RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.76■■□□□ 1.23
UBXN1-216ENST00000533908 VGLL2Q8N8G2 317 aa22.76■■□□□ 1.23
UBXN1-216ENST00000533908 KLHDC4Q8TBB5 520 aa22.76■■□□□ 1.23
UBXN1-216ENST00000533908 CNKSR2Q8WXI2 1034 aa22.76■■□□□ 1.23
UBXN1-216ENST00000533908 ELP3Q9H9T3 547 aa22.76■■□□□ 1.23
UBXN1-216ENST00000533908 MROH5Q6ZUA9 1318 aa22.76■■□□□ 1.23
UBXN1-216ENST00000533908 TESPA1A2RU30 521 aaPredicted RBP22.75■■□□□ 1.23
UBXN1-216ENST00000533908 CRHR2Q13324 411 aa22.75■■□□□ 1.23
UBXN1-216ENST00000533908 OTOP1Q7RTM1 612 aa22.75■■□□□ 1.23
UBXN1-216ENST00000533908 TMEM39BQ9GZU3 492 aa22.75■■□□□ 1.23
UBXN1-216ENST00000533908 TRIM17Q9Y577 477 aa22.75■■□□□ 1.23
UBXN1-216ENST00000533908 MS4A4AQ96JQ5 239 aa22.74■■□□□ 1.23
UBXN1-216ENST00000533908 CHAF1AQ13111 956 aaPredicted RBP22.73■■□□□ 1.23
UBXN1-216ENST00000533908 TNFAIP1Q13829 316 aa22.73■■□□□ 1.23
UBXN1-216ENST00000533908 OPTNQ96CV9 577 aa22.73■■□□□ 1.23
UBXN1-216ENST00000533908 USP44Q9H0E7 712 aa22.73■■□□□ 1.23
UBXN1-216ENST00000533908 OTOFQ9HC10 1997 aa22.72■■□□□ 1.23
UBXN1-216ENST00000533908 PDE8BO95263 885 aa22.72■■□□□ 1.23
UBXN1-216ENST00000533908 BCAMP50895 628 aa22.72■■□□□ 1.23
UBXN1-216ENST00000533908 METTL24Q5JXM2 366 aa22.72■■□□□ 1.23
UBXN1-216ENST00000533908 SSH1Q8WYL5 1049 aa22.72■■□□□ 1.23
UBXN1-216ENST00000533908 CACNB3P54284 484 aa22.71■■□□□ 1.23
UBXN1-216ENST00000533908 CD99L2Q8TCZ2 262 aa22.71■■□□□ 1.23
UBXN1-216ENST00000533908 ARAP2Q8WZ64 1704 aa22.71■■□□□ 1.23
UBXN1-216ENST00000533908 HDLBPQ00341 1268 aaKnown RBP22.7■■□□□ 1.22
UBXN1-216ENST00000533908 VGLL4Q14135 290 aa22.7■■□□□ 1.22
UBXN1-216ENST00000533908 PRPF38BQ5VTL8 546 aaKnown RBP22.7■■□□□ 1.22
UBXN1-216ENST00000533908 VPS37DQ86XT2 251 aa22.7■■□□□ 1.22
UBXN1-216ENST00000533908 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.7■■□□□ 1.224e-9■□□□□ 9
UBXN1-216ENST00000533908 BRI3BPQ8WY22 251 aa22.7■■□□□ 1.22
UBXN1-216ENST00000533908 FGFR2P21802 821 aa22.69■■□□□ 1.22
UBXN1-216ENST00000533908 ZEB1P37275 1124 aaPredicted RBP22.69■■□□□ 1.22
UBXN1-216ENST00000533908 MAP3K9P80192 1104 aa22.69■■□□□ 1.22
UBXN1-216ENST00000533908 CAVIN4Q5BKX8 364 aa22.69■■□□□ 1.22
UBXN1-216ENST00000533908 OTUD7BQ6GQQ9 843 aa22.69■■□□□ 1.22
UBXN1-216ENST00000533908 PTPN22Q9Y2R2 807 aa22.69■■□□□ 1.22
UBXN1-216ENST00000533908 HTTP42858 3142 aa22.68■■□□□ 1.22
UBXN1-216ENST00000533908 PTPRCP08575 1304 aa22.68■■□□□ 1.22
UBXN1-216ENST00000533908 POTEFA5A3E0 1075 aa22.68■■□□□ 1.22
UBXN1-216ENST00000533908 RFX5P48382 616 aaPredicted RBP22.68■■□□□ 1.22
UBXN1-216ENST00000533908 APOBEC3HQ6NTF7 200 aaKnown RBP22.68■■□□□ 1.22
UBXN1-216ENST00000533908 ERO1AQ96HE7 468 aa22.68■■□□□ 1.22
UBXN1-216ENST00000533908 FRAT2O75474 233 aaPredicted RBP22.67■■□□□ 1.22
UBXN1-216ENST00000533908 TNNI2P48788 182 aa22.67■■□□□ 1.22
UBXN1-216ENST00000533908 SP3Q02447 781 aa22.67■■□□□ 1.22
UBXN1-216ENST00000533908 TBC1D22AQ8WUA7 517 aa22.67■■□□□ 1.22
UBXN1-216ENST00000533908 TEKT1Q969V4 418 aa22.67■■□□□ 1.22
UBXN1-216ENST00000533908 ZDHHC15Q96MV8 337 aa22.67■■□□□ 1.22
UBXN1-216ENST00000533908 MRIQ9BWK5 157 aa22.67■■□□□ 1.22
UBXN1-216ENST00000533908 SLFN5Q08AF3 891 aa22.66■■□□□ 1.22
UBXN1-216ENST00000533908 CCL15-CCL14A0A0B4J2E2 113 aa22.65■■□□□ 1.22
UBXN1-216ENST00000533908 CCL15Q16663 113 aa22.65■■□□□ 1.22
UBXN1-216ENST00000533908 FAM43AQ8N2R8 423 aa22.65■■□□□ 1.22
UBXN1-216ENST00000533908 OTUD5Q96G74 571 aa22.65■■□□□ 1.22
UBXN1-216ENST00000533908 EFCC1Q9HA90 598 aa22.65■■□□□ 1.22
UBXN1-216ENST00000533908 ATG9AQ7Z3C6 839 aa22.64■■□□□ 1.21
UBXN1-216ENST00000533908 CDCA7LQ96GN5 454 aa22.64■■□□□ 1.21
UBXN1-216ENST00000533908 SNCAIPQ9Y6H5 919 aa22.64■■□□□ 1.21
UBXN1-216ENST00000533908 E9PSI1 815 aa22.63■■□□□ 1.21
UBXN1-216ENST00000533908 EYA2O00167 538 aa22.63■■□□□ 1.21
UBXN1-216ENST00000533908 GTF2A2P52657 109 aa22.63■■□□□ 1.21
UBXN1-216ENST00000533908 PUM3Q15397 648 aaKnown RBP22.63■■□□□ 1.21
UBXN1-216ENST00000533908 ZKSCAN4Q969J2 545 aaPredicted RBP22.63■■□□□ 1.21
UBXN1-216ENST00000533908 CSADQ9Y600 493 aa22.63■■□□□ 1.21
UBXN1-216ENST00000533908 SPDYE5A6NIY4 337 aa22.62■■□□□ 1.21
UBXN1-216ENST00000533908 IFIT1P09914 478 aaKnown RBP22.62■■□□□ 1.21
UBXN1-216ENST00000533908 INTS3Q68E01 1043 aaKnown RBP22.62■■□□□ 1.21
UBXN1-216ENST00000533908 HHIPL2Q6UWX4 724 aa22.62■■□□□ 1.21
UBXN1-216ENST00000533908 FAM83AQ86UY5 434 aa22.62■■□□□ 1.21
UBXN1-216ENST00000533908 ARMC5Q96C12 935 aa22.62■■□□□ 1.21
UBXN1-216ENST00000533908 KIF16BQ96L93 1317 aa22.61■■□□□ 1.21
UBXN1-216ENST00000533908 TAF1CQ15572 869 aaPredicted RBP22.61■■□□□ 1.21
UBXN1-216ENST00000533908 FKBP1CQ5VVH2 108 aa22.61■■□□□ 1.21
UBXN1-216ENST00000533908 SUGT1Q9Y2Z0 365 aa22.61■■□□□ 1.21
UBXN1-216ENST00000533908 MIGA2Q7L4E1 593 aa22.6■■□□□ 1.21
UBXN1-216ENST00000533908 WRNIP1Q96S55 665 aa22.6■■□□□ 1.21
UBXN1-216ENST00000533908 ZFYVE28Q9HCC9 887 aa22.6■■□□□ 1.21
UBXN1-216ENST00000533908 IRF6O14896 467 aa22.59■■□□□ 1.21
UBXN1-216ENST00000533908 EN2P19622 333 aaPredicted RBP22.59■■□□□ 1.21
UBXN1-216ENST00000533908 ERO1BQ86YB8 467 aa22.59■■□□□ 1.21
UBXN1-216ENST00000533908 LPIN2Q92539 896 aa22.59■■□□□ 1.21
UBXN1-216ENST00000533908 BTBD19C9JJ37 291 aa22.58■■□□□ 1.21
UBXN1-216ENST00000533908 SLC5A1P13866 664 aa22.58■■□□□ 1.21
UBXN1-216ENST00000533908 ALDH1L2Q3SY69 923 aa22.58■■□□□ 1.21
UBXN1-216ENST00000533908 TRMT2AQ8IZ69 625 aaKnown RBP22.58■■□□□ 1.21
UBXN1-216ENST00000533908 TMOD2Q9NZR1 351 aa22.58■■□□□ 1.21
UBXN1-216ENST00000533908 MAST3O60307 1309 aa22.57■■□□□ 1.2
UBXN1-216ENST00000533908 KIAA0100Q14667 2235 aaKnown RBP22.57■■□□□ 1.2
UBXN1-216ENST00000533908 INPP5BP32019 993 aa22.57■■□□□ 1.2
UBXN1-216ENST00000533908 DIXDC1Q155Q3 683 aa22.57■■□□□ 1.2
UBXN1-216ENST00000533908 CDC42EP5Q6NZY7 148 aa22.57■■□□□ 1.2
UBXN1-216ENST00000533908 WDR66Q8TBY9 1149 aa22.57■■□□□ 1.2
UBXN1-216ENST00000533908 ARHGAP39Q9C0H5 1083 aa22.57■■□□□ 1.2
UBXN1-216ENST00000533908 SIL1Q9H173 461 aa22.57■■□□□ 1.2
UBXN1-216ENST00000533908 DAGLAQ9Y4D2 1042 aa22.57■■□□□ 1.2
UBXN1-216ENST00000533908 PTCH2Q9Y6C5 1203 aa22.57■■□□□ 1.2
UBXN1-216ENST00000533908 CENPFP49454 3210 aa22.57■■□□□ 1.2
UBXN1-216ENST00000533908 CETPP11597 493 aa22.56■■□□□ 1.2
UBXN1-216ENST00000533908 FAM151AQ8WW52 585 aa22.56■■□□□ 1.2
UBXN1-216ENST00000533908 SMC4Q9NTJ3 1288 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms