RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 ERO1AQ96HE7 468 aa18.91■□□□□ 0.62
USB1-203ENST00000539737 MS4A4AQ96JQ5 239 aa18.91■□□□□ 0.62
USB1-203ENST00000539737 CNNM1Q9NRU3 951 aa18.91■□□□□ 0.62
USB1-203ENST00000539737 PPP2R3BQ9Y5P8 575 aa18.91■□□□□ 0.62
USB1-203ENST00000539737 PTCH2Q9Y6C5 1203 aa18.91■□□□□ 0.62
USB1-203ENST00000539737 E9PSI1 815 aa18.9■□□□□ 0.62
USB1-203ENST00000539737 SP3Q02447 781 aa18.9■□□□□ 0.62
USB1-203ENST00000539737 VGLL4Q14135 290 aa18.9■□□□□ 0.62
USB1-203ENST00000539737 TAF7LQ5H9L4 462 aa18.9■□□□□ 0.62
USB1-203ENST00000539737 LDHAL6AQ6ZMR3 332 aa18.9■□□□□ 0.62
USB1-203ENST00000539737 ANKRD13AQ8IZ07 590 aa18.9■□□□□ 0.62
USB1-203ENST00000539737 ARAP2Q8WZ64 1704 aa18.89■□□□□ 0.61
USB1-203ENST00000539737 CHAF1AQ13111 956 aaPredicted RBP18.89■□□□□ 0.61
USB1-203ENST00000539737 OTUD5Q96G74 571 aa18.89■□□□□ 0.61
USB1-203ENST00000539737 TRIOBPQ9H2D6 2365 aa18.88■□□□□ 0.61
USB1-203ENST00000539737 CCL15-CCL14A0A0B4J2E2 113 aa18.88■□□□□ 0.61
USB1-203ENST00000539737 INHBEP58166 350 aa18.88■□□□□ 0.61
USB1-203ENST00000539737 CCL15Q16663 113 aa18.88■□□□□ 0.61
USB1-203ENST00000539737 DZIP1LQ8IYY4 767 aaKnown RBP18.88■□□□□ 0.61
USB1-203ENST00000539737 TDRD7Q8NHU6 1098 aaKnown RBP18.88■□□□□ 0.61
USB1-203ENST00000539737 ARMC5Q96C12 935 aa18.88■□□□□ 0.61
USB1-203ENST00000539737 KAZALD1Q96I82 304 aa18.88■□□□□ 0.61
USB1-203ENST00000539737 SUCLG2Q96I99 432 aa18.88■□□□□ 0.61
USB1-203ENST00000539737 FAM84BQ96KN1 310 aaPredicted RBP18.88■□□□□ 0.61
USB1-203ENST00000539737 SZT2Q5T011 3432 aa18.88■□□□□ 0.61
USB1-203ENST00000539737 TESPA1A2RU30 521 aaPredicted RBP18.87■□□□□ 0.61
USB1-203ENST00000539737 CRKP46108 304 aa18.87■□□□□ 0.61
USB1-203ENST00000539737 MMP14P50281 582 aa18.87■□□□□ 0.61
USB1-203ENST00000539737 TAF1CQ15572 869 aaPredicted RBP18.87■□□□□ 0.61
USB1-203ENST00000539737 CCDC57Q2TAC2 916 aa18.87■□□□□ 0.61
USB1-203ENST00000539737 SLC4A10Q6U841 1118 aa18.87■□□□□ 0.61
USB1-203ENST00000539737 FAM205AQ6ZU69 1335 aa18.87■□□□□ 0.61
USB1-203ENST00000539737 SH3TC2Q8TF17 1288 aa18.87■□□□□ 0.61
USB1-203ENST00000539737 GRM8O00222 908 aa18.86■□□□□ 0.61
USB1-203ENST00000539737 FKBP1AP62942 108 aaKnown RBP18.86■□□□□ 0.61
USB1-203ENST00000539737 ZNF333Q96JL9 665 aa18.86■□□□□ 0.61
USB1-203ENST00000539737 HIBADHP31937 336 aaKnown RBP18.85■□□□□ 0.61
USB1-203ENST00000539737 LRRC24Q50LG9 513 aa18.85■□□□□ 0.61
USB1-203ENST00000539737 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.85■□□□□ 0.61
USB1-203ENST00000539737 KLHDC4Q8TBB5 520 aa18.85■□□□□ 0.61
USB1-203ENST00000539737 CACNA1FO60840 1977 aa18.84■□□□□ 0.61
USB1-203ENST00000539737 FXR1P51114 621 aaKnown RBP eCLIP18.84■□□□□ 0.61
USB1-203ENST00000539737 SLFN5Q08AF3 891 aa18.84■□□□□ 0.61
USB1-203ENST00000539737 INTS3Q68E01 1043 aaKnown RBP18.84■□□□□ 0.61
USB1-203ENST00000539737 OTUD7BQ6GQQ9 843 aa18.84■□□□□ 0.61
USB1-203ENST00000539737 ZKSCAN4Q969J2 545 aaPredicted RBP18.84■□□□□ 0.61
USB1-203ENST00000539737 COLQQ9Y215 455 aaPredicted RBP18.84■□□□□ 0.61
USB1-203ENST00000539737 SNCAIPQ9Y6H5 919 aa18.84■□□□□ 0.61
USB1-203ENST00000539737 NBPF7P0C2Y1 421 aaPredicted RBP18.83■□□□□ 0.6
USB1-203ENST00000539737 CTGFP29279 349 aa18.83■□□□□ 0.6
USB1-203ENST00000539737 MAP3K9P80192 1104 aa18.83■□□□□ 0.6
USB1-203ENST00000539737 HNRNPUQ00839 825 aaKnown RBP eCLIP18.83■□□□□ 0.6
USB1-203ENST00000539737 C9orf78Q9NZ63 289 aaPredicted RBP18.83■□□□□ 0.6
USB1-203ENST00000539737 SLC9C1Q4G0N8 1177 aa18.82■□□□□ 0.6
USB1-203ENST00000539737 SERPINA10Q9UK55 444 aa18.82■□□□□ 0.6
USB1-203ENST00000539737 BTBD19C9JJ37 291 aa18.81■□□□□ 0.6
USB1-203ENST00000539737 SLC4A8Q2Y0W8 1093 aa18.81■□□□□ 0.6
USB1-203ENST00000539737 GCC1Q96CN9 775 aa18.81■□□□□ 0.6
USB1-203ENST00000539737 BICC1Q9H694 974 aaKnown RBP18.81■□□□□ 0.6
USB1-203ENST00000539737 ZFYVE28Q9HCC9 887 aa18.81■□□□□ 0.6
USB1-203ENST00000539737 RANBP2P49792 3224 aaKnown RBP18.81■□□□□ 0.6
USB1-203ENST00000539737 BCAMP50895 628 aa18.8■□□□□ 0.6
USB1-203ENST00000539737 TNFAIP1Q13829 316 aa18.8■□□□□ 0.6
USB1-203ENST00000539737 UBE4AQ14139 1066 aa18.8■□□□□ 0.6
USB1-203ENST00000539737 MIGA2Q7L4E1 593 aa18.8■□□□□ 0.6
USB1-203ENST00000539737 WRNIP1Q96S55 665 aa18.8■□□□□ 0.6
USB1-203ENST00000539737 TMEM106CQ9BVX2 250 aa18.8■□□□□ 0.6
USB1-203ENST00000539737 RIPOR2Q9Y4F9 1068 aa18.8■□□□□ 0.6
USB1-203ENST00000539737 CSADQ9Y600 493 aa18.8■□□□□ 0.6
USB1-203ENST00000539737 H0YGN5 161 aa18.79■□□□□ 0.6
USB1-203ENST00000539737 IRF6O14896 467 aa18.79■□□□□ 0.6
USB1-203ENST00000539737 GTF2A2P52657 109 aa18.79■□□□□ 0.6
USB1-203ENST00000539737 MTFR1Q15390 333 aa18.79■□□□□ 0.6
USB1-203ENST00000539737 FBXO33Q7Z6M2 555 aa18.79■□□□□ 0.6
USB1-203ENST00000539737 ANKRD44Q8N8A2 993 aa18.79■□□□□ 0.6
USB1-203ENST00000539737 CPA4Q9UI42 421 aa18.79■□□□□ 0.6
USB1-203ENST00000539737 SPDYE5A6NIY4 337 aa18.78■□□□□ 0.6
USB1-203ENST00000539737 UNCXA6NJT0 531 aa18.78■□□□□ 0.6
USB1-203ENST00000539737 INPP5BP32019 993 aa18.78■□□□□ 0.6
USB1-203ENST00000539737 CDCA7LQ96GN5 454 aa18.78■□□□□ 0.6
USB1-203ENST00000539737 SLURP2P0DP57 97 aa18.77■□□□□ 0.6
USB1-203ENST00000539737 METTL24Q5JXM2 366 aa18.77■□□□□ 0.6
USB1-203ENST00000539737 VPS37DQ86XT2 251 aa18.77■□□□□ 0.6
USB1-203ENST00000539737 TRMT2AQ8IZ69 625 aaKnown RBP18.77■□□□□ 0.6
USB1-203ENST00000539737 SHISA4Q96DD7 197 aa18.77■□□□□ 0.6
USB1-203ENST00000539737 SRCIN1Q9C0H9 1055 aa18.77■□□□□ 0.6
USB1-203ENST00000539737 ZBED9Q6R2W3 1325 aa18.76■□□□□ 0.59
USB1-203ENST00000539737 FRAT2O75474 233 aaPredicted RBP18.76■□□□□ 0.59
USB1-203ENST00000539737 CT47B1P0C2W7 299 aaPredicted RBP18.76■□□□□ 0.59
USB1-203ENST00000539737 TNNI2P48788 182 aa18.76■□□□□ 0.59
USB1-203ENST00000539737 LACTBP83111 547 aaPredicted RBP18.76■□□□□ 0.59
USB1-203ENST00000539737 APOBEC3HQ6NTF7 200 aaKnown RBP18.76■□□□□ 0.59
USB1-203ENST00000539737 VGLL2Q8N8G2 317 aa18.76■□□□□ 0.59
USB1-203ENST00000539737 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.76■□□□□ 0.59
USB1-203ENST00000539737 TCP10Q12799 353 aa18.75■□□□□ 0.59
USB1-203ENST00000539737 TEKT1Q969V4 418 aa18.75■□□□□ 0.59
USB1-203ENST00000539737 TLR2O60603 784 aa18.74■□□□□ 0.59
USB1-203ENST00000539737 ALDH1L1O75891 902 aa18.74■□□□□ 0.59
USB1-203ENST00000539737 DIXDC1Q155Q3 683 aa18.74■□□□□ 0.59
USB1-203ENST00000539737 MROH5Q6ZUA9 1318 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms