RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 KIF22Q14807 665 aa11.23□□□□□ -0.61
SMAD3-203ENST00000537194 TEKT1Q969V4 418 aa11.23□□□□□ -0.61
SMAD3-203ENST00000537194 OPTNQ96CV9 577 aa11.23□□□□□ -0.61
SMAD3-203ENST00000537194 R3HDMLQ9H3Y0 253 aa11.23□□□□□ -0.61
SMAD3-203ENST00000537194 TDRD3Q9H7E2 651 aaKnown RBP11.23□□□□□ -0.61
SMAD3-203ENST00000537194 ELP3Q9H9T3 547 aa11.23□□□□□ -0.61
SMAD3-203ENST00000537194 IRS2Q9Y4H2 1338 aa11.23□□□□□ -0.61
SMAD3-203ENST00000537194 IFIT1P09914 478 aaKnown RBP11.22□□□□□ -0.61
SMAD3-203ENST00000537194 CRKP46108 304 aa11.22□□□□□ -0.61
SMAD3-203ENST00000537194 HDLBPQ00341 1268 aaKnown RBP11.22□□□□□ -0.61
SMAD3-203ENST00000537194 TAF1CQ15572 869 aaPredicted RBP11.22□□□□□ -0.61
SMAD3-203ENST00000537194 EPHA10Q5JZY3 1008 aa11.22□□□□□ -0.61
SMAD3-203ENST00000537194 FAM9BQ8IZU0 186 aa11.22□□□□□ -0.61
SMAD3-203ENST00000537194 CD99L2Q8TCZ2 262 aa11.22□□□□□ -0.61
SMAD3-203ENST00000537194 FAM84BQ96KN1 310 aaPredicted RBP11.22□□□□□ -0.61
SMAD3-203ENST00000537194 PTPN22Q9Y2R2 807 aa11.22□□□□□ -0.61
SMAD3-203ENST00000537194 PCDHAC2Q9Y5I4 1007 aa11.22□□□□□ -0.61
SMAD3-203ENST00000537194 TNRC18O15417 2968 aaPredicted RBP11.21□□□□□ -0.61
SMAD3-203ENST00000537194 CCL15-CCL14A0A0B4J2E2 113 aa11.21□□□□□ -0.61
SMAD3-203ENST00000537194 CCL15Q16663 113 aa11.21□□□□□ -0.61
SMAD3-203ENST00000537194 DCAF15Q66K64 600 aa11.21□□□□□ -0.61
SMAD3-203ENST00000537194 SUCLG2Q96I99 432 aa11.21□□□□□ -0.61
SMAD3-203ENST00000537194 SUGT1Q9Y2Z0 365 aa11.21□□□□□ -0.61
SMAD3-203ENST00000537194 TESPA1A2RU30 521 aaPredicted RBP11.2□□□□□ -0.62
SMAD3-203ENST00000537194 CETPP11597 493 aa11.2□□□□□ -0.62
SMAD3-203ENST00000537194 SLC9C1Q4G0N8 1177 aa11.2□□□□□ -0.62
SMAD3-203ENST00000537194 FBXO33Q7Z6M2 555 aa11.2□□□□□ -0.62
SMAD3-203ENST00000537194 OTUD5Q96G74 571 aa11.2□□□□□ -0.62
SMAD3-203ENST00000537194 TMEM39BQ9GZU3 492 aa11.2□□□□□ -0.62
SMAD3-203ENST00000537194 IQSEC3Q9UPP2 1182 aaPredicted RBP11.2□□□□□ -0.62
SMAD3-203ENST00000537194 RIPOR2Q9Y4F9 1068 aa11.2□□□□□ -0.62
SMAD3-203ENST00000537194 LAMB1P07942 1786 aa11.2□□□□□ -0.62
SMAD3-203ENST00000537194 SSC5DA1L4H1 1573 aa11.2□□□□□ -0.62
SMAD3-203ENST00000537194 PTPRCP08575 1304 aa11.19□□□□□ -0.62
SMAD3-203ENST00000537194 ARAP2Q8WZ64 1704 aa11.19□□□□□ -0.62
SMAD3-203ENST00000537194 PDE8BO95263 885 aa11.19□□□□□ -0.62
SMAD3-203ENST00000537194 SLC5A1P13866 664 aa11.19□□□□□ -0.62
SMAD3-203ENST00000537194 SNAPC2Q13487 334 aa11.19□□□□□ -0.62
SMAD3-203ENST00000537194 VGLL4Q14135 290 aa11.19□□□□□ -0.62
SMAD3-203ENST00000537194 PUM3Q15397 648 aaKnown RBP11.19□□□□□ -0.62
SMAD3-203ENST00000537194 SLC4A8Q2Y0W8 1093 aa11.19□□□□□ -0.62
SMAD3-203ENST00000537194 ERO1BQ86YB8 467 aa11.19□□□□□ -0.62
SMAD3-203ENST00000537194 MRIQ9BWK5 157 aa11.19□□□□□ -0.62
SMAD3-203ENST00000537194 PUS3Q9BZE2 481 aaKnown RBP11.19□□□□□ -0.62
SMAD3-203ENST00000537194 BICC1Q9H694 974 aaKnown RBP11.19□□□□□ -0.62
SMAD3-203ENST00000537194 ZCCHC17Q9NP64 241 aaKnown RBP11.19□□□□□ -0.62
SMAD3-203ENST00000537194 GNL3LQ9NVN8 582 aaKnown RBP11.19□□□□□ -0.62
SMAD3-203ENST00000537194 HDAC5Q9UQL6 1122 aa11.19□□□□□ -0.62
SMAD3-203ENST00000537194 MYH13Q9UKX3 1938 aa11.19□□□□□ -0.62
SMAD3-203ENST00000537194 OTOFQ9HC10 1997 aa11.18□□□□□ -0.62
SMAD3-203ENST00000537194 GNRH1P01148 92 aa11.18□□□□□ -0.62
SMAD3-203ENST00000537194 NBPF7P0C2Y1 421 aaPredicted RBP11.18□□□□□ -0.62
SMAD3-203ENST00000537194 GJA5P36382 358 aa11.18□□□□□ -0.62
SMAD3-203ENST00000537194 FKBP1CQ5VVH2 108 aa11.18□□□□□ -0.62
SMAD3-203ENST00000537194 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.18□□□□□ -0.62
SMAD3-203ENST00000537194 FAM83AQ86UY5 434 aa11.18□□□□□ -0.62
SMAD3-203ENST00000537194 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.18□□□□□ -0.626e-6■□□□□ 9
SMAD3-203ENST00000537194 WDR66Q8TBY9 1149 aa11.18□□□□□ -0.62
SMAD3-203ENST00000537194 ARMC5Q96C12 935 aa11.18□□□□□ -0.62
SMAD3-203ENST00000537194 MS4A4AQ96JQ5 239 aa11.18□□□□□ -0.62
SMAD3-203ENST00000537194 ZDHHC15Q96MV8 337 aa11.18□□□□□ -0.62
SMAD3-203ENST00000537194 WRNIP1Q96S55 665 aa11.18□□□□□ -0.62
SMAD3-203ENST00000537194 PTPN18Q99952 460 aa11.18□□□□□ -0.62
SMAD3-203ENST00000537194 UTYO14607 1347 aa11.17□□□□□ -0.62
SMAD3-203ENST00000537194 KIF16BQ96L93 1317 aa11.17□□□□□ -0.62
SMAD3-203ENST00000537194 ZNF316A6NFI3 1004 aaPredicted RBP11.17□□□□□ -0.62
SMAD3-203ENST00000537194 HOXD10P28358 340 aa11.17□□□□□ -0.62
SMAD3-203ENST00000537194 RABL6Q3YEC7 729 aaPredicted RBP11.17□□□□□ -0.62
SMAD3-203ENST00000537194 LRRC24Q50LG9 513 aa11.17□□□□□ -0.62
SMAD3-203ENST00000537194 HHIPL2Q6UWX4 724 aa11.17□□□□□ -0.62
SMAD3-203ENST00000537194 BRI3BPQ8WY22 251 aa11.17□□□□□ -0.62
SMAD3-203ENST00000537194 TEPSINQ96N21 525 aa11.17□□□□□ -0.62
SMAD3-203ENST00000537194 ZNF341Q9BYN7 854 aa11.17□□□□□ -0.62
SMAD3-203ENST00000537194 SPINK5Q9NQ38 1064 aaPredicted RBP11.17□□□□□ -0.62
SMAD3-203ENST00000537194 AOX1Q06278 1338 aa11.16□□□□□ -0.62
SMAD3-203ENST00000537194 POTEFA5A3E0 1075 aa11.16□□□□□ -0.62
SMAD3-203ENST00000537194 SPDYE5A6NIY4 337 aa11.16□□□□□ -0.62
SMAD3-203ENST00000537194 BCAMP50895 628 aa11.16□□□□□ -0.62
SMAD3-203ENST00000537194 PRMT2P55345 433 aa11.16□□□□□ -0.62
SMAD3-203ENST00000537194 PPIL2Q13356 520 aa11.16□□□□□ -0.62
SMAD3-203ENST00000537194 LPIN2Q92539 896 aa11.16□□□□□ -0.62
SMAD3-203ENST00000537194 RBBP6Q7Z6E9 1792 aaKnown RBP11.16□□□□□ -0.62
SMAD3-203ENST00000537194 E9PSI1 815 aa11.15□□□□□ -0.62
SMAD3-203ENST00000537194 TLR2O60603 784 aa11.15□□□□□ -0.62
SMAD3-203ENST00000537194 CACNB3P54284 484 aa11.15□□□□□ -0.62
SMAD3-203ENST00000537194 PPATQ06203 517 aa11.15□□□□□ -0.62
SMAD3-203ENST00000537194 MRPL50Q8N5N7 158 aaKnown RBP11.15□□□□□ -0.62
SMAD3-203ENST00000537194 CNKSR2Q8WXI2 1034 aa11.15□□□□□ -0.62
SMAD3-203ENST00000537194 KAZALD1Q96I82 304 aa11.15□□□□□ -0.62
SMAD3-203ENST00000537194 CEP126Q9P2H0 1117 aa11.15□□□□□ -0.62
SMAD3-203ENST00000537194 EYA2O00167 538 aa11.14□□□□□ -0.63
SMAD3-203ENST00000537194 IRF6O14896 467 aa11.14□□□□□ -0.63
SMAD3-203ENST00000537194 LDHBP07195 334 aaKnown RBP11.14□□□□□ -0.63
SMAD3-203ENST00000537194 EN2P19622 333 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-203ENST00000537194 SLF2Q8IX21 1173 aa11.14□□□□□ -0.63
SMAD3-203ENST00000537194 FAM43AQ8N2R8 423 aa11.14□□□□□ -0.63
SMAD3-203ENST00000537194 ZGPATQ8N5A5 531 aaKnown RBP11.14□□□□□ -0.63
SMAD3-203ENST00000537194 ANKRD44Q8N8A2 993 aa11.14□□□□□ -0.63
SMAD3-203ENST00000537194 FAM151AQ8WW52 585 aa11.14□□□□□ -0.63
SMAD3-203ENST00000537194 ZNF333Q96JL9 665 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms