RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 ZNF521Q96K83 1311 aa10.54□□□□□ -0.72
RPUSD4-209ENST00000534393 SLC34A2O95436 690 aa10.53□□□□□ -0.72
RPUSD4-209ENST00000534393 FBXO33Q7Z6M2 555 aa10.53□□□□□ -0.72
RPUSD4-209ENST00000534393 MRPL50Q8N5N7 158 aaKnown RBP10.53□□□□□ -0.72
RPUSD4-209ENST00000534393 HOOK2Q96ED9 719 aa10.53□□□□□ -0.72
RPUSD4-209ENST00000534393 ERO1AQ96HE7 468 aa10.53□□□□□ -0.72
RPUSD4-209ENST00000534393 CLMNQ96JQ2 1002 aa10.53□□□□□ -0.72
RPUSD4-209ENST00000534393 PUS3Q9BZE2 481 aaKnown RBP10.53□□□□□ -0.72
RPUSD4-209ENST00000534393 TDRD3Q9H7E2 651 aaKnown RBP10.53□□□□□ -0.72
RPUSD4-209ENST00000534393 SUGT1Q9Y2Z0 365 aa10.53□□□□□ -0.72
RPUSD4-209ENST00000534393 PCDHAC2Q9Y5I4 1007 aa10.53□□□□□ -0.72
RPUSD4-209ENST00000534393 MAST3O60307 1309 aa10.53□□□□□ -0.72
RPUSD4-209ENST00000534393 KIF16BQ96L93 1317 aa10.53□□□□□ -0.72
RPUSD4-209ENST00000534393 TESPA1A2RU30 521 aaPredicted RBP10.52□□□□□ -0.73
RPUSD4-209ENST00000534393 WDHD1O75717 1129 aaPredicted RBP10.52□□□□□ -0.73
RPUSD4-209ENST00000534393 IFIT1P09914 478 aaKnown RBP10.52□□□□□ -0.73
RPUSD4-209ENST00000534393 CRKP46108 304 aa10.52□□□□□ -0.73
RPUSD4-209ENST00000534393 ARHGEF6Q15052 776 aa10.52□□□□□ -0.73
RPUSD4-209ENST00000534393 ALDH1L2Q3SY69 923 aa10.52□□□□□ -0.73
RPUSD4-209ENST00000534393 FKBP1CQ5VVH2 108 aa10.52□□□□□ -0.73
RPUSD4-209ENST00000534393 INTS3Q68E01 1043 aaKnown RBP10.52□□□□□ -0.73
RPUSD4-209ENST00000534393 TEKT1Q969V4 418 aa10.52□□□□□ -0.73
RPUSD4-209ENST00000534393 TMOD2Q9NZR1 351 aa10.52□□□□□ -0.73
RPUSD4-209ENST00000534393 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.52□□□□□ -0.73
RPUSD4-209ENST00000534393 FZD1Q9UP38 647 aa10.52□□□□□ -0.73
RPUSD4-209ENST00000534393 HDAC5Q9UQL6 1122 aa10.52□□□□□ -0.73
RPUSD4-209ENST00000534393 IGF2BP3O00425 579 aaKnown RBP eCLIP10.51□□□□□ -0.73
RPUSD4-209ENST00000534393 MAP3K9P80192 1104 aa10.51□□□□□ -0.73
RPUSD4-209ENST00000534393 PUM3Q15397 648 aaKnown RBP10.51□□□□□ -0.73
RPUSD4-209ENST00000534393 LRRC24Q50LG9 513 aa10.51□□□□□ -0.73
RPUSD4-209ENST00000534393 ANKRD44Q8N8A2 993 aa10.51□□□□□ -0.73
RPUSD4-209ENST00000534393 VGLL2Q8N8G2 317 aa10.51□□□□□ -0.73
RPUSD4-209ENST00000534393 OPTNQ96CV9 577 aa10.51□□□□□ -0.73
RPUSD4-209ENST00000534393 ZDHHC15Q96MV8 337 aa10.51□□□□□ -0.73
RPUSD4-209ENST00000534393 USP44Q9H0E7 712 aa10.51□□□□□ -0.73
RPUSD4-209ENST00000534393 TRIM17Q9Y577 477 aa10.51□□□□□ -0.73
RPUSD4-209ENST00000534393 CSADQ9Y600 493 aa10.51□□□□□ -0.73
RPUSD4-209ENST00000534393 RBBP6Q7Z6E9 1792 aaKnown RBP10.5□□□□□ -0.73
RPUSD4-209ENST00000534393 TCP10L2B9ZVM9 353 aa10.5□□□□□ -0.73
RPUSD4-209ENST00000534393 GTF2A2P52657 109 aa10.5□□□□□ -0.73
RPUSD4-209ENST00000534393 SLFN5Q08AF3 891 aa10.5□□□□□ -0.73
RPUSD4-209ENST00000534393 CHAF1AQ13111 956 aaPredicted RBP10.5□□□□□ -0.73
RPUSD4-209ENST00000534393 CRHR2Q13324 411 aa10.5□□□□□ -0.73
RPUSD4-209ENST00000534393 FAM83AQ86UY5 434 aa10.5□□□□□ -0.73
RPUSD4-209ENST00000534393 SSH1Q8WYL5 1049 aa10.5□□□□□ -0.73
RPUSD4-209ENST00000534393 TEPSINQ96N21 525 aa10.5□□□□□ -0.73
RPUSD4-209ENST00000534393 R3HDMLQ9H3Y0 253 aa10.5□□□□□ -0.73
RPUSD4-209ENST00000534393 FBXO3Q9UK99 471 aa10.5□□□□□ -0.73
RPUSD4-209ENST00000534393 EYA2O00167 538 aa10.49□□□□□ -0.73
RPUSD4-209ENST00000534393 CT47B1P0C2W7 299 aaPredicted RBP10.49□□□□□ -0.73
RPUSD4-209ENST00000534393 SLC5A1P13866 664 aa10.49□□□□□ -0.73
RPUSD4-209ENST00000534393 SP3Q02447 781 aa10.49□□□□□ -0.73
RPUSD4-209ENST00000534393 PRPF38BQ5VTL8 546 aaKnown RBP10.49□□□□□ -0.73
RPUSD4-209ENST00000534393 HHIPL2Q6UWX4 724 aa10.49□□□□□ -0.73
RPUSD4-209ENST00000534393 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.49□□□□□ -0.73
RPUSD4-209ENST00000534393 OTOP1Q7RTM1 612 aa10.49□□□□□ -0.73
RPUSD4-209ENST00000534393 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.49□□□□□ -0.73
RPUSD4-209ENST00000534393 WDR66Q8TBY9 1149 aa10.49□□□□□ -0.73
RPUSD4-209ENST00000534393 LPIN2Q92539 896 aa10.49□□□□□ -0.73
RPUSD4-209ENST00000534393 TMEM39BQ9GZU3 492 aa10.49□□□□□ -0.73
RPUSD4-209ENST00000534393 ELP3Q9H9T3 547 aa10.49□□□□□ -0.73
RPUSD4-209ENST00000534393 ZFYVE28Q9HCC9 887 aa10.49□□□□□ -0.73
RPUSD4-209ENST00000534393 IQSEC3Q9UPP2 1182 aaPredicted RBP10.49□□□□□ -0.73
RPUSD4-209ENST00000534393 AOX1Q06278 1338 aa10.49□□□□□ -0.73
RPUSD4-209ENST00000534393 FGFR2P21802 821 aa10.48□□□□□ -0.73
RPUSD4-209ENST00000534393 GJA5P36382 358 aa10.48□□□□□ -0.73
RPUSD4-209ENST00000534393 BCAMP50895 628 aa10.48□□□□□ -0.73
RPUSD4-209ENST00000534393 VGLL4Q14135 290 aa10.48□□□□□ -0.73
RPUSD4-209ENST00000534393 DCAF15Q66K64 600 aa10.48□□□□□ -0.73
RPUSD4-209ENST00000534393 MS4A4AQ96JQ5 239 aa10.48□□□□□ -0.73
RPUSD4-209ENST00000534393 EFCC1Q9HA90 598 aa10.48□□□□□ -0.73
RPUSD4-209ENST00000534393 ZCCHC17Q9NP64 241 aaKnown RBP10.48□□□□□ -0.73
RPUSD4-209ENST00000534393 SMC4Q9NTJ3 1288 aa10.48□□□□□ -0.73
RPUSD4-209ENST00000534393 GNL3LQ9NVN8 582 aaKnown RBP10.48□□□□□ -0.73
RPUSD4-209ENST00000534393 PTPN22Q9Y2R2 807 aa10.48□□□□□ -0.73
RPUSD4-209ENST00000534393 MYH2Q9UKX2 1941 aa10.48□□□□□ -0.73
RPUSD4-209ENST00000534393 CENPFP49454 3210 aa10.48□□□□□ -0.73
RPUSD4-209ENST00000534393 CCL15-CCL14A0A0B4J2E2 113 aa10.47□□□□□ -0.73
RPUSD4-209ENST00000534393 SPDYE5A6NIY4 337 aa10.47□□□□□ -0.73
RPUSD4-209ENST00000534393 CIAO1O76071 339 aa10.47□□□□□ -0.73
RPUSD4-209ENST00000534393 UBTFL1P0CB47 393 aaPredicted RBP10.47□□□□□ -0.73
RPUSD4-209ENST00000534393 CETPP11597 493 aa10.47□□□□□ -0.73
RPUSD4-209ENST00000534393 CCL15Q16663 113 aa10.47□□□□□ -0.73
RPUSD4-209ENST00000534393 ERO1BQ86YB8 467 aa10.47□□□□□ -0.73
RPUSD4-209ENST00000534393 KLHDC4Q8TBB5 520 aa10.47□□□□□ -0.73
RPUSD4-209ENST00000534393 PTPN18Q99952 460 aa10.47□□□□□ -0.73
RPUSD4-209ENST00000534393 PCDH10Q9P2E7 1040 aa10.47□□□□□ -0.73
RPUSD4-209ENST00000534393 RPAP1Q9BWH6 1393 aaPredicted RBP10.47□□□□□ -0.73
RPUSD4-209ENST00000534393 SEMA3EO15041 775 aa10.46□□□□□ -0.73
RPUSD4-209ENST00000534393 CENPBP07199 599 aaPredicted RBP10.46□□□□□ -0.73
RPUSD4-209ENST00000534393 RFX5P48382 616 aaPredicted RBP10.46□□□□□ -0.73
RPUSD4-209ENST00000534393 SNAPC2Q13487 334 aa10.46□□□□□ -0.73
RPUSD4-209ENST00000534393 TAF1CQ15572 869 aaPredicted RBP10.46□□□□□ -0.73
RPUSD4-209ENST00000534393 GRIK5Q16478 980 aa10.46□□□□□ -0.73
RPUSD4-209ENST00000534393 APOBEC3HQ6NTF7 200 aaKnown RBP10.46□□□□□ -0.73
RPUSD4-209ENST00000534393 NBPF11Q86T75 865 aa10.46□□□□□ -0.73
RPUSD4-209ENST00000534393 CD99L2Q8TCZ2 262 aa10.46□□□□□ -0.73
RPUSD4-209ENST00000534393 BRI3BPQ8WY22 251 aa10.46□□□□□ -0.73
RPUSD4-209ENST00000534393 OTUD5Q96G74 571 aa10.46□□□□□ -0.73
RPUSD4-209ENST00000534393 WRNIP1Q96S55 665 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms