RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 RBM17Q96I25 401 aaKnown RBP10.77□□□□□ -0.69
USP48-212ENST00000527823 RTFDC1Q9BY42 306 aaPredicted RBP10.77□□□□□ -0.69
USP48-212ENST00000527823 ATP6V0A2Q9Y487 856 aa10.77□□□□□ -0.69
USP48-212ENST00000527823 YDJCA8MPS7 323 aa10.76□□□□□ -0.69
USP48-212ENST00000527823 ERVV-1B6SEH8 477 aa10.76□□□□□ -0.69
USP48-212ENST00000527823 RAD17O75943 681 aa10.76□□□□□ -0.69
USP48-212ENST00000527823 KIAA2012Q0VF49 1180 aa10.76□□□□□ -0.69
USP48-212ENST00000527823 MSS51Q4VC12 460 aa10.76□□□□□ -0.69
USP48-212ENST00000527823 CDC37L1Q7L3B6 337 aa10.76□□□□□ -0.69
USP48-212ENST00000527823 SLC6A16Q9GZN6 736 aa10.76□□□□□ -0.69
USP48-212ENST00000527823 LAMB1P07942 1786 aa10.75□□□□□ -0.69
USP48-212ENST00000527823 ADM5C9JUS6 153 aa10.75□□□□□ -0.69
USP48-212ENST00000527823 S1PR4O95977 384 aa10.75□□□□□ -0.69
USP48-212ENST00000527823 EGFRP00533 1210 aa10.75□□□□□ -0.69
USP48-212ENST00000527823 RGMBQ6NW40 437 aa10.75□□□□□ -0.69
USP48-212ENST00000527823 NGEFQ8N5V2 710 aa10.75□□□□□ -0.69
USP48-212ENST00000527823 VPS33BQ9H267 617 aa10.75□□□□□ -0.69
USP48-212ENST00000527823 CLSPNQ9HAW4 1339 aa10.75□□□□□ -0.69
USP48-212ENST00000527823 USP17L8P0C7I0 530 aa10.74□□□□□ -0.69
USP48-212ENST00000527823 JUNDP17535 347 aa10.74□□□□□ -0.69
USP48-212ENST00000527823 KIF23Q02241 960 aaPredicted RBP10.74□□□□□ -0.69
USP48-212ENST00000527823 KIF6Q6ZMV9 814 aa10.74□□□□□ -0.69
USP48-212ENST00000527823 USP48Q86UV5 1035 aa10.74□□□□□ -0.69
USP48-212ENST00000527823 ZNF34Q8IZ26 560 aa10.74□□□□□ -0.69
USP48-212ENST00000527823 BCL2L13Q9BXK5 485 aa10.74□□□□□ -0.69
USP48-212ENST00000527823 GBA2Q9HCG7 927 aaPredicted RBP10.74□□□□□ -0.69
USP48-212ENST00000527823 SNRKQ9NRH2 765 aa10.74□□□□□ -0.69
USP48-212ENST00000527823 RNF186Q9NXI6 227 aa10.74□□□□□ -0.69
USP48-212ENST00000527823 DESI1Q6ICB0 168 aa10.73□□□□□ -0.69
USP48-212ENST00000527823 DPP8Q6V1X1 898 aaPredicted RBP10.73□□□□□ -0.69
USP48-212ENST00000527823 CTU1Q7Z7A3 348 aaKnown RBP10.73□□□□□ -0.69
USP48-212ENST00000527823 SUPT20HQ8NEM7 779 aa10.73□□□□□ -0.69
USP48-212ENST00000527823 LRRN4Q8WUT4 740 aa10.73□□□□□ -0.69
USP48-212ENST00000527823 RTF1Q92541 710 aaKnown RBP10.73□□□□□ -0.69
USP48-212ENST00000527823 MIS18AQ9NYP9 233 aa10.73□□□□□ -0.69
USP48-212ENST00000527823 CNOT7Q9UIV1 285 aaKnown RBP10.73□□□□□ -0.69
USP48-212ENST00000527823 RTL9Q8NET4 1388 aa10.73□□□□□ -0.69
USP48-212ENST00000527823 TRPA1O75762 1119 aa10.72□□□□□ -0.69
USP48-212ENST00000527823 DXOO77932 396 aaKnown RBP10.72□□□□□ -0.69
USP48-212ENST00000527823 MYL6BP14649 208 aa10.72□□□□□ -0.69
USP48-212ENST00000527823 MMP16P51512 607 aa10.72□□□□□ -0.69
USP48-212ENST00000527823 CNGB1Q14028 1251 aaPredicted RBP10.72□□□□□ -0.69
USP48-212ENST00000527823 KRT26Q7Z3Y9 468 aa10.72□□□□□ -0.69
USP48-212ENST00000527823 LRP10Q7Z4F1 713 aa10.72□□□□□ -0.69
USP48-212ENST00000527823 BANK1Q8NDB2 785 aa10.72□□□□□ -0.69
USP48-212ENST00000527823 ASTN2O75129 1339 aaPredicted RBP10.71□□□□□ -0.69
USP48-212ENST00000527823 TNIP1Q15025 636 aa10.71□□□□□ -0.69
USP48-212ENST00000527823 TBC1D10BQ4KMP7 808 aaPredicted RBP10.71□□□□□ -0.69
USP48-212ENST00000527823 LYPD8Q6UX82 237 aa10.71□□□□□ -0.69
USP48-212ENST00000527823 RASAL3Q86YV0 1011 aa10.71□□□□□ -0.69
USP48-212ENST00000527823 MPNDQ8N594 471 aa10.71□□□□□ -0.69
USP48-212ENST00000527823 RRP7AQ9Y3A4 280 aaKnown RBP10.71□□□□□ -0.69
USP48-212ENST00000527823 SZT2Q5T011 3432 aa10.7□□□□□ -0.7
USP48-212ENST00000527823 ZNF609O15014 1411 aa10.7□□□□□ -0.7
USP48-212ENST00000527823 PSMD14O00487 310 aa10.7□□□□□ -0.7
USP48-212ENST00000527823 ZNF157P51786 506 aaPredicted RBP10.7□□□□□ -0.7
USP48-212ENST00000527823 EIF4A1P60842 406 aaKnown RBP10.7□□□□□ -0.7
USP48-212ENST00000527823 TAF7Q15545 349 aaPredicted RBP10.7□□□□□ -0.7
USP48-212ENST00000527823 PARP10Q53GL7 1025 aa10.7□□□□□ -0.7
USP48-212ENST00000527823 NLRP3Q96P20 1036 aa10.7□□□□□ -0.7
USP48-212ENST00000527823 CSRNP1Q96S65 589 aa10.7□□□□□ -0.7
USP48-212ENST00000527823 HMX1Q9NP08 348 aaPredicted RBP10.7□□□□□ -0.7
USP48-212ENST00000527823 GGA3Q9NZ52 723 aa10.7□□□□□ -0.7
USP48-212ENST00000527823 PLA2G2EQ9NZK7 142 aa10.7□□□□□ -0.7
USP48-212ENST00000527823 ERBB4Q15303 1308 aa10.69□□□□□ -0.7
USP48-212ENST00000527823 H7C1D1 291 aa10.69□□□□□ -0.7
USP48-212ENST00000527823 HTATSF1O43719 755 aaKnown RBP10.69□□□□□ -0.7
USP48-212ENST00000527823 U2AF1L5P0DN76 240 aaPredicted RBP10.69□□□□□ -0.7
USP48-212ENST00000527823 U2AF1Q01081 240 aaKnown RBP eCLIP10.69□□□□□ -0.73e-7■■■□□ 15.3
USP48-212ENST00000527823 GRAPQ13588 217 aa10.69□□□□□ -0.7
USP48-212ENST00000527823 MCM6Q14566 821 aa10.69□□□□□ -0.7
USP48-212ENST00000527823 SLC10A5Q5PT55 438 aa10.69□□□□□ -0.7
USP48-212ENST00000527823 PPP1R42Q7Z4L9 355 aa10.69□□□□□ -0.7
USP48-212ENST00000527823 SP8Q8IXZ3 490 aa10.69□□□□□ -0.7
USP48-212ENST00000527823 GRAPLQ8TC17 118 aaPredicted RBP10.69□□□□□ -0.7
USP48-212ENST00000527823 TMX4Q9H1E5 349 aaPredicted RBP10.69□□□□□ -0.7
USP48-212ENST00000527823 DBNDD1Q9H9R9 158 aa10.69□□□□□ -0.7
USP48-212ENST00000527823 SPEF2Q9C093 1822 aa10.69□□□□□ -0.7
USP48-212ENST00000527823 HCLS1P14317 486 aaPredicted RBP10.68□□□□□ -0.7
USP48-212ENST00000527823 FLIIQ13045 1269 aa10.68□□□□□ -0.7
USP48-212ENST00000527823 PROSER3Q2NL68 480 aa10.68□□□□□ -0.7
USP48-212ENST00000527823 KIF4BQ2VIQ3 1234 aa10.68□□□□□ -0.7
USP48-212ENST00000527823 PPP1R18Q6NYC8 613 aa10.68□□□□□ -0.7
USP48-212ENST00000527823 C2orf69Q8N8R5 385 aa10.68□□□□□ -0.7
USP48-212ENST00000527823 MTMR14Q8NCE2 650 aa10.68□□□□□ -0.7
USP48-212ENST00000527823 DPF2Q92785 391 aa10.68□□□□□ -0.7
USP48-212ENST00000527823 CDCA5Q96FF9 252 aa10.68□□□□□ -0.7
USP48-212ENST00000527823 NUDT12Q9BQG2 462 aa10.68□□□□□ -0.7
USP48-212ENST00000527823 THUMPD2Q9BTF0 503 aaKnown RBP10.68□□□□□ -0.7
USP48-212ENST00000527823 UTP14AQ9BVJ6 771 aaKnown RBP10.68□□□□□ -0.7
USP48-212ENST00000527823 KIAA0100Q14667 2235 aaKnown RBP10.68□□□□□ -0.7
USP48-212ENST00000527823 BBOX1O75936 387 aa10.67□□□□□ -0.7
USP48-212ENST00000527823 PTPRNQ16849 979 aa10.67□□□□□ -0.7
USP48-212ENST00000527823 CFAP53Q96M91 514 aa10.67□□□□□ -0.7
USP48-212ENST00000527823 CEP290O15078 2479 aa10.66□□□□□ -0.7
USP48-212ENST00000527823 RNF223E7ERA6 249 aa10.66□□□□□ -0.7
USP48-212ENST00000527823 ECE2O60344 883 aa10.66□□□□□ -0.7
USP48-212ENST00000527823 ANXA1P04083 346 aa10.66□□□□□ -0.7
USP48-212ENST00000527823 RPS12P25398 132 aaKnown RBP10.66□□□□□ -0.7
USP48-212ENST00000527823 NLRP10Q86W26 655 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms