RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 NCAPGQ9BPX3 1015 aa11.46□□□□□ -0.58
USP35-201ENST00000526425 ANKRD65E5RJM6 399 aa11.45□□□□□ -0.58
USP35-201ENST00000526425 ZPR1O75312 459 aa11.45□□□□□ -0.58
USP35-201ENST00000526425 SDF4Q9BRK5 362 aa11.45□□□□□ -0.58
USP35-201ENST00000526425 VIRMAQ69YN4 1812 aaKnown RBP11.45□□□□□ -0.58
USP35-201ENST00000526425 AFF2P51816 1311 aa11.45□□□□□ -0.58
USP35-201ENST00000526425 KLF18A0A0U1RQI7 1052 aa11.45□□□□□ -0.58
USP35-201ENST00000526425 H7C1W4 665 aa11.45□□□□□ -0.58
USP35-201ENST00000526425 MPHOSPH10O00566 681 aaKnown RBP11.45□□□□□ -0.58
USP35-201ENST00000526425 HAUS7Q99871 368 aa11.45□□□□□ -0.58
USP35-201ENST00000526425 HMG20BQ9P0W2 317 aa11.45□□□□□ -0.58
USP35-201ENST00000526425 TRPC5Q9UL62 973 aaPredicted RBP11.45□□□□□ -0.58
USP35-201ENST00000526425 FOXO4P98177 505 aa11.45□□□□□ -0.58
USP35-201ENST00000526425 CCDC183Q5T5S1 534 aa11.45□□□□□ -0.58
USP35-201ENST00000526425 CCDC73Q6ZRK6 1079 aa11.45□□□□□ -0.58
USP35-201ENST00000526425 SYNE3Q6ZMZ3 975 aa11.44□□□□□ -0.58
USP35-201ENST00000526425 NUP62CLQ9H1M0 184 aa11.44□□□□□ -0.58
USP35-201ENST00000526425 CCNL1Q9UK58 526 aaPredicted RBP11.44□□□□□ -0.58
USP35-201ENST00000526425 TNS2Q63HR2 1409 aa11.44□□□□□ -0.58
USP35-201ENST00000526425 FAM208AQ9UK61 1670 aaKnown RBP11.44□□□□□ -0.58
USP35-201ENST00000526425 BECN2A8MW95 431 aa11.44□□□□□ -0.58
USP35-201ENST00000526425 UBE2HP62256 183 aa11.44□□□□□ -0.58
USP35-201ENST00000526425 SYT10Q6XYQ8 523 aa11.44□□□□□ -0.58
USP35-201ENST00000526425 ZBTB38Q8NAP3 1195 aaPredicted RBP11.44□□□□□ -0.58
USP35-201ENST00000526425 SEC31BQ9NQW1 1179 aa11.44□□□□□ -0.58
USP35-201ENST00000526425 CTNNA3Q9UI47 895 aa11.44□□□□□ -0.58
USP35-201ENST00000526425 SCARF1Q14162 830 aa11.44□□□□□ -0.58
USP35-201ENST00000526425 STK38Q15208 465 aa11.44□□□□□ -0.58
USP35-201ENST00000526425 HS1BP3Q53T59 392 aa11.44□□□□□ -0.58
USP35-201ENST00000526425 CPLX2Q6PUV4 134 aaKnown RBP11.44□□□□□ -0.58
USP35-201ENST00000526425 ZKSCAN3Q9BRR0 538 aa11.44□□□□□ -0.58
USP35-201ENST00000526425 UTP14AQ9BVJ6 771 aaKnown RBP11.44□□□□□ -0.58
USP35-201ENST00000526425 NAPBQ9H115 298 aa11.44□□□□□ -0.58
USP35-201ENST00000526425 QTRT2Q9H974 415 aaKnown RBP11.44□□□□□ -0.58
USP35-201ENST00000526425 MTMR6Q9Y217 621 aa11.44□□□□□ -0.58
USP35-201ENST00000526425 GNPATO15228 680 aa11.43□□□□□ -0.58
USP35-201ENST00000526425 PCCAP05165 728 aaPredicted RBP11.43□□□□□ -0.58
USP35-201ENST00000526425 MCM5P33992 734 aa11.43□□□□□ -0.58
USP35-201ENST00000526425 DACT1Q9NYF0 836 aa11.43□□□□□ -0.58
USP35-201ENST00000526425 BCL9O00512 1426 aa11.43□□□□□ -0.58
USP35-201ENST00000526425 HSPD1P10809 573 aaKnown RBP11.43□□□□□ -0.58
USP35-201ENST00000526425 PDE6BP35913 854 aa11.43□□□□□ -0.58
USP35-201ENST00000526425 TICAM2Q86XR7 235 aa11.43□□□□□ -0.58
USP35-201ENST00000526425 COL18A1P39060 1754 aa11.43□□□□□ -0.58
USP35-201ENST00000526425 UTYO14607 1347 aa11.43□□□□□ -0.58
USP35-201ENST00000526425 SH3TC1Q8TE82 1336 aa11.43□□□□□ -0.58
USP35-201ENST00000526425 PTPDC1A2A3K4 754 aa11.43□□□□□ -0.58
USP35-201ENST00000526425 GOLGA6L19H0YKK7 550 aa11.43□□□□□ -0.58
USP35-201ENST00000526425 GPAA1O43292 621 aa11.43□□□□□ -0.58
USP35-201ENST00000526425 PRC1O43663 620 aa11.43□□□□□ -0.58
USP35-201ENST00000526425 PHKA1P46020 1223 aa11.43□□□□□ -0.58
USP35-201ENST00000526425 TRIM29Q14134 588 aa11.43□□□□□ -0.58
USP35-201ENST00000526425 DHX32Q7L7V1 743 aaKnown RBP11.43□□□□□ -0.58
USP35-201ENST00000526425 NLRP10Q86W26 655 aa11.43□□□□□ -0.58
USP35-201ENST00000526425 MAGEB6Q8N7X4 407 aa11.43□□□□□ -0.58
USP35-201ENST00000526425 GJD4Q96KN9 370 aaPredicted RBP11.43□□□□□ -0.58
USP35-201ENST00000526425 TTC14Q96N46 770 aa11.43□□□□□ -0.58
USP35-201ENST00000526425 MYL10Q9BUA6 226 aa11.43□□□□□ -0.58
USP35-201ENST00000526425 JRKLQ9Y4A0 524 aa11.43□□□□□ -0.58
USP35-201ENST00000526425 M0R2C6 588 aa11.42□□□□□ -0.58
USP35-201ENST00000526425 SLC5A1P13866 664 aa11.42□□□□□ -0.58
USP35-201ENST00000526425 RFX5P48382 616 aaPredicted RBP11.42□□□□□ -0.58
USP35-201ENST00000526425 ISM2Q6H9L7 571 aa11.42□□□□□ -0.58
USP35-201ENST00000526425 ATG9AQ7Z3C6 839 aa11.42□□□□□ -0.58
USP35-201ENST00000526425 ERCC4Q92889 916 aaPredicted RBP11.42□□□□□ -0.58
USP35-201ENST00000526425 OSBP2Q969R2 916 aa11.42□□□□□ -0.58
USP35-201ENST00000526425 AK7Q96M32 723 aa11.42□□□□□ -0.58
USP35-201ENST00000526425 ORC3Q9UBD5 711 aaPredicted RBP11.42□□□□□ -0.58
USP35-201ENST00000526425 SLC20A2Q08357 652 aa11.42□□□□□ -0.58
USP35-201ENST00000526425 LRCH2Q5VUJ6 765 aa11.42□□□□□ -0.58
USP35-201ENST00000526425 ISCA1Q9BUE6 129 aa11.42□□□□□ -0.58
USP35-201ENST00000526425 TRIM5Q9C035 493 aa11.42□□□□□ -0.58
USP35-201ENST00000526425 RTCBQ9Y3I0 505 aaKnown RBP11.42□□□□□ -0.58
USP35-201ENST00000526425 NHSL1Q5SYE7 1610 aa11.42□□□□□ -0.58
USP35-201ENST00000526425 AHDC1Q5TGY3 1603 aaPredicted RBP11.42□□□□□ -0.58
USP35-201ENST00000526425 LTBP4Q8N2S1 1624 aa11.42□□□□□ -0.58
USP35-201ENST00000526425 PHLPP1O60346 1717 aa11.42□□□□□ -0.58
USP35-201ENST00000526425 E7EWF7 191 aa11.42□□□□□ -0.58
USP35-201ENST00000526425 LRP10Q7Z4F1 713 aa11.42□□□□□ -0.58
USP35-201ENST00000526425 SEPT12Q8IYM1 358 aa11.42□□□□□ -0.58
USP35-201ENST00000526425 FTOQ9C0B1 505 aaKnown RBP eCLIP11.42□□□□□ -0.58
USP35-201ENST00000526425 CCDC192P0DO97 292 aa11.41□□□□□ -0.58
USP35-201ENST00000526425 CTSWP56202 376 aa11.41□□□□□ -0.58
USP35-201ENST00000526425 TEX35Q5T0J7 233 aa11.41□□□□□ -0.58
USP35-201ENST00000526425 CREBRFQ8IUR6 639 aa11.41□□□□□ -0.58
USP35-201ENST00000526425 C8orf76Q96K31 380 aa11.41□□□□□ -0.58
USP35-201ENST00000526425 SUFUQ9UMX1 484 aa11.41□□□□□ -0.58
USP35-201ENST00000526425 MAST3O60307 1309 aa11.41□□□□□ -0.58
USP35-201ENST00000526425 ERICH2A1L162 156 aa11.41□□□□□ -0.58
USP35-201ENST00000526425 B4E1Z4 1266 aa11.41□□□□□ -0.58
USP35-201ENST00000526425 KINO60870 393 aaKnown RBP11.41□□□□□ -0.58
USP35-201ENST00000526425 CYP2E1P05181 493 aaPredicted RBP11.41□□□□□ -0.58
USP35-201ENST00000526425 MAP3K11Q16584 847 aa11.41□□□□□ -0.58
USP35-201ENST00000526425 SLC4A9Q96Q91 983 aa11.41□□□□□ -0.58
USP35-201ENST00000526425 PARP4Q9UKK3 1724 aaKnown RBP11.41□□□□□ -0.58
USP35-201ENST00000526425 ERVV-1B6SEH8 477 aa11.41□□□□□ -0.58
USP35-201ENST00000526425 PDE8AO60658 829 aa11.41□□□□□ -0.58
USP35-201ENST00000526425 RFC4P35249 363 aa11.41□□□□□ -0.58
USP35-201ENST00000526425 MAP3K12Q12852 859 aa11.41□□□□□ -0.58
USP35-201ENST00000526425 PARP10Q53GL7 1025 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms