RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 ZBTB48P10074 688 aaPredicted RBP17.53■□□□□ 0.4
CCND1-204ENST00000539241 CRKP46108 304 aa17.53■□□□□ 0.4
CCND1-204ENST00000539241 PKN2Q16513 984 aaKnown RBP17.53■□□□□ 0.4
CCND1-204ENST00000539241 SMC4Q9NTJ3 1288 aa17.53■□□□□ 0.4
CCND1-204ENST00000539241 USP2O75604 605 aaPredicted RBP17.52■□□□□ 0.4
CCND1-204ENST00000539241 SOX10P56693 466 aa17.52■□□□□ 0.4
CCND1-204ENST00000539241 INHBEP58166 350 aa17.52■□□□□ 0.4
CCND1-204ENST00000539241 GRIK5Q16478 980 aa17.52■□□□□ 0.4
CCND1-204ENST00000539241 TBC1D22AQ8WUA7 517 aa17.52■□□□□ 0.4
CCND1-204ENST00000539241 R3HDMLQ9H3Y0 253 aa17.52■□□□□ 0.4
CCND1-204ENST00000539241 FKTNO75072 461 aa17.51■□□□□ 0.39
CCND1-204ENST00000539241 BCAMP50895 628 aa17.51■□□□□ 0.39
CCND1-204ENST00000539241 IFNL1Q8IU54 200 aa17.51■□□□□ 0.39
CCND1-204ENST00000539241 ANKRD13AQ8IZ07 590 aa17.51■□□□□ 0.39
CCND1-204ENST00000539241 HPS5Q9UPZ3 1129 aa17.51■□□□□ 0.39
CCND1-204ENST00000539241 TCP10L2B9ZVM9 353 aa17.5■□□□□ 0.39
CCND1-204ENST00000539241 IFIT1P09914 478 aaKnown RBP17.5■□□□□ 0.39
CCND1-204ENST00000539241 FGFR2P21802 821 aa17.5■□□□□ 0.39
CCND1-204ENST00000539241 GJA5P36382 358 aa17.5■□□□□ 0.39
CCND1-204ENST00000539241 HDLBPQ00341 1268 aaKnown RBP17.5■□□□□ 0.39
CCND1-204ENST00000539241 PUM3Q15397 648 aaKnown RBP17.5■□□□□ 0.39
CCND1-204ENST00000539241 YTHDC1Q96MU7 727 aaKnown RBP17.5■□□□□ 0.39
CCND1-204ENST00000539241 KIF16BQ96L93 1317 aa17.49■□□□□ 0.39
CCND1-204ENST00000539241 EYA2O00167 538 aa17.49■□□□□ 0.39
CCND1-204ENST00000539241 IGF2BP3O00425 579 aaKnown RBP eCLIP17.49■□□□□ 0.39
CCND1-204ENST00000539241 RFX5P48382 616 aaPredicted RBP17.49■□□□□ 0.39
CCND1-204ENST00000539241 TNNI2P48788 182 aa17.49■□□□□ 0.39
CCND1-204ENST00000539241 CDAN1Q8IWY9 1227 aa17.49■□□□□ 0.39
CCND1-204ENST00000539241 TEPSINQ96N21 525 aa17.49■□□□□ 0.39
CCND1-204ENST00000539241 TMEM39BQ9GZU3 492 aa17.49■□□□□ 0.39
CCND1-204ENST00000539241 TEKT1Q969V4 418 aa17.48■□□□□ 0.39
CCND1-204ENST00000539241 ECM29Q5VYK3 1845 aa17.48■□□□□ 0.39
CCND1-204ENST00000539241 CT47B1P0C2W7 299 aaPredicted RBP17.47■□□□□ 0.39
CCND1-204ENST00000539241 UBTFL1P0CB47 393 aaPredicted RBP17.47■□□□□ 0.39
CCND1-204ENST00000539241 SLC5A1P13866 664 aa17.47■□□□□ 0.39
CCND1-204ENST00000539241 FBXO46Q6PJ61 603 aaPredicted RBP17.47■□□□□ 0.39
CCND1-204ENST00000539241 LPIN2Q92539 896 aa17.47■□□□□ 0.39
CCND1-204ENST00000539241 ELP3Q9H9T3 547 aa17.47■□□□□ 0.39
CCND1-204ENST00000539241 SUGT1Q9Y2Z0 365 aa17.47■□□□□ 0.39
CCND1-204ENST00000539241 MAST3O60307 1309 aa17.47■□□□□ 0.39
CCND1-204ENST00000539241 CACNB3P54284 484 aa17.46■□□□□ 0.39
CCND1-204ENST00000539241 OTUD7BQ6GQQ9 843 aa17.46■□□□□ 0.39
CCND1-204ENST00000539241 OPTNQ96CV9 577 aa17.46■□□□□ 0.39
CCND1-204ENST00000539241 ZDHHC15Q96MV8 337 aa17.46■□□□□ 0.39
CCND1-204ENST00000539241 MRIQ9BWK5 157 aa17.46■□□□□ 0.39
CCND1-204ENST00000539241 TMOD2Q9NZR1 351 aa17.46■□□□□ 0.39
CCND1-204ENST00000539241 PCDH10Q9P2E7 1040 aa17.46■□□□□ 0.39
CCND1-204ENST00000539241 NOB1Q9ULX3 412 aaKnown RBP17.46■□□□□ 0.39
CCND1-204ENST00000539241 MAP3K9P80192 1104 aa17.45■□□□□ 0.38
CCND1-204ENST00000539241 APOBEC3HQ6NTF7 200 aaKnown RBP17.45■□□□□ 0.38
CCND1-204ENST00000539241 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.45■□□□□ 0.38
CCND1-204ENST00000539241 ATG9AQ7Z3C6 839 aa17.45■□□□□ 0.38
CCND1-204ENST00000539241 API5Q9BZZ5 524 aaKnown RBP17.45■□□□□ 0.38
CCND1-204ENST00000539241 ARAP2Q8WZ64 1704 aa17.44■□□□□ 0.38
CCND1-204ENST00000539241 TESPA1A2RU30 521 aaPredicted RBP17.44■□□□□ 0.38
CCND1-204ENST00000539241 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.44■□□□□ 0.38
CCND1-204ENST00000539241 WDR66Q8TBY9 1149 aa17.44■□□□□ 0.38
CCND1-204ENST00000539241 PTPN18Q99952 460 aa17.44■□□□□ 0.38
CCND1-204ENST00000539241 SIL1Q9H173 461 aa17.44■□□□□ 0.38
CCND1-204ENST00000539241 FBXO3Q9UK99 471 aa17.44■□□□□ 0.38
CCND1-204ENST00000539241 CSADQ9Y600 493 aa17.44■□□□□ 0.38
CCND1-204ENST00000539241 CIAO1O76071 339 aa17.43■□□□□ 0.38
CCND1-204ENST00000539241 CRHR2Q13324 411 aa17.43■□□□□ 0.38
CCND1-204ENST00000539241 VGLL4Q14135 290 aa17.43■□□□□ 0.38
CCND1-204ENST00000539241 HHIPL2Q6UWX4 724 aa17.43■□□□□ 0.38
CCND1-204ENST00000539241 FAM83AQ86UY5 434 aa17.43■□□□□ 0.38
CCND1-204ENST00000539241 CNKSR2Q8WXI2 1034 aa17.43■□□□□ 0.38
CCND1-204ENST00000539241 CEP126Q9P2H0 1117 aa17.43■□□□□ 0.38
CCND1-204ENST00000539241 TRIM17Q9Y577 477 aa17.43■□□□□ 0.38
CCND1-204ENST00000539241 ATP2B3Q16720 1220 aa17.42■□□□□ 0.38
CCND1-204ENST00000539241 FKBP1CQ5VVH2 108 aa17.42■□□□□ 0.38
CCND1-204ENST00000539241 MS4A4AQ96JQ5 239 aa17.42■□□□□ 0.38
CCND1-204ENST00000539241 HDAC5Q9UQL6 1122 aa17.42■□□□□ 0.38
CCND1-204ENST00000539241 LRRFIP2Q9Y608 721 aaKnown RBP17.42■□□□□ 0.38
CCND1-204ENST00000539241 TNRC18O15417 2968 aaPredicted RBP17.41■□□□□ 0.38
CCND1-204ENST00000539241 RARSP54136 660 aaKnown RBP17.41■□□□□ 0.38
CCND1-204ENST00000539241 OTOP1Q7RTM1 612 aa17.41■□□□□ 0.38
CCND1-204ENST00000539241 BRI3BPQ8WY22 251 aa17.41■□□□□ 0.38
CCND1-204ENST00000539241 ERO1AQ96HE7 468 aa17.41■□□□□ 0.38
CCND1-204ENST00000539241 PA2G4Q9UQ80 394 aaKnown RBP17.41■□□□□ 0.38
CCND1-204ENST00000539241 HTTP42858 3142 aa17.4■□□□□ 0.38
CCND1-204ENST00000539241 CCL15-CCL14A0A0B4J2E2 113 aa17.4■□□□□ 0.38
CCND1-204ENST00000539241 IL15P40933 162 aaPredicted RBP17.4■□□□□ 0.38
CCND1-204ENST00000539241 GTF2A2P52657 109 aa17.4■□□□□ 0.38
CCND1-204ENST00000539241 CCL15Q16663 113 aa17.4■□□□□ 0.38
CCND1-204ENST00000539241 CD99L2Q8TCZ2 262 aa17.4■□□□□ 0.38
CCND1-204ENST00000539241 HOOK2Q96ED9 719 aa17.4■□□□□ 0.38
CCND1-204ENST00000539241 OTUD5Q96G74 571 aa17.4■□□□□ 0.38
CCND1-204ENST00000539241 WRNIP1Q96S55 665 aa17.4■□□□□ 0.38
CCND1-204ENST00000539241 MEIS3Q99687 375 aa17.4■□□□□ 0.38
CCND1-204ENST00000539241 GNL3LQ9NVN8 582 aaKnown RBP17.4■□□□□ 0.38
CCND1-204ENST00000539241 RPAP1Q9BWH6 1393 aaPredicted RBP17.4■□□□□ 0.38
CCND1-204ENST00000539241 SPDYE5A6NIY4 337 aa17.39■□□□□ 0.37
CCND1-204ENST00000539241 PRDX5P30044 214 aa17.39■□□□□ 0.37
CCND1-204ENST00000539241 DAGLAQ9Y4D2 1042 aa17.39■□□□□ 0.37
CCND1-204ENST00000539241 SNCAIPQ9Y6H5 919 aa17.39■□□□□ 0.37
CCND1-204ENST00000539241 LDHBP07195 334 aaKnown RBP17.38■□□□□ 0.37
CCND1-204ENST00000539241 PHKA1P46020 1223 aa17.38■□□□□ 0.37
CCND1-204ENST00000539241 SP3Q02447 781 aa17.38■□□□□ 0.37
CCND1-204ENST00000539241 TAF1CQ15572 869 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms