RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 ELP3Q9H9T3 547 aa13.85□□□□□ -0.19
NEDD8-204ENST00000526430 TTC28Q96AY4 2481 aa13.84□□□□□ -0.19
NEDD8-204ENST00000526430 PCCAP05165 728 aaPredicted RBP13.84□□□□□ -0.19
NEDD8-204ENST00000526430 CCL5P13501 91 aa13.84□□□□□ -0.19
NEDD8-204ENST00000526430 GRK4P32298 578 aa13.84□□□□□ -0.19
NEDD8-204ENST00000526430 FLIIQ13045 1269 aa13.84□□□□□ -0.19
NEDD8-204ENST00000526430 HELBQ8NG08 1087 aaPredicted RBP13.84□□□□□ -0.19
NEDD8-204ENST00000526430 CDC5LQ99459 802 aaKnown RBP13.84□□□□□ -0.19
NEDD8-204ENST00000526430 GDF15Q99988 308 aa13.84□□□□□ -0.19
NEDD8-204ENST00000526430 BSDC1Q9NW68 430 aaPredicted RBP13.84□□□□□ -0.19
NEDD8-204ENST00000526430 STAP2Q9UGK3 403 aa13.84□□□□□ -0.19
NEDD8-204ENST00000526430 SRRDQ9UH36 339 aa13.84□□□□□ -0.19
NEDD8-204ENST00000526430 MINPP1Q9UNW1 487 aa13.84□□□□□ -0.19
NEDD8-204ENST00000526430 SPDYE2BA6NHP3 402 aa13.83□□□□□ -0.2
NEDD8-204ENST00000526430 SPDYE6P0CI01 402 aa13.83□□□□□ -0.2
NEDD8-204ENST00000526430 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.83□□□□□ -0.2
NEDD8-204ENST00000526430 Q7L0L9 218 aa13.83□□□□□ -0.2
NEDD8-204ENST00000526430 TXNRD3Q86VQ6 643 aa13.83□□□□□ -0.2
NEDD8-204ENST00000526430 U2AF1L4Q8WU68 220 aaKnown RBP13.83□□□□□ -0.2
NEDD8-204ENST00000526430 RNF208Q9H0X6 261 aa13.83□□□□□ -0.2
NEDD8-204ENST00000526430 PRDM6Q9NQX0 595 aa13.83□□□□□ -0.2
NEDD8-204ENST00000526430 LEMD3Q9Y2U8 911 aa13.83□□□□□ -0.2
NEDD8-204ENST00000526430 RIPOR2Q9Y4F9 1068 aa13.83□□□□□ -0.2
NEDD8-204ENST00000526430 DOCK3Q8IZD9 2030 aa13.83□□□□□ -0.2
NEDD8-204ENST00000526430 PI4KAP2A4QPH2 592 aa13.82□□□□□ -0.2
NEDD8-204ENST00000526430 GTF2IP78347 998 aa13.82□□□□□ -0.2
NEDD8-204ENST00000526430 KSR2Q6VAB6 950 aa13.82□□□□□ -0.2
NEDD8-204ENST00000526430 PI4KAP1Q8N8J0 262 aa13.82□□□□□ -0.2
NEDD8-204ENST00000526430 CCDC191Q8NCU4 936 aa13.82□□□□□ -0.2
NEDD8-204ENST00000526430 STK31Q9BXU1 1019 aa13.82□□□□□ -0.2
NEDD8-204ENST00000526430 CHMP4AQ9BY43 222 aa13.82□□□□□ -0.2
NEDD8-204ENST00000526430 EYSQ5T1H1 3165 aa13.82□□□□□ -0.2
NEDD8-204ENST00000526430 LAMA2P24043 3122 aaKnown RBP13.81□□□□□ -0.2
NEDD8-204ENST00000526430 CETPP11597 493 aa13.81□□□□□ -0.2
NEDD8-204ENST00000526430 HOXD10P28358 340 aa13.81□□□□□ -0.2
NEDD8-204ENST00000526430 UBXN2AP68543 259 aa13.81□□□□□ -0.2
NEDD8-204ENST00000526430 TNFAIP1Q13829 316 aa13.81□□□□□ -0.2
NEDD8-204ENST00000526430 VGLL4Q14135 290 aa13.81□□□□□ -0.2
NEDD8-204ENST00000526430 RASA3Q14644 834 aa13.81□□□□□ -0.2
NEDD8-204ENST00000526430 RAET1EQ8TD07 263 aa13.81□□□□□ -0.2
NEDD8-204ENST00000526430 CNKSR2Q8WXI2 1034 aa13.81□□□□□ -0.2
NEDD8-204ENST00000526430 TRIM47Q96LD4 638 aa13.81□□□□□ -0.2
NEDD8-204ENST00000526430 NOB1Q9ULX3 412 aaKnown RBP13.81□□□□□ -0.2
NEDD8-204ENST00000526430 TNNQ9UQP3 1299 aa13.81□□□□□ -0.2
NEDD8-204ENST00000526430 CLRN2A0PK11 232 aa13.8□□□□□ -0.2
NEDD8-204ENST00000526430 F6X3S4 739 aa13.8□□□□□ -0.2
NEDD8-204ENST00000526430 SGPL1O95470 568 aa13.8□□□□□ -0.2
NEDD8-204ENST00000526430 IGKV5-2P06315 115 aa13.8□□□□□ -0.2
NEDD8-204ENST00000526430 OSBPP22059 807 aa13.8□□□□□ -0.2
NEDD8-204ENST00000526430 CTGFP29279 349 aa13.8□□□□□ -0.2
NEDD8-204ENST00000526430 CFAP100Q494V2 611 aa13.8□□□□□ -0.2
NEDD8-204ENST00000526430 C17orf99Q6UX52 265 aa13.8□□□□□ -0.2
NEDD8-204ENST00000526430 CERS5Q8N5B7 392 aa13.8□□□□□ -0.2
NEDD8-204ENST00000526430 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.8□□□□□ -0.26e-11■■□□□ 13.6
NEDD8-204ENST00000526430 PRMT6Q96LA8 375 aaPredicted RBP13.8□□□□□ -0.2
NEDD8-204ENST00000526430 CCDC85AQ96PX6 553 aaPredicted RBP13.8□□□□□ -0.2
NEDD8-204ENST00000526430 METTL22Q9BUU2 404 aaPredicted RBP13.8□□□□□ -0.2
NEDD8-204ENST00000526430 VEZTQ9HBM0 779 aa13.8□□□□□ -0.2
NEDD8-204ENST00000526430 MAP3K2Q9Y2U5 619 aa13.8□□□□□ -0.2
NEDD8-204ENST00000526430 PRUNE2Q8WUY3 3088 aa13.79□□□□□ -0.2
NEDD8-204ENST00000526430 SPDYE5A6NIY4 337 aa13.79□□□□□ -0.2
NEDD8-204ENST00000526430 BTBD19C9JJ37 291 aa13.79□□□□□ -0.2
NEDD8-204ENST00000526430 PSMC4P43686 418 aa13.79□□□□□ -0.2
NEDD8-204ENST00000526430 CTSWP56202 376 aa13.79□□□□□ -0.2
NEDD8-204ENST00000526430 FKBP1AP62942 108 aaKnown RBP13.79□□□□□ -0.2
NEDD8-204ENST00000526430 SMC4Q9NTJ3 1288 aa13.79□□□□□ -0.2
NEDD8-204ENST00000526430 PCDHAC2Q9Y5I4 1007 aa13.79□□□□□ -0.2
NEDD8-204ENST00000526430 CSADQ9Y600 493 aa13.79□□□□□ -0.2
NEDD8-204ENST00000526430 MYPNQ86TC9 1320 aa13.79□□□□□ -0.2
NEDD8-204ENST00000526430 MAP3K9P80192 1104 aa13.78□□□□□ -0.2
NEDD8-204ENST00000526430 RIC3Q7Z5B4 369 aa13.78□□□□□ -0.2
NEDD8-204ENST00000526430 SLAIN1Q8ND83 568 aa13.78□□□□□ -0.2
NEDD8-204ENST00000526430 TEPSINQ96N21 525 aa13.78□□□□□ -0.2
NEDD8-204ENST00000526430 ADGRA2Q96PE1 1338 aa13.78□□□□□ -0.2
NEDD8-204ENST00000526430 DDX60LQ5H9U9 1706 aaKnown RBP13.78□□□□□ -0.2
NEDD8-204ENST00000526430 KLRK1P26718 216 aa13.77□□□□□ -0.21
NEDD8-204ENST00000526430 BCAMP50895 628 aa13.77□□□□□ -0.21
NEDD8-204ENST00000526430 MUC3AQ02505 3323 aa13.77□□□□□ -0.21
NEDD8-204ENST00000526430 AOX1Q06278 1338 aa13.77□□□□□ -0.21
NEDD8-204ENST00000526430 FKBP5Q13451 457 aaPredicted RBP13.77□□□□□ -0.21
NEDD8-204ENST00000526430 SNAPC2Q13487 334 aa13.77□□□□□ -0.21
NEDD8-204ENST00000526430 BEND3Q5T5X7 828 aa13.77□□□□□ -0.21
NEDD8-204ENST00000526430 TDHQ8IZJ6 230 aa13.77□□□□□ -0.21
NEDD8-204ENST00000526430 RPTORQ8N122 1335 aa13.77□□□□□ -0.21
NEDD8-204ENST00000526430 TTLL11Q8NHH1 800 aa13.77□□□□□ -0.21
NEDD8-204ENST00000526430 DNAAF4Q8WXU2 420 aa13.77□□□□□ -0.21
NEDD8-204ENST00000526430 ARHGAP45Q92619 1136 aa13.77□□□□□ -0.21
NEDD8-204ENST00000526430 ANKRD2Q9GZV1 360 aa13.77□□□□□ -0.21
NEDD8-204ENST00000526430 UNC93B1Q9H1C4 597 aa13.77□□□□□ -0.21
NEDD8-204ENST00000526430 CD209Q9NNX6 404 aa13.77□□□□□ -0.21
NEDD8-204ENST00000526430 CWC25Q9NXE8 425 aaPredicted RBP13.77□□□□□ -0.21
NEDD8-204ENST00000526430 RCAN3Q9UKA8 241 aa13.77□□□□□ -0.21
NEDD8-204ENST00000526430 PTPRFP10586 1907 aa13.76□□□□□ -0.21
NEDD8-204ENST00000526430 IRS2Q9Y4H2 1338 aa13.76□□□□□ -0.21
NEDD8-204ENST00000526430 CWF19L2Q2TBE0 894 aaKnown RBP13.76□□□□□ -0.21
NEDD8-204ENST00000526430 SPDYE2Q495Y8 402 aa13.76□□□□□ -0.21
NEDD8-204ENST00000526430 ERO1BQ86YB8 467 aa13.76□□□□□ -0.21
NEDD8-204ENST00000526430 MYD88Q99836 296 aa13.76□□□□□ -0.21
NEDD8-204ENST00000526430 BIN2Q9UBW5 565 aaPredicted RBP13.76□□□□□ -0.21
NEDD8-204ENST00000526430 COL2A1P02458 1487 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms