RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 THAP3Q8WTV1 239 aaPredicted RBP12.05□□□□□ -0.48
PFDN1-207ENST00000524074 LEMD3Q9Y2U8 911 aa12.05□□□□□ -0.48
PFDN1-207ENST00000524074 PCDHGC4Q9Y5F7 938 aa12.05□□□□□ -0.48
PFDN1-207ENST00000524074 PDE2AO00408 941 aaPredicted RBP12.04□□□□□ -0.48
PFDN1-207ENST00000524074 ZNF157P51786 506 aaPredicted RBP12.04□□□□□ -0.48
PFDN1-207ENST00000524074 LAMC2Q13753 1193 aa12.04□□□□□ -0.48
PFDN1-207ENST00000524074 SCARF1Q14162 830 aa12.04□□□□□ -0.48
PFDN1-207ENST00000524074 PPP2R5EQ16537 467 aa12.04□□□□□ -0.48
PFDN1-207ENST00000524074 DHX32Q7L7V1 743 aaKnown RBP12.04□□□□□ -0.48
PFDN1-207ENST00000524074 LSRQ86X29 649 aaPredicted RBP12.04□□□□□ -0.48
PFDN1-207ENST00000524074 NFKBIEO00221 500 aa12.03□□□□□ -0.48
PFDN1-207ENST00000524074 CILPO75339 1184 aa12.03□□□□□ -0.48
PFDN1-207ENST00000524074 TNKS2Q9H2K2 1166 aa12.03□□□□□ -0.48
PFDN1-207ENST00000524074 CYP8B1Q9UNU6 501 aa12.03□□□□□ -0.48
PFDN1-207ENST00000524074 MASP1P48740 699 aa12.02□□□□□ -0.49
PFDN1-207ENST00000524074 NRLP54845 237 aa12.02□□□□□ -0.49
PFDN1-207ENST00000524074 CLCQ05315 142 aa12.02□□□□□ -0.49
PFDN1-207ENST00000524074 SPEM2Q0P670 501 aa12.02□□□□□ -0.49
PFDN1-207ENST00000524074 LRRC14Q15048 493 aa12.02□□□□□ -0.49
PFDN1-207ENST00000524074 IFFO2Q5TF58 517 aa12.02□□□□□ -0.49
PFDN1-207ENST00000524074 RBBP8NLQ8NC74 664 aaPredicted RBP12.02□□□□□ -0.49
PFDN1-207ENST00000524074 BHMTQ93088 406 aa12.02□□□□□ -0.49
PFDN1-207ENST00000524074 CHPF2Q9P2E5 772 aa12.02□□□□□ -0.49
PFDN1-207ENST00000524074 SOS2Q07890 1332 aaPredicted RBP12.02□□□□□ -0.49
PFDN1-207ENST00000524074 DDAH1O94760 285 aa12.01□□□□□ -0.49
PFDN1-207ENST00000524074 GJB6O95452 261 aa12.01□□□□□ -0.49
PFDN1-207ENST00000524074 CASP7P55210 303 aa12.01□□□□□ -0.49
PFDN1-207ENST00000524074 TCEA2Q15560 299 aa12.01□□□□□ -0.49
PFDN1-207ENST00000524074 POTEGQ6S5H5 508 aa12.01□□□□□ -0.49
PFDN1-207ENST00000524074 PFDN2Q9UHV9 154 aa12.01□□□□□ -0.49
PFDN1-207ENST00000524074 SUGT1Q9Y2Z0 365 aa12.01□□□□□ -0.49
PFDN1-207ENST00000524074 KDM2BQ8NHM5 1336 aa12.01□□□□□ -0.49
PFDN1-207ENST00000524074 NME2P22392 152 aa12□□□□□ -0.49
PFDN1-207ENST00000524074 TKFCQ3LXA3 575 aa12□□□□□ -0.49
PFDN1-207ENST00000524074 STAG1Q8WVM7 1258 aa12□□□□□ -0.49
PFDN1-207ENST00000524074 PBX4Q9BYU1 374 aa12□□□□□ -0.49
PFDN1-207ENST00000524074 CLEC4MQ9H2X3 399 aaPredicted RBP12□□□□□ -0.49
PFDN1-207ENST00000524074 TYW1Q9NV66 732 aaKnown RBP12□□□□□ -0.49
PFDN1-207ENST00000524074 MARK1Q9P0L2 795 aa12□□□□□ -0.49
PFDN1-207ENST00000524074 G3BP2Q9UN86 482 aaKnown RBP12□□□□□ -0.49
PFDN1-207ENST00000524074 MAPTP10636 758 aaKnown RBP11.99□□□□□ -0.49
PFDN1-207ENST00000524074 HCLS1P14317 486 aaPredicted RBP11.99□□□□□ -0.49
PFDN1-207ENST00000524074 BMP6P22004 513 aa11.99□□□□□ -0.49
PFDN1-207ENST00000524074 TNP2Q05952 138 aa11.99□□□□□ -0.49
PFDN1-207ENST00000524074 RASIP1Q5U651 963 aa11.99□□□□□ -0.49
PFDN1-207ENST00000524074 LLGL2Q6P1M3 1020 aa11.99□□□□□ -0.49
PFDN1-207ENST00000524074 MUC3BQ9H195 1237 aa11.99□□□□□ -0.49
PFDN1-207ENST00000524074 RASSF4Q9H2L5 321 aa11.99□□□□□ -0.49
PFDN1-207ENST00000524074 STRN4Q9NRL3 753 aa11.99□□□□□ -0.49
PFDN1-207ENST00000524074 PTCH2Q9Y6C5 1203 aa11.99□□□□□ -0.49
PFDN1-207ENST00000524074 PDGFRBP09619 1106 aa11.98□□□□□ -0.49
PFDN1-207ENST00000524074 PRR20EP86478 221 aa11.98□□□□□ -0.49
PFDN1-207ENST00000524074 PRR20CP86479 221 aa11.98□□□□□ -0.49
PFDN1-207ENST00000524074 PRR20DP86480 221 aa11.98□□□□□ -0.49
PFDN1-207ENST00000524074 PRR20BP86481 221 aa11.98□□□□□ -0.49
PFDN1-207ENST00000524074 PRR20AP86496 221 aa11.98□□□□□ -0.49
PFDN1-207ENST00000524074 SSRP1Q08945 709 aaKnown RBP11.98□□□□□ -0.49
PFDN1-207ENST00000524074 KANK3Q6NY19 840 aa11.98□□□□□ -0.49
PFDN1-207ENST00000524074 RIPOR1Q6ZS17 1223 aa11.98□□□□□ -0.49
PFDN1-207ENST00000524074 CERS3Q8IU89 383 aa11.98□□□□□ -0.49
PFDN1-207ENST00000524074 SULF2Q8IWU5 870 aa11.98□□□□□ -0.49
PFDN1-207ENST00000524074 SYNPOQ8N3V7 929 aa11.98□□□□□ -0.49
PFDN1-207ENST00000524074 CBX8Q9HC52 389 aa11.98□□□□□ -0.49
PFDN1-207ENST00000524074 PCDHB14Q9Y5E9 798 aa11.98□□□□□ -0.49
PFDN1-207ENST00000524074 LOC102724428A0A0B4J2F2 783 aa11.97□□□□□ -0.49
PFDN1-207ENST00000524074 SIK1P57059 783 aa11.97□□□□□ -0.49
PFDN1-207ENST00000524074 NEUROD1Q13562 356 aa11.97□□□□□ -0.49
PFDN1-207ENST00000524074 RAB44Q7Z6P3 723 aaPredicted RBP11.97□□□□□ -0.49
PFDN1-207ENST00000524074 C19orf47Q8N9M1 422 aaKnown RBP11.97□□□□□ -0.49
PFDN1-207ENST00000524074 RBSNQ9H1K0 784 aa11.97□□□□□ -0.49
PFDN1-207ENST00000524074 DIAPH1O60610 1272 aaKnown RBP11.96□□□□□ -0.49
PFDN1-207ENST00000524074 ASMTLO95671 621 aa11.96□□□□□ -0.49
PFDN1-207ENST00000524074 GHRHP01286 108 aa11.96□□□□□ -0.49
PFDN1-207ENST00000524074 ATP11AP98196 1134 aa11.96□□□□□ -0.49
PFDN1-207ENST00000524074 JMYQ8N9B5 988 aa11.96□□□□□ -0.49
PFDN1-207ENST00000524074 PRPF38AQ8NAV1 312 aaKnown RBP11.96□□□□□ -0.49
PFDN1-207ENST00000524074 ST13P5Q8NFI4 369 aaPredicted RBP11.96□□□□□ -0.49
PFDN1-207ENST00000524074 BSNDQ8WZ55 320 aa11.96□□□□□ -0.49
PFDN1-207ENST00000524074 SLC30A3Q99726 388 aa11.96□□□□□ -0.49
PFDN1-207ENST00000524074 EMILIN2Q9BXX0 1053 aa11.96□□□□□ -0.49
PFDN1-207ENST00000524074 EHMT1Q9H9B1 1298 aa11.96□□□□□ -0.49
PFDN1-207ENST00000524074 B2RBV5 119 aa11.95□□□□□ -0.5
PFDN1-207ENST00000524074 GPLD1P80108 840 aa11.95□□□□□ -0.5
PFDN1-207ENST00000524074 PCDH1Q08174 1060 aa11.95□□□□□ -0.5
PFDN1-207ENST00000524074 C6orf15Q6UXA7 325 aaPredicted RBP11.95□□□□□ -0.5
PFDN1-207ENST00000524074 SPATC1Q76KD6 591 aa11.95□□□□□ -0.5
PFDN1-207ENST00000524074 NUCKS1Q9H1E3 243 aaKnown RBP11.95□□□□□ -0.5
PFDN1-207ENST00000524074 PLAAQ9Y263 795 aa11.95□□□□□ -0.5
PFDN1-207ENST00000524074 J3QW42 95 aa11.94□□□□□ -0.5
PFDN1-207ENST00000524074 B3GALT4O96024 378 aa11.94□□□□□ -0.5
PFDN1-207ENST00000524074 VIL1P09327 827 aaKnown RBP11.94□□□□□ -0.5
PFDN1-207ENST00000524074 RPL6Q02878 288 aaKnown RBP11.94□□□□□ -0.5
PFDN1-207ENST00000524074 MLLT1Q03111 559 aaPredicted RBP11.94□□□□□ -0.5
PFDN1-207ENST00000524074 FERMT3Q86UX7 667 aa11.94□□□□□ -0.5
PFDN1-207ENST00000524074 FAM178BQ8IXR5 827 aa11.94□□□□□ -0.5
PFDN1-207ENST00000524074 GAL3ST3Q96A11 431 aa11.94□□□□□ -0.5
PFDN1-207ENST00000524074 CEP89Q96ST8 783 aa11.94□□□□□ -0.5
PFDN1-207ENST00000524074 ZMYM5Q9UJ78 669 aa11.94□□□□□ -0.5
PFDN1-207ENST00000524074 FAN1Q9Y2M0 1017 aa11.94□□□□□ -0.5
PFDN1-207ENST00000524074 SMNDC1O75940 238 aaKnown RBP eCLIP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms