RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.54■□□□□ 0.4
CSTF3-206ENST00000524827 DZIP1LQ8IYY4 767 aaKnown RBP17.54■□□□□ 0.4
CSTF3-206ENST00000524827 BRCA2P51587 3418 aa17.53■□□□□ 0.4
CSTF3-206ENST00000524827 TCP10L2B9ZVM9 353 aa17.53■□□□□ 0.4
CSTF3-206ENST00000524827 HIBADHP31937 336 aaKnown RBP17.53■□□□□ 0.4
CSTF3-206ENST00000524827 VGLL4Q14135 290 aa17.53■□□□□ 0.4
CSTF3-206ENST00000524827 TAF1CQ15572 869 aaPredicted RBP17.53■□□□□ 0.4
CSTF3-206ENST00000524827 FAM84BQ96KN1 310 aaPredicted RBP17.53■□□□□ 0.4
CSTF3-206ENST00000524827 TMEM39BQ9GZU3 492 aa17.53■□□□□ 0.4
CSTF3-206ENST00000524827 CCL15-CCL14A0A0B4J2E2 113 aa17.52■□□□□ 0.4
CSTF3-206ENST00000524827 CRKP46108 304 aa17.52■□□□□ 0.4
CSTF3-206ENST00000524827 CCL15Q16663 113 aa17.52■□□□□ 0.4
CSTF3-206ENST00000524827 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.52■□□□□ 0.4
CSTF3-206ENST00000524827 ZNF333Q96JL9 665 aa17.52■□□□□ 0.4
CSTF3-206ENST00000524827 PUS3Q9BZE2 481 aaKnown RBP17.52■□□□□ 0.4
CSTF3-206ENST00000524827 C9orf78Q9NZ63 289 aaPredicted RBP17.52■□□□□ 0.4
CSTF3-206ENST00000524827 TNNI2P48788 182 aa17.51■□□□□ 0.39
CSTF3-206ENST00000524827 GTF2A2P52657 109 aa17.51■□□□□ 0.39
CSTF3-206ENST00000524827 MAP3K9P80192 1104 aa17.51■□□□□ 0.39
CSTF3-206ENST00000524827 WDR63Q8IWG1 891 aa17.51■□□□□ 0.39
CSTF3-206ENST00000524827 FAM43AQ8N2R8 423 aa17.51■□□□□ 0.39
CSTF3-206ENST00000524827 OTUD5Q96G74 571 aa17.51■□□□□ 0.39
CSTF3-206ENST00000524827 TMEM106CQ9BVX2 250 aa17.51■□□□□ 0.39
CSTF3-206ENST00000524827 ZFYVE28Q9HCC9 887 aa17.51■□□□□ 0.39
CSTF3-206ENST00000524827 SALL2Q9Y467 1007 aaPredicted RBP17.51■□□□□ 0.39
CSTF3-206ENST00000524827 CSADQ9Y600 493 aa17.51■□□□□ 0.39
CSTF3-206ENST00000524827 PTCH2Q9Y6C5 1203 aa17.51■□□□□ 0.39
CSTF3-206ENST00000524827 ALDH1L1O75891 902 aa17.5■□□□□ 0.39
CSTF3-206ENST00000524827 GRIK5Q16478 980 aa17.5■□□□□ 0.39
CSTF3-206ENST00000524827 SLC9C1Q4G0N8 1177 aa17.5■□□□□ 0.39
CSTF3-206ENST00000524827 CEP290O15078 2479 aa17.5■□□□□ 0.39
CSTF3-206ENST00000524827 ARHGEF6Q15052 776 aa17.49■□□□□ 0.39
CSTF3-206ENST00000524827 KAZALD1Q96I82 304 aa17.49■□□□□ 0.39
CSTF3-206ENST00000524827 SUCLG2Q96I99 432 aa17.49■□□□□ 0.39
CSTF3-206ENST00000524827 IQSEC3Q9UPP2 1182 aaPredicted RBP17.49■□□□□ 0.39
CSTF3-206ENST00000524827 SPDYE5A6NIY4 337 aa17.48■□□□□ 0.39
CSTF3-206ENST00000524827 CACNB3P54284 484 aa17.48■□□□□ 0.39
CSTF3-206ENST00000524827 CHAF1AQ13111 956 aaPredicted RBP17.48■□□□□ 0.39
CSTF3-206ENST00000524827 SLC4A10Q6U841 1118 aa17.48■□□□□ 0.39
CSTF3-206ENST00000524827 SRCIN1Q9C0H9 1055 aa17.48■□□□□ 0.39
CSTF3-206ENST00000524827 SPINK5Q9NQ38 1064 aaPredicted RBP17.48■□□□□ 0.39
CSTF3-206ENST00000524827 RIPOR2Q9Y4F9 1068 aa17.48■□□□□ 0.39
CSTF3-206ENST00000524827 SNCAIPQ9Y6H5 919 aa17.48■□□□□ 0.39
CSTF3-206ENST00000524827 ZSWIM8A7E2V4 1837 aa17.48■□□□□ 0.39
CSTF3-206ENST00000524827 MROH5Q6ZUA9 1318 aa17.47■□□□□ 0.39
CSTF3-206ENST00000524827 HDLBPQ00341 1268 aaKnown RBP17.47■□□□□ 0.39
CSTF3-206ENST00000524827 FBXO33Q7Z6M2 555 aa17.47■□□□□ 0.39
CSTF3-206ENST00000524827 NBPF11Q86T75 865 aa17.47■□□□□ 0.39
CSTF3-206ENST00000524827 VPS37DQ86XT2 251 aa17.47■□□□□ 0.39
CSTF3-206ENST00000524827 FXR1P51114 621 aaKnown RBP eCLIP17.46■□□□□ 0.39
CSTF3-206ENST00000524827 SLC4A8Q2Y0W8 1093 aa17.46■□□□□ 0.39
CSTF3-206ENST00000524827 TBC1D22AQ8WUA7 517 aa17.46■□□□□ 0.39
CSTF3-206ENST00000524827 TEKT1Q969V4 418 aa17.46■□□□□ 0.39
CSTF3-206ENST00000524827 WRNIP1Q96S55 665 aa17.46■□□□□ 0.39
CSTF3-206ENST00000524827 ARHGAP39Q9C0H5 1083 aa17.46■□□□□ 0.39
CSTF3-206ENST00000524827 MRS2Q9HD23 443 aa17.46■□□□□ 0.39
CSTF3-206ENST00000524827 TLR2O60603 784 aa17.45■□□□□ 0.38
CSTF3-206ENST00000524827 WDHD1O75717 1129 aaPredicted RBP17.45■□□□□ 0.38
CSTF3-206ENST00000524827 MYCP01106 439 aaPredicted RBP17.45■□□□□ 0.38
CSTF3-206ENST00000524827 NBPF7P0C2Y1 421 aaPredicted RBP17.45■□□□□ 0.38
CSTF3-206ENST00000524827 CETPP11597 493 aa17.45■□□□□ 0.38
CSTF3-206ENST00000524827 ERO1BQ86YB8 467 aa17.45■□□□□ 0.38
CSTF3-206ENST00000524827 TRIOBPQ9H2D6 2365 aa17.45■□□□□ 0.38
CSTF3-206ENST00000524827 BTBD19C9JJ37 291 aa17.44■□□□□ 0.38
CSTF3-206ENST00000524827 FRAT2O75474 233 aaPredicted RBP17.44■□□□□ 0.38
CSTF3-206ENST00000524827 LACTBP83111 547 aaPredicted RBP17.44■□□□□ 0.38
CSTF3-206ENST00000524827 LRRC24Q50LG9 513 aa17.44■□□□□ 0.38
CSTF3-206ENST00000524827 CAVIN4Q5BKX8 364 aa17.44■□□□□ 0.38
CSTF3-206ENST00000524827 METTL24Q5JXM2 366 aa17.44■□□□□ 0.38
CSTF3-206ENST00000524827 SH3TC2Q8TF17 1288 aa17.44■□□□□ 0.38
CSTF3-206ENST00000524827 ZKSCAN4Q969J2 545 aaPredicted RBP17.44■□□□□ 0.38
CSTF3-206ENST00000524827 ZDHHC15Q96MV8 337 aa17.44■□□□□ 0.38
CSTF3-206ENST00000524827 BICC1Q9H694 974 aaKnown RBP17.44■□□□□ 0.38
CSTF3-206ENST00000524827 ZCCHC17Q9NP64 241 aaKnown RBP17.44■□□□□ 0.38
CSTF3-206ENST00000524827 TMOD2Q9NZR1 351 aa17.44■□□□□ 0.38
CSTF3-206ENST00000524827 UTYO14607 1347 aa17.44■□□□□ 0.38
CSTF3-206ENST00000524827 IRF6O14896 467 aa17.43■□□□□ 0.38
CSTF3-206ENST00000524827 PPIL2Q13356 520 aa17.43■□□□□ 0.38
CSTF3-206ENST00000524827 SNAPC2Q13487 334 aa17.43■□□□□ 0.38
CSTF3-206ENST00000524827 KIF22Q14807 665 aa17.43■□□□□ 0.38
CSTF3-206ENST00000524827 RABL6Q3YEC7 729 aaPredicted RBP17.43■□□□□ 0.38
CSTF3-206ENST00000524827 FAM83AQ86UY5 434 aa17.43■□□□□ 0.38
CSTF3-206ENST00000524827 VGLL2Q8N8G2 317 aa17.43■□□□□ 0.38
CSTF3-206ENST00000524827 COLQQ9Y215 455 aaPredicted RBP17.43■□□□□ 0.38
CSTF3-206ENST00000524827 RPAP1Q9BWH6 1393 aaPredicted RBP17.42■□□□□ 0.38
CSTF3-206ENST00000524827 PDE8BO95263 885 aa17.42■□□□□ 0.38
CSTF3-206ENST00000524827 FKBP1CQ5VVH2 108 aa17.42■□□□□ 0.38
CSTF3-206ENST00000524827 APOBEC3HQ6NTF7 200 aaKnown RBP17.42■□□□□ 0.38
CSTF3-206ENST00000524827 ANKRD44Q8N8A2 993 aa17.42■□□□□ 0.38
CSTF3-206ENST00000524827 HOOK2Q96ED9 719 aa17.42■□□□□ 0.38
CSTF3-206ENST00000524827 MRIQ9BWK5 157 aa17.42■□□□□ 0.38
CSTF3-206ENST00000524827 MAST3O60307 1309 aa17.42■□□□□ 0.38
CSTF3-206ENST00000524827 BCAMP50895 628 aa17.41■□□□□ 0.38
CSTF3-206ENST00000524827 DCAF15Q66K64 600 aa17.41■□□□□ 0.38
CSTF3-206ENST00000524827 GNRH1P01148 92 aa17.4■□□□□ 0.38
CSTF3-206ENST00000524827 ZNF341Q9BYN7 854 aa17.4■□□□□ 0.38
CSTF3-206ENST00000524827 SUGT1Q9Y2Z0 365 aa17.4■□□□□ 0.38
CSTF3-206ENST00000524827 H0YGN5 161 aa17.39■□□□□ 0.37
CSTF3-206ENST00000524827 ECM2O94769 699 aaPredicted RBP17.39■□□□□ 0.37
CSTF3-206ENST00000524827 INPP5BP32019 993 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms