RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 STMN4Q9H169 189 aaPredicted RBP18.97■□□□□ 0.63
SCARB1-205ENST00000538291 NOD1Q9Y239 953 aa18.97■□□□□ 0.63
SCARB1-205ENST00000538291 SYT1P21579 422 aa18.97■□□□□ 0.63
SCARB1-205ENST00000538291 CCDC65Q8IXS2 484 aa18.97■□□□□ 0.63
SCARB1-205ENST00000538291 DNAI1Q9UI46 699 aa18.97■□□□□ 0.63
SCARB1-205ENST00000538291 UBXN1Q04323 297 aa18.97■□□□□ 0.63
SCARB1-205ENST00000538291 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.97■□□□□ 0.63
SCARB1-205ENST00000538291 NSRP1Q9H0G5 558 aaKnown RBP18.97■□□□□ 0.63
SCARB1-205ENST00000538291 SAP30BPQ9UHR5 308 aaKnown RBP18.97■□□□□ 0.63
SCARB1-205ENST00000538291 GGA1Q9UJY5 639 aa18.97■□□□□ 0.63
SCARB1-205ENST00000538291 ATP6V0A2Q9Y487 856 aa18.97■□□□□ 0.63
SCARB1-205ENST00000538291 KCNA6P17658 529 aa18.96■□□□□ 0.63
SCARB1-205ENST00000538291 AK2P54819 239 aa18.96■□□□□ 0.63
SCARB1-205ENST00000538291 PLBD2Q8NHP8 589 aa18.96■□□□□ 0.63
SCARB1-205ENST00000538291 PAIP2Q9BPZ3 127 aaKnown RBP18.96■□□□□ 0.63
SCARB1-205ENST00000538291 FAM89AQ96GI7 184 aa18.96■□□□□ 0.63
SCARB1-205ENST00000538291 ZFYVE9O95405 1425 aa18.96■□□□□ 0.63
SCARB1-205ENST00000538291 EYA2O00167 538 aa18.96■□□□□ 0.63
SCARB1-205ENST00000538291 CCDC186Q7Z3E2 898 aa18.96■□□□□ 0.63
SCARB1-205ENST00000538291 RAPGEF6Q8TEU7 1601 aa18.95■□□□□ 0.62
SCARB1-205ENST00000538291 ITGA6P23229 1130 aa18.95■□□□□ 0.62
SCARB1-205ENST00000538291 PUM3Q15397 648 aaKnown RBP18.95■□□□□ 0.62
SCARB1-205ENST00000538291 SV2BQ7L1I2 683 aa18.95■□□□□ 0.62
SCARB1-205ENST00000538291 RXRAP19793 462 aa18.95■□□□□ 0.62
SCARB1-205ENST00000538291 STX17P56962 302 aa18.95■□□□□ 0.62
SCARB1-205ENST00000538291 HOOK2Q96ED9 719 aa18.95■□□□□ 0.62
SCARB1-205ENST00000538291 FRMD4BQ9Y2L6 1034 aa18.95■□□□□ 0.62
SCARB1-205ENST00000538291 ABCC1P33527 1531 aa18.95■□□□□ 0.62
SCARB1-205ENST00000538291 CTAGE9A4FU28 777 aa18.95■□□□□ 0.62
SCARB1-205ENST00000538291 RUFY3Q7L099 469 aa18.95■□□□□ 0.62
SCARB1-205ENST00000538291 YTHDC2Q9H6S0 1430 aaKnown RBP18.95■□□□□ 0.62
SCARB1-205ENST00000538291 GPCPD1Q9NPB8 672 aa18.95■□□□□ 0.62
SCARB1-205ENST00000538291 PKD2L1Q9P0L9 805 aa18.95■□□□□ 0.62
SCARB1-205ENST00000538291 LETM2Q2VYF4 491 aa18.95■□□□□ 0.62
SCARB1-205ENST00000538291 CCDC63Q8NA47 563 aa18.95■□□□□ 0.62
SCARB1-205ENST00000538291 FNBP1Q96RU3 617 aa18.95■□□□□ 0.62
SCARB1-205ENST00000538291 TXNDC16Q9P2K2 825 aa18.95■□□□□ 0.62
SCARB1-205ENST00000538291 TUBB4AP04350 444 aa18.94■□□□□ 0.62
SCARB1-205ENST00000538291 TSPYL6Q8N831 410 aa18.94■□□□□ 0.62
SCARB1-205ENST00000538291 IVNS1ABPQ9Y6Y0 642 aa18.94■□□□□ 0.62
SCARB1-205ENST00000538291 CERS3Q8IU89 383 aa18.94■□□□□ 0.62
SCARB1-205ENST00000538291 PRIMPOLQ96LW4 560 aa18.94■□□□□ 0.62
SCARB1-205ENST00000538291 ZKSCAN3Q9BRR0 538 aa18.94■□□□□ 0.62
SCARB1-205ENST00000538291 CALCOCO1Q9P1Z2 691 aa18.94■□□□□ 0.62
SCARB1-205ENST00000538291 ITSN2Q9NZM3 1697 aa18.94■□□□□ 0.62
SCARB1-205ENST00000538291 GTF2F1P35269 517 aaKnown RBP eCLIP18.94■□□□□ 0.625e-7■■■□□ 18.9
SCARB1-205ENST00000538291 EIF6P56537 245 aaKnown RBP18.94■□□□□ 0.62
SCARB1-205ENST00000538291 PLIN2Q99541 437 aa18.94■□□□□ 0.62
SCARB1-205ENST00000538291 MXRA7P84157 204 aa18.94■□□□□ 0.62
SCARB1-205ENST00000538291 BIRC3Q13489 604 aa18.94■□□□□ 0.62
SCARB1-205ENST00000538291 PDE8AO60658 829 aa18.93■□□□□ 0.62
SCARB1-205ENST00000538291 PPP1R2P41236 205 aa18.93■□□□□ 0.62
SCARB1-205ENST00000538291 PLCD1P51178 756 aa18.93■□□□□ 0.62
SCARB1-205ENST00000538291 SMTNP53814 917 aa18.93■□□□□ 0.62
SCARB1-205ENST00000538291 WDR44Q5JSH3 913 aa18.93■□□□□ 0.62
SCARB1-205ENST00000538291 SNX21Q969T3 373 aa18.93■□□□□ 0.62
SCARB1-205ENST00000538291 GLT8D2Q9H1C3 349 aa18.93■□□□□ 0.62
SCARB1-205ENST00000538291 GPHNQ9NQX3 736 aaPredicted RBP18.93■□□□□ 0.62
SCARB1-205ENST00000538291 TBX22Q9Y458 520 aa18.93■□□□□ 0.62
SCARB1-205ENST00000538291 MAP3K19Q56UN5 1328 aa18.93■□□□□ 0.62
SCARB1-205ENST00000538291 SLC8A3P57103 927 aa18.93■□□□□ 0.62
SCARB1-205ENST00000538291 KRT24Q2M2I5 525 aa18.93■□□□□ 0.62
SCARB1-205ENST00000538291 CCDC14Q49A88 953 aa18.93■□□□□ 0.62
SCARB1-205ENST00000538291 A0A1B0GUL7 405 aa18.93■□□□□ 0.62
SCARB1-205ENST00000538291 DCAF17Q5H9S7 520 aaPredicted RBP18.93■□□□□ 0.62
SCARB1-205ENST00000538291 ZNF790Q6PG37 636 aa18.93■□□□□ 0.62
SCARB1-205ENST00000538291 FCHSD1Q86WN1 690 aa18.93■□□□□ 0.62
SCARB1-205ENST00000538291 ARFGAP3Q9NP61 516 aa18.93■□□□□ 0.62
SCARB1-205ENST00000538291 ATP2A2P16615 1042 aaKnown RBP18.93■□□□□ 0.62
SCARB1-205ENST00000538291 DKC1O60832 514 aaKnown RBP eCLIP18.92■□□□□ 0.621e-7■■■■□ 19.3
SCARB1-205ENST00000538291 WDR66Q8TBY9 1149 aa18.92■□□□□ 0.62
SCARB1-205ENST00000538291 TTC14Q96N46 770 aa18.92■□□□□ 0.62
SCARB1-205ENST00000538291 ZNF408Q9H9D4 720 aa18.92■□□□□ 0.62
SCARB1-205ENST00000538291 LUC7L2Q9Y383 392 aaKnown RBP18.92■□□□□ 0.62
SCARB1-205ENST00000538291 OPA1O60313 960 aa18.92■□□□□ 0.62
SCARB1-205ENST00000538291 TMEM87BQ96K49 555 aa18.92■□□□□ 0.62
SCARB1-205ENST00000538291 H0YIN7 160 aa18.92■□□□□ 0.62
SCARB1-205ENST00000538291 CCT6AP40227 531 aaKnown RBP18.92■□□□□ 0.62
SCARB1-205ENST00000538291 LARGE2Q8N3Y3 721 aa18.92■□□□□ 0.62
SCARB1-205ENST00000538291 METTL22Q9BUU2 404 aaPredicted RBP18.92■□□□□ 0.62
SCARB1-205ENST00000538291 WDR70Q9NW82 654 aa18.92■□□□□ 0.62
SCARB1-205ENST00000538291 FAM169AQ9Y6X4 670 aa18.92■□□□□ 0.62
SCARB1-205ENST00000538291 VWA3AA6NCI4 1184 aa18.91■□□□□ 0.62
SCARB1-205ENST00000538291 EPB41P11171 864 aaKnown RBP18.91■□□□□ 0.62
SCARB1-205ENST00000538291 HARSP12081 509 aaKnown RBP18.91■□□□□ 0.62
SCARB1-205ENST00000538291 PDE6BP35913 854 aa18.91■□□□□ 0.62
SCARB1-205ENST00000538291 TYRO3Q06418 890 aa18.91■□□□□ 0.62
SCARB1-205ENST00000538291 RAPGEF1Q13905 1077 aa18.91■□□□□ 0.62
SCARB1-205ENST00000538291 ATL3Q6DD88 541 aa18.91■□□□□ 0.62
SCARB1-205ENST00000538291 DPP8Q6V1X1 898 aaPredicted RBP18.91■□□□□ 0.62
SCARB1-205ENST00000538291 SERPINA10Q9UK55 444 aa18.91■□□□□ 0.62
SCARB1-205ENST00000538291 CHMLP26374 656 aa18.91■□□□□ 0.62
SCARB1-205ENST00000538291 HAUS3Q68CZ6 603 aa18.91■□□□□ 0.62
SCARB1-205ENST00000538291 SUPT20HQ8NEM7 779 aa18.91■□□□□ 0.62
SCARB1-205ENST00000538291 SRRTQ9BXP5 876 aaKnown RBP18.91■□□□□ 0.62
SCARB1-205ENST00000538291 STX10O60499 249 aa18.91■□□□□ 0.62
SCARB1-205ENST00000538291 ZNF174Q15697 407 aa18.91■□□□□ 0.62
SCARB1-205ENST00000538291 RILPL1Q5EBL4 403 aa18.91■□□□□ 0.62
SCARB1-205ENST00000538291 BABAM1Q9NWV8 329 aa18.91■□□□□ 0.62
SCARB1-205ENST00000538291 TICAM2Q86XR7 235 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms