□□□ -0.06
DDX55-206ENST00000539934 UBR2Q8IWV8 1755 aa14.68□□□□□ -0.06
DDX55-206ENST00000539934 ZNF831Q5JPB2 1677 aa14.68□□□□□ -0.06
DDX55-206ENST00000539934 H0YIN7 160 aa14.68□□□□□ -0.06
DDX55-206ENST00000539934 CYP19A1P11511 503 aaPredicted RBP14.68□□□□□ -0.06
DDX55-206ENST00000539934 CYP2C19P33261 490 aa14.68□□□□□ -0.06
DDX55-206ENST00000539934 MFSD4BQ5TF39 518 aa14.68□□□□□ -0.06
DDX55-206ENST00000539934 RIC3Q7Z5B4 369 aa14.68□□□□□ -0.06
DDX55-206ENST00000539934 PLEKHM2Q8IWE5 1019 aa14.68□□□□□ -0.06
DDX55-206ENST00000539934 C9orf78Q9NZ63 289 aaPredicted RBP14.68□□□□□ -0.06
DDX55-206ENST00000539934 CWC15Q9P013 229 aaKnown RBP14.68□□□□□ -0.06
DDX55-206ENST00000539934 ABCF2Q9UG63 623 aa14.68□□□□□ -0.06
DDX55-206ENST00000539934 DDX41Q9UJV9 622 aaKnown RBP14.68□□□□□ -0.06
DDX55-206ENST00000539934 SUGT1Q9Y2Z0 365 aa14.68□□□□□ -0.06
DDX55-206ENST00000539934 COL15A1P39059 1388 aa14.67□□□□□ -0.06
DDX55-206ENST00000539934 WDR78Q5VTH9 848 aa14.67□□□□□ -0.06
DDX55-206ENST00000539934 OGFOD1Q8N543 542 aa14.67□□□□□ -0.06
DDX55-206ENST00000539934 NARFQ9UHQ1 456 aa14.67□□□□□ -0.06
DDX55-206ENST00000539934 PEX19P40855 299 aa14.66□□□□□ -0.06
DDX55-206ENST00000539934 RASA3Q14644 834 aa14.66□□□□□ -0.06
DDX55-206ENST00000539934 TMCO4Q5TGY1 634 aa14.66□□□□□ -0.06
DDX55-206ENST00000539934 MMTAG2Q9BU76 263 aaKnown RBP14.66□□□□□ -0.06
DDX55-206ENST00000539934 RMI1Q9H9A7 625 aa14.66□□□□□ -0.06
DDX55-206ENST00000539934 TBC1D2BQ9UPU7 963 aa14.66□□□□□ -0.06
DDX55-206ENST00000539934 BMS1Q14692 1282 aaKnown RBP14.66□□□□□ -0.06
DDX55-206ENST00000539934 NOLC1Q14978 699 aaKnown RBP eCLIP14.66□□□□□ -0.06
DDX55-206ENST00000539934 CWF19L2Q2TBE0 894 aaKnown RBP14.66□□□□□ -0.06
DDX55-206ENST00000539934 WWC2Q6AWC2 1192 aa14.66□□□□□ -0.06
DDX55-206ENST00000539934 COPS6Q7L5N1 327 aa14.66□□□□□ -0.06
DDX55-206ENST00000539934 LINS1Q8NG48 757 aa14.66□□□□□ -0.06
DDX55-206ENST00000539934 XAGE3Q8WTP9 111 aa14.66□□□□□ -0.06
DDX55-206ENST00000539934 DDX11L8A8MPP1 907 aa14.65□□□□□ -0.06
DDX55-206ENST00000539934 MCTP2Q6DN12 878 aa14.65□□□□□ -0.06
DDX55-206ENST00000539934 PPP1R42Q7Z4L9 355 aa14.65□□□□□ -0.06
DDX55-206ENST00000539934 LRRCC1Q9C099 1032 aa14.65□□□□□ -0.06
DDX55-206ENST00000539934 GZF1Q9H116 711 aaPredicted RBP14.65□□□□□ -0.06
DDX55-206ENST00000539934 CREBZFQ9NS37 354 aa14.65□□□□□ -0.06
DDX55-206ENST00000539934 PIP4K2AP48426 406 aaPredicted RBP14.65□□□□□ -0.06
DDX55-206ENST00000539934 AP1ARQ63HQ0 302 aa14.65□□□□□ -0.06
DDX55-206ENST00000539934 TBC1D9BQ66K14 1250 aa14.65□□□□□ -0.06
DDX55-206ENST00000539934 CHADLQ6NUI6 762 aa14.65□□□□□ -0.06
DDX55-206ENST00000539934 MAMSTRQ6ZN01 415 aa14.65□□□□□ -0.06
DDX55-206ENST00000539934 ANKRD13AQ8IZ07 590 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms