RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 HELBQ8NG08 1087 aaPredicted RBP7.77□□□□□ -1.17
ATPAF1-209ENST00000529214 KLHDC4Q8TBB5 520 aa7.77□□□□□ -1.17
ATPAF1-209ENST00000529214 ZBTB40Q9NUA8 1239 aa7.77□□□□□ -1.17
ATPAF1-209ENST00000529214 DDX19BQ9UMR2 479 aa7.77□□□□□ -1.17
ATPAF1-209ENST00000529214 SBF1O95248 1867 aa7.77□□□□□ -1.17
ATPAF1-209ENST00000529214 MYH3P11055 1940 aa7.77□□□□□ -1.17
ATPAF1-209ENST00000529214 PNMA6EA0A0J9YXQ4 647 aa7.76□□□□□ -1.17
ATPAF1-209ENST00000529214 EYA2O00167 538 aa7.76□□□□□ -1.17
ATPAF1-209ENST00000529214 SRGAP3O43295 1099 aa7.76□□□□□ -1.17
ATPAF1-209ENST00000529214 RRP1P56182 461 aaKnown RBP7.76□□□□□ -1.17
ATPAF1-209ENST00000529214 NIM1KQ8IY84 436 aa7.76□□□□□ -1.17
ATPAF1-209ENST00000529214 SECISBP2LQ93073 1101 aaKnown RBP7.76□□□□□ -1.17
ATPAF1-209ENST00000529214 GPR101Q96P66 508 aaPredicted RBP7.76□□□□□ -1.17
ATPAF1-209ENST00000529214 CHMP4BQ9H444 224 aaKnown RBP7.76□□□□□ -1.17
ATPAF1-209ENST00000529214 COPRSQ9NQ92 184 aa7.76□□□□□ -1.17
ATPAF1-209ENST00000529214 ZNRF3Q9ULT6 936 aa7.76□□□□□ -1.17
ATPAF1-209ENST00000529214 ZNF804BA4D1E1 1349 aa7.76□□□□□ -1.17
ATPAF1-209ENST00000529214 FAM205CA6NFA0 338 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 SNAP23O00161 211 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 DPYSL4O14531 572 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 CIAO1O76071 339 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 DDNO94850 711 aaPredicted RBP7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 PDE8BO95263 885 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 PTMSP20962 102 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 EIF6P56537 245 aaKnown RBP7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 CXCL9Q07325 125 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 UBE4AQ14139 1066 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 C15orf52Q6ZUT6 534 aaKnown RBP7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 ATG9AQ7Z3C6 839 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 TXNRD3Q86VQ6 643 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 OXER1Q8TDS5 423 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 SSH3Q8TE77 659 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 CALR3Q96L12 384 aaKnown RBP7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 CWC22Q9HCG8 908 aaKnown RBP7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 PA2G4Q9UQ80 394 aaKnown RBP7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 MROH5Q6ZUA9 1318 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 LRRC37AA6NMS7 1700 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 DUOX1Q9NRD9 1551 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 POTEB3A0JP26 581 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 YDJCA8MPS7 323 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 POTECB2RU33 542 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 IL15P40933 162 aaPredicted RBP7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 KCNJ4P48050 445 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 SKIV2LQ15477 1246 aaKnown RBP7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 DOK7Q18PE1 504 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 METTL24Q5JXM2 366 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 POTEBQ6S5H4 581 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 PODNQ7Z5L7 613 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 RPAP2Q8IXW5 612 aaPredicted RBP7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 GPC2Q8N158 579 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 VGLL2Q8N8G2 317 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 ZNF526Q8TF50 670 aaPredicted RBP7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 DBNDD1Q9H9R9 158 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 RRAGCQ9HB90 399 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 KCNQ5Q9NR82 932 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 IVNS1ABPQ9Y6Y0 642 aa7.75□□□□□ -1.17
ATPAF1-209ENST00000529214 KDM2BQ8NHM5 1336 aa7.74□□□□□ -1.17
ATPAF1-209ENST00000529214 IRS2Q9Y4H2 1338 aa7.74□□□□□ -1.17
ATPAF1-209ENST00000529214 CCDC88AQ3V6T2 1871 aa7.74□□□□□ -1.17
ATPAF1-209ENST00000529214 COL4A5P29400 1685 aa7.74□□□□□ -1.17
ATPAF1-209ENST00000529214 UNCXA6NJT0 531 aa7.74□□□□□ -1.17
ATPAF1-209ENST00000529214 G3V3G9 751 aa7.74□□□□□ -1.17
ATPAF1-209ENST00000529214 ECE2O60344 883 aa7.74□□□□□ -1.17
ATPAF1-209ENST00000529214 TNIP1Q15025 636 aa7.74□□□□□ -1.17
ATPAF1-209ENST00000529214 CEP85Q6P2H3 762 aa7.74□□□□□ -1.17
ATPAF1-209ENST00000529214 PBXIP1Q96AQ6 731 aa7.74□□□□□ -1.17
ATPAF1-209ENST00000529214 COA1Q9GZY4 146 aa7.74□□□□□ -1.17
ATPAF1-209ENST00000529214 SIL1Q9H173 461 aa7.74□□□□□ -1.17
ATPAF1-209ENST00000529214 IGSF5Q9NSI5 407 aa7.74□□□□□ -1.17
ATPAF1-209ENST00000529214 CEP126Q9P2H0 1117 aa7.74□□□□□ -1.17
ATPAF1-209ENST00000529214 SUPT16HQ9Y5B9 1047 aaKnown RBP7.74□□□□□ -1.17
ATPAF1-209ENST00000529214 ZNF541Q9H0D2 1346 aa7.74□□□□□ -1.17
ATPAF1-209ENST00000529214 MED23Q9ULK4 1368 aa7.73□□□□□ -1.17
ATPAF1-209ENST00000529214 LTBP1Q14766 1721 aa7.73□□□□□ -1.17
ATPAF1-209ENST00000529214 DICER1Q9UPY3 1922 aaKnown RBP7.73□□□□□ -1.17
ATPAF1-209ENST00000529214 RAD17O75943 681 aa7.73□□□□□ -1.17
ATPAF1-209ENST00000529214 VIL1P09327 827 aaKnown RBP7.73□□□□□ -1.17
ATPAF1-209ENST00000529214 VEGFAP15692 232 aaPredicted RBP7.73□□□□□ -1.17
ATPAF1-209ENST00000529214 FGFR2P21802 821 aa7.73□□□□□ -1.17
ATPAF1-209ENST00000529214 KLRK1P26718 216 aa7.73□□□□□ -1.17
ATPAF1-209ENST00000529214 SETQ01105 290 aaPredicted RBP7.73□□□□□ -1.17
ATPAF1-209ENST00000529214 G3BP1Q13283 466 aaKnown RBP eCLIP7.73□□□□□ -1.17
ATPAF1-209ENST00000529214 CIAPIN1Q6FI81 312 aa7.73□□□□□ -1.17
ATPAF1-209ENST00000529214 SIRT2Q8IXJ6 389 aa7.73□□□□□ -1.17
ATPAF1-209ENST00000529214 L3MBTL3Q96JM7 780 aaPredicted RBP7.73□□□□□ -1.17
ATPAF1-209ENST00000529214 FAM84BQ96KN1 310 aaPredicted RBP7.73□□□□□ -1.17
ATPAF1-209ENST00000529214 PRDM16Q9HAZ2 1276 aa7.73□□□□□ -1.17
ATPAF1-209ENST00000529214 CD209Q9NNX6 404 aa7.73□□□□□ -1.17
ATPAF1-209ENST00000529214 NMRK2Q9NPI5 230 aa7.73□□□□□ -1.17
ATPAF1-209ENST00000529214 NOP58Q9Y2X3 529 aaKnown RBP7.73□□□□□ -1.17
ATPAF1-209ENST00000529214 GJA3Q9Y6H8 435 aa7.73□□□□□ -1.17
ATPAF1-209ENST00000529214 PSMD14O00487 310 aa7.72□□□□□ -1.17
ATPAF1-209ENST00000529214 KIF3CO14782 793 aa7.72□□□□□ -1.17
ATPAF1-209ENST00000529214 SURF6O75683 361 aaKnown RBP7.72□□□□□ -1.17
ATPAF1-209ENST00000529214 SASH1O94885 1247 aa7.72□□□□□ -1.17
ATPAF1-209ENST00000529214 IL1R1P14778 569 aa7.72□□□□□ -1.17
ATPAF1-209ENST00000529214 HIBADHP31937 336 aaKnown RBP7.72□□□□□ -1.17
ATPAF1-209ENST00000529214 HIC1Q14526 733 aa7.72□□□□□ -1.17
ATPAF1-209ENST00000529214 FBXO33Q7Z6M2 555 aa7.72□□□□□ -1.17
ATPAF1-209ENST00000529214 LPIN2Q92539 896 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms