RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 FRAT2O75474 233 aaPredicted RBP24.69■■□□□ 1.54
TNFRSF1B-204ENST00000536782 USP2O75604 605 aaPredicted RBP24.69■■□□□ 1.54
TNFRSF1B-204ENST00000536782 CRKP46108 304 aa24.69■■□□□ 1.54
TNFRSF1B-204ENST00000536782 ALDH1L2Q3SY69 923 aa24.69■■□□□ 1.54
TNFRSF1B-204ENST00000536782 VGLL2Q8N8G2 317 aa24.69■■□□□ 1.54
TNFRSF1B-204ENST00000536782 KLHDC4Q8TBB5 520 aa24.69■■□□□ 1.54
TNFRSF1B-204ENST00000536782 HPS5Q9UPZ3 1129 aa24.69■■□□□ 1.54
TNFRSF1B-204ENST00000536782 FKTNO75072 461 aa24.68■■□□□ 1.54
TNFRSF1B-204ENST00000536782 CHAF1AQ13111 956 aaPredicted RBP24.68■■□□□ 1.54
TNFRSF1B-204ENST00000536782 IFNL1Q8IU54 200 aa24.68■■□□□ 1.54
TNFRSF1B-204ENST00000536782 ANKRD13AQ8IZ07 590 aa24.68■■□□□ 1.54
TNFRSF1B-204ENST00000536782 TBC1D22AQ8WUA7 517 aa24.68■■□□□ 1.54
TNFRSF1B-204ENST00000536782 TNNI2P48788 182 aa24.66■■□□□ 1.54
TNFRSF1B-204ENST00000536782 HDLBPQ00341 1268 aaKnown RBP24.66■■□□□ 1.54
TNFRSF1B-204ENST00000536782 CDCA7LQ96GN5 454 aa24.66■■□□□ 1.54
TNFRSF1B-204ENST00000536782 SMC4Q9NTJ3 1288 aa24.66■■□□□ 1.54
TNFRSF1B-204ENST00000536782 TCP10L2B9ZVM9 353 aa24.65■■□□□ 1.54
TNFRSF1B-204ENST00000536782 IFIT1P09914 478 aaKnown RBP24.65■■□□□ 1.54
TNFRSF1B-204ENST00000536782 BCAMP50895 628 aa24.65■■□□□ 1.54
TNFRSF1B-204ENST00000536782 PUM3Q15397 648 aaKnown RBP24.65■■□□□ 1.54
TNFRSF1B-204ENST00000536782 GRIK5Q16478 980 aa24.65■■□□□ 1.54
TNFRSF1B-204ENST00000536782 CENPFP49454 3210 aa24.65■■□□□ 1.54
TNFRSF1B-204ENST00000536782 TEKT1Q969V4 418 aa24.64■■□□□ 1.54
TNFRSF1B-204ENST00000536782 TEPSINQ96N21 525 aa24.64■■□□□ 1.54
TNFRSF1B-204ENST00000536782 KIF16BQ96L93 1317 aa24.63■■□□□ 1.53
TNFRSF1B-204ENST00000536782 IGF2BP3O00425 579 aaKnown RBP eCLIP24.63■■□□□ 1.53
TNFRSF1B-204ENST00000536782 OTUD7BQ6GQQ9 843 aa24.63■■□□□ 1.53
TNFRSF1B-204ENST00000536782 FBXO46Q6PJ61 603 aaPredicted RBP24.63■■□□□ 1.53
TNFRSF1B-204ENST00000536782 TMEM39BQ9GZU3 492 aa24.63■■□□□ 1.53
TNFRSF1B-204ENST00000536782 EYA2O00167 538 aa24.62■■□□□ 1.53
TNFRSF1B-204ENST00000536782 FGFR2P21802 821 aa24.62■■□□□ 1.53
TNFRSF1B-204ENST00000536782 GJA5P36382 358 aa24.62■■□□□ 1.53
TNFRSF1B-204ENST00000536782 RFX5P48382 616 aaPredicted RBP24.62■■□□□ 1.53
TNFRSF1B-204ENST00000536782 TRMT2AQ8IZ69 625 aaKnown RBP24.62■■□□□ 1.53
TNFRSF1B-204ENST00000536782 ELP3Q9H9T3 547 aa24.62■■□□□ 1.53
TNFRSF1B-204ENST00000536782 CDAN1Q8IWY9 1227 aa24.61■■□□□ 1.53
TNFRSF1B-204ENST00000536782 MRIQ9BWK5 157 aa24.61■■□□□ 1.53
TNFRSF1B-204ENST00000536782 SUGT1Q9Y2Z0 365 aa24.61■■□□□ 1.53
TNFRSF1B-204ENST00000536782 MAST3O60307 1309 aa24.61■■□□□ 1.53
TNFRSF1B-204ENST00000536782 CT47B1P0C2W7 299 aaPredicted RBP24.6■■□□□ 1.53
TNFRSF1B-204ENST00000536782 SLC5A1P13866 664 aa24.6■■□□□ 1.53
TNFRSF1B-204ENST00000536782 OPTNQ96CV9 577 aa24.6■■□□□ 1.53
TNFRSF1B-204ENST00000536782 KIAA0100Q14667 2235 aaKnown RBP24.59■■□□□ 1.53
TNFRSF1B-204ENST00000536782 UBTFL1P0CB47 393 aaPredicted RBP24.59■■□□□ 1.53
TNFRSF1B-204ENST00000536782 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.59■■□□□ 1.53
TNFRSF1B-204ENST00000536782 LPIN2Q92539 896 aa24.59■■□□□ 1.53
TNFRSF1B-204ENST00000536782 ZDHHC15Q96MV8 337 aa24.59■■□□□ 1.53
TNFRSF1B-204ENST00000536782 TMOD2Q9NZR1 351 aa24.59■■□□□ 1.53
TNFRSF1B-204ENST00000536782 MKI67P46013 3256 aaKnown RBP24.59■■□□□ 1.53
TNFRSF1B-204ENST00000536782 TESPA1A2RU30 521 aaPredicted RBP24.58■■□□□ 1.53
TNFRSF1B-204ENST00000536782 CACNB3P54284 484 aa24.58■■□□□ 1.53
TNFRSF1B-204ENST00000536782 MAP3K9P80192 1104 aa24.58■■□□□ 1.53
TNFRSF1B-204ENST00000536782 NOB1Q9ULX3 412 aaKnown RBP24.58■■□□□ 1.53
TNFRSF1B-204ENST00000536782 HHIPL2Q6UWX4 724 aa24.57■■□□□ 1.52
TNFRSF1B-204ENST00000536782 ATG9AQ7Z3C6 839 aa24.57■■□□□ 1.52
TNFRSF1B-204ENST00000536782 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.57■■□□□ 1.52
TNFRSF1B-204ENST00000536782 FBXO3Q9UK99 471 aa24.57■■□□□ 1.52
TNFRSF1B-204ENST00000536782 CSADQ9Y600 493 aa24.57■■□□□ 1.52
TNFRSF1B-204ENST00000536782 CRHR2Q13324 411 aa24.56■■□□□ 1.52
TNFRSF1B-204ENST00000536782 VGLL4Q14135 290 aa24.56■■□□□ 1.52
TNFRSF1B-204ENST00000536782 APOBEC3HQ6NTF7 200 aaKnown RBP24.56■■□□□ 1.52
TNFRSF1B-204ENST00000536782 WDR66Q8TBY9 1149 aa24.56■■□□□ 1.52
TNFRSF1B-204ENST00000536782 PTPN18Q99952 460 aa24.56■■□□□ 1.52
TNFRSF1B-204ENST00000536782 API5Q9BZZ5 524 aaKnown RBP24.56■■□□□ 1.52
TNFRSF1B-204ENST00000536782 TRIM17Q9Y577 477 aa24.56■■□□□ 1.52
TNFRSF1B-204ENST00000536782 FKBP1CQ5VVH2 108 aa24.55■■□□□ 1.52
TNFRSF1B-204ENST00000536782 FAM83AQ86UY5 434 aa24.55■■□□□ 1.52
TNFRSF1B-204ENST00000536782 ERO1AQ96HE7 468 aa24.55■■□□□ 1.52
TNFRSF1B-204ENST00000536782 MS4A4AQ96JQ5 239 aa24.55■■□□□ 1.52
TNFRSF1B-204ENST00000536782 SIL1Q9H173 461 aa24.55■■□□□ 1.52
TNFRSF1B-204ENST00000536782 HDAC5Q9UQL6 1122 aa24.55■■□□□ 1.52
TNFRSF1B-204ENST00000536782 CIAO1O76071 339 aa24.54■■□□□ 1.52
TNFRSF1B-204ENST00000536782 OTOP1Q7RTM1 612 aa24.54■■□□□ 1.52
TNFRSF1B-204ENST00000536782 CNKSR2Q8WXI2 1034 aa24.54■■□□□ 1.52
TNFRSF1B-204ENST00000536782 HOOK2Q96ED9 719 aa24.54■■□□□ 1.52
TNFRSF1B-204ENST00000536782 CEP126Q9P2H0 1117 aa24.54■■□□□ 1.52
TNFRSF1B-204ENST00000536782 MYH13Q9UKX3 1938 aa24.54■■□□□ 1.52
TNFRSF1B-204ENST00000536782 BRCA2P51587 3418 aa24.54■■□□□ 1.52
TNFRSF1B-204ENST00000536782 GTF2A2P52657 109 aa24.53■■□□□ 1.52
TNFRSF1B-204ENST00000536782 ATP2B3Q16720 1220 aa24.53■■□□□ 1.52
TNFRSF1B-204ENST00000536782 OTUD5Q96G74 571 aa24.52■■□□□ 1.52
TNFRSF1B-204ENST00000536782 GNL3LQ9NVN8 582 aaKnown RBP24.52■■□□□ 1.52
TNFRSF1B-204ENST00000536782 LRRFIP2Q9Y608 721 aaKnown RBP24.52■■□□□ 1.52
TNFRSF1B-204ENST00000536782 CCL15-CCL14A0A0B4J2E2 113 aa24.51■■□□□ 1.51
TNFRSF1B-204ENST00000536782 CAP1Q01518 475 aa24.51■■□□□ 1.51
TNFRSF1B-204ENST00000536782 SP3Q02447 781 aa24.51■■□□□ 1.51
TNFRSF1B-204ENST00000536782 CCL15Q16663 113 aa24.51■■□□□ 1.51
TNFRSF1B-204ENST00000536782 CD99L2Q8TCZ2 262 aa24.51■■□□□ 1.51
TNFRSF1B-204ENST00000536782 BRI3BPQ8WY22 251 aa24.51■■□□□ 1.51
TNFRSF1B-204ENST00000536782 RBBP6Q7Z6E9 1792 aaKnown RBP24.51■■□□□ 1.51
TNFRSF1B-204ENST00000536782 SPDYE5A6NIY4 337 aa24.5■■□□□ 1.51
TNFRSF1B-204ENST00000536782 CCER2I3L3R5 266 aa24.5■■□□□ 1.51
TNFRSF1B-204ENST00000536782 IL15P40933 162 aaPredicted RBP24.5■■□□□ 1.51
TNFRSF1B-204ENST00000536782 DCAF15Q66K64 600 aa24.5■■□□□ 1.51
TNFRSF1B-204ENST00000536782 WRNIP1Q96S55 665 aa24.5■■□□□ 1.51
TNFRSF1B-204ENST00000536782 SNCAIPQ9Y6H5 919 aa24.49■■□□□ 1.51
TNFRSF1B-204ENST00000536782 RPAP1Q9BWH6 1393 aaPredicted RBP24.49■■□□□ 1.51
TNFRSF1B-204ENST00000536782 RARSP54136 660 aaKnown RBP24.48■■□□□ 1.51
TNFRSF1B-204ENST00000536782 TAF1CQ15572 869 aaPredicted RBP24.48■■□□□ 1.51
TNFRSF1B-204ENST00000536782 ERO1BQ86YB8 467 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms