RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 CACNB1Q02641 598 aaPredicted RBP11.79□□□□□ -0.52
SF3B2-204ENST00000525207 TNFAIP1Q13829 316 aa11.79□□□□□ -0.52
SF3B2-204ENST00000525207 MAP3K11Q16584 847 aa11.79□□□□□ -0.52
SF3B2-204ENST00000525207 DIEXFQ68CQ4 756 aaKnown RBP11.79□□□□□ -0.52
SF3B2-204ENST00000525207 REM2Q8IYK8 340 aaPredicted RBP11.79□□□□□ -0.52
SF3B2-204ENST00000525207 MIER1Q8N108 512 aa11.79□□□□□ -0.52
SF3B2-204ENST00000525207 LPIN2Q92539 896 aa11.79□□□□□ -0.52
SF3B2-204ENST00000525207 ABHD8Q96I13 439 aa11.79□□□□□ -0.52
SF3B2-204ENST00000525207 SIL1Q9H173 461 aa11.79□□□□□ -0.52
SF3B2-204ENST00000525207 ANGEL1Q9UNK9 670 aaKnown RBP11.79□□□□□ -0.52
SF3B2-204ENST00000525207 HDAC5Q9UQL6 1122 aa11.79□□□□□ -0.52
SF3B2-204ENST00000525207 FRAT2O75474 233 aaPredicted RBP11.78□□□□□ -0.52
SF3B2-204ENST00000525207 HNRNPUQ00839 825 aaKnown RBP eCLIP11.78□□□□□ -0.52
SF3B2-204ENST00000525207 PRKG1Q13976 671 aa11.78□□□□□ -0.52
SF3B2-204ENST00000525207 LDLRAD1Q5T700 205 aa11.78□□□□□ -0.52
SF3B2-204ENST00000525207 ATF7IPQ6VMQ6 1270 aa11.78□□□□□ -0.52
SF3B2-204ENST00000525207 DZIP1LQ8IYY4 767 aaKnown RBP11.78□□□□□ -0.52
SF3B2-204ENST00000525207 RNF186Q9NXI6 227 aa11.78□□□□□ -0.52
SF3B2-204ENST00000525207 ZNF70Q9UC06 446 aaPredicted RBP11.78□□□□□ -0.52
SF3B2-204ENST00000525207 FZD1Q9UP38 647 aa11.78□□□□□ -0.52
SF3B2-204ENST00000525207 PA2G4Q9UQ80 394 aaKnown RBP11.78□□□□□ -0.52
SF3B2-204ENST00000525207 MAST3O60307 1309 aa11.78□□□□□ -0.52
SF3B2-204ENST00000525207 RPAP1Q9BWH6 1393 aaPredicted RBP11.78□□□□□ -0.52
SF3B2-204ENST00000525207 TRPA1O75762 1119 aa11.77□□□□□ -0.53
SF3B2-204ENST00000525207 GNAI3P08754 354 aa11.77□□□□□ -0.53
SF3B2-204ENST00000525207 IL15P40933 162 aaPredicted RBP11.77□□□□□ -0.53
SF3B2-204ENST00000525207 HDLBPQ00341 1268 aaKnown RBP11.77□□□□□ -0.53
SF3B2-204ENST00000525207 MTX1Q13505 466 aa11.77□□□□□ -0.53
SF3B2-204ENST00000525207 RASA3Q14644 834 aa11.77□□□□□ -0.53
SF3B2-204ENST00000525207 ATP2B3Q16720 1220 aa11.77□□□□□ -0.53
SF3B2-204ENST00000525207 TEKT1Q969V4 418 aa11.77□□□□□ -0.53
SF3B2-204ENST00000525207 TDRD3Q9H7E2 651 aaKnown RBP11.77□□□□□ -0.53
SF3B2-204ENST00000525207 COPRSQ9NQ92 184 aa11.77□□□□□ -0.53
SF3B2-204ENST00000525207 TNNQ9UQP3 1299 aa11.77□□□□□ -0.53
SF3B2-204ENST00000525207 SUGT1Q9Y2Z0 365 aa11.77□□□□□ -0.53
SF3B2-204ENST00000525207 DOCK2Q92608 1830 aa11.76□□□□□ -0.53
SF3B2-204ENST00000525207 MYH2Q9UKX2 1941 aa11.76□□□□□ -0.53
SF3B2-204ENST00000525207 IPO8O15397 1037 aaKnown RBP11.76□□□□□ -0.53
SF3B2-204ENST00000525207 PPP1R12BO60237 982 aaPredicted RBP11.76□□□□□ -0.53
SF3B2-204ENST00000525207 BCAR3O75815 825 aa11.76□□□□□ -0.53
SF3B2-204ENST00000525207 SUPT20HL1Q3ZLR7 823 aa11.76□□□□□ -0.53
SF3B2-204ENST00000525207 NBPF12Q5TAG4 269 aaPredicted RBP11.76□□□□□ -0.53
SF3B2-204ENST00000525207 SPRYD7Q5W111 196 aa11.76□□□□□ -0.53
SF3B2-204ENST00000525207 CDAN1Q8IWY9 1227 aa11.76□□□□□ -0.53
SF3B2-204ENST00000525207 TEPSINQ96N21 525 aa11.76□□□□□ -0.53
SF3B2-204ENST00000525207 MCOLN1Q9GZU1 580 aa11.76□□□□□ -0.53
SF3B2-204ENST00000525207 CEP126Q9P2H0 1117 aa11.76□□□□□ -0.53
SF3B2-204ENST00000525207 MAST2Q6P0Q8 1798 aa11.75□□□□□ -0.53
SF3B2-204ENST00000525207 UNCXA6NJT0 531 aa11.75□□□□□ -0.53
SF3B2-204ENST00000525207 ZBTB48P10074 688 aaPredicted RBP11.75□□□□□ -0.53
SF3B2-204ENST00000525207 SREBF2Q12772 1141 aa11.75□□□□□ -0.53
SF3B2-204ENST00000525207 MKRN3Q13064 507 aaKnown RBP11.75□□□□□ -0.53
SF3B2-204ENST00000525207 WDR66Q8TBY9 1149 aa11.75□□□□□ -0.53
SF3B2-204ENST00000525207 FRAT1Q92837 279 aaPredicted RBP11.75□□□□□ -0.53
SF3B2-204ENST00000525207 CLMNQ96JQ2 1002 aa11.75□□□□□ -0.53
SF3B2-204ENST00000525207 ZDHHC15Q96MV8 337 aa11.75□□□□□ -0.53
SF3B2-204ENST00000525207 ZBED9Q6R2W3 1325 aa11.75□□□□□ -0.53
SF3B2-204ENST00000525207 TCP10L2B9ZVM9 353 aa11.74□□□□□ -0.53
SF3B2-204ENST00000525207 SRGAP3O43295 1099 aa11.74□□□□□ -0.53
SF3B2-204ENST00000525207 PHKA1P46020 1223 aa11.74□□□□□ -0.53
SF3B2-204ENST00000525207 IREB2P48200 963 aaKnown RBP11.74□□□□□ -0.53
SF3B2-204ENST00000525207 TM4SF4P48230 202 aa11.74□□□□□ -0.53
SF3B2-204ENST00000525207 TNNI2P48788 182 aa11.74□□□□□ -0.53
SF3B2-204ENST00000525207 DGKZQ13574 1117 aa11.74□□□□□ -0.53
SF3B2-204ENST00000525207 APOBEC3HQ6NTF7 200 aaKnown RBP11.74□□□□□ -0.53
SF3B2-204ENST00000525207 CLUAP1Q96AJ1 413 aa11.74□□□□□ -0.53
SF3B2-204ENST00000525207 WNK4Q96J92 1243 aa11.74□□□□□ -0.53
SF3B2-204ENST00000525207 TMEM39BQ9GZU3 492 aa11.74□□□□□ -0.53
SF3B2-204ENST00000525207 SALL1Q9NSC2 1324 aa11.74□□□□□ -0.53
SF3B2-204ENST00000525207 SEMA3EO15041 775 aa11.73□□□□□ -0.53
SF3B2-204ENST00000525207 PRDX5P30044 214 aa11.73□□□□□ -0.53
SF3B2-204ENST00000525207 ADORA1P30542 326 aa11.73□□□□□ -0.53
SF3B2-204ENST00000525207 CACNB3P54284 484 aa11.73□□□□□ -0.53
SF3B2-204ENST00000525207 ZKSCAN2Q63HK3 967 aa11.73□□□□□ -0.53
SF3B2-204ENST00000525207 HHIPL2Q6UWX4 724 aa11.73□□□□□ -0.53
SF3B2-204ENST00000525207 ANKRD13AQ8IZ07 590 aa11.73□□□□□ -0.53
SF3B2-204ENST00000525207 TMEM57Q8N5G2 664 aa11.73□□□□□ -0.53
SF3B2-204ENST00000525207 MRIQ9BWK5 157 aa11.73□□□□□ -0.53
SF3B2-204ENST00000525207 CFHR5Q9BXR6 569 aa11.73□□□□□ -0.53
SF3B2-204ENST00000525207 TMOD2Q9NZR1 351 aa11.73□□□□□ -0.53
SF3B2-204ENST00000525207 RFX7Q2KHR2 1363 aa11.72□□□□□ -0.53
SF3B2-204ENST00000525207 PDS5AQ29RF7 1337 aaKnown RBP11.72□□□□□ -0.53
SF3B2-204ENST00000525207 MANSC4A6NHS7 340 aaPredicted RBP11.72□□□□□ -0.53
SF3B2-204ENST00000525207 USP2O75604 605 aaPredicted RBP11.72□□□□□ -0.53
SF3B2-204ENST00000525207 GNAI2P04899 355 aa11.72□□□□□ -0.53
SF3B2-204ENST00000525207 GJA5P36382 358 aa11.72□□□□□ -0.53
SF3B2-204ENST00000525207 NOM1Q5C9Z4 860 aaKnown RBP11.72□□□□□ -0.53
SF3B2-204ENST00000525207 FKBP1CQ5VVH2 108 aa11.72□□□□□ -0.53
SF3B2-204ENST00000525207 CCDC102BQ68D86 513 aa11.72□□□□□ -0.53
SF3B2-204ENST00000525207 FAM83AQ86UY5 434 aa11.72□□□□□ -0.53
SF3B2-204ENST00000525207 SLC10A4Q96EP9 437 aa11.72□□□□□ -0.53
SF3B2-204ENST00000525207 GNL3LQ9NVN8 582 aaKnown RBP11.72□□□□□ -0.53
SF3B2-204ENST00000525207 DENND2AQ9ULE3 1009 aa11.72□□□□□ -0.53
SF3B2-204ENST00000525207 DAGLAQ9Y4D2 1042 aa11.72□□□□□ -0.53
SF3B2-204ENST00000525207 AK9Q5TCS8 1911 aa11.72□□□□□ -0.53
SF3B2-204ENST00000525207 PNMA6EA0A0J9YXQ4 647 aa11.71□□□□□ -0.53
SF3B2-204ENST00000525207 A0A1B0GUL7 405 aa11.71□□□□□ -0.53
SF3B2-204ENST00000525207 TBC1D8O95759 1140 aa11.71□□□□□ -0.53
SF3B2-204ENST00000525207 RASGRF1Q13972 1273 aa11.71□□□□□ -0.53
SF3B2-204ENST00000525207 DIXDC1Q155Q3 683 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms