RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 MAP3K15Q6ZN16 1313 aa20.31■□□□□ 0.84
TRAM1-205ENST00000521425 TBC1D10CQ8IV04 446 aa20.31■□□□□ 0.84
TRAM1-205ENST00000521425 CLIC6Q96NY7 704 aa20.31■□□□□ 0.84
TRAM1-205ENST00000521425 RANBP6O60518 1105 aaKnown RBP20.31■□□□□ 0.84
TRAM1-205ENST00000521425 METAP2P50579 478 aaKnown RBP eCLIP20.31■□□□□ 0.84
TRAM1-205ENST00000521425 HELLSQ9NRZ9 838 aa20.31■□□□□ 0.84
TRAM1-205ENST00000521425 CAMTA1Q9Y6Y1 1673 aa20.3■□□□□ 0.84
TRAM1-205ENST00000521425 AOPEPQ8N6M6 819 aa20.3■□□□□ 0.84
TRAM1-205ENST00000521425 SLC4A4Q9Y6R1 1079 aa20.3■□□□□ 0.84
TRAM1-205ENST00000521425 CYB5R4Q7L1T6 521 aa20.3■□□□□ 0.84
TRAM1-205ENST00000521425 FAM177A1Q8N128 213 aaPredicted RBP20.3■□□□□ 0.84
TRAM1-205ENST00000521425 ALG1Q9BT22 464 aa20.3■□□□□ 0.84
TRAM1-205ENST00000521425 CRKLP46109 303 aaKnown RBP20.29■□□□□ 0.84
TRAM1-205ENST00000521425 RESTQ13127 1097 aa20.29■□□□□ 0.84
TRAM1-205ENST00000521425 APPBP2Q92624 585 aa20.29■□□□□ 0.84
TRAM1-205ENST00000521425 PDLIM2Q96JY6 352 aa20.29■□□□□ 0.84
TRAM1-205ENST00000521425 GPR101Q96P66 508 aaPredicted RBP20.29■□□□□ 0.84
TRAM1-205ENST00000521425 ISCA1Q9BUE6 129 aa20.29■□□□□ 0.84
TRAM1-205ENST00000521425 CHD2O14647 1828 aaKnown RBP20.29■□□□□ 0.84
TRAM1-205ENST00000521425 CYP19A1P11511 503 aaPredicted RBP20.29■□□□□ 0.84
TRAM1-205ENST00000521425 PDE6AP16499 860 aa20.29■□□□□ 0.84
TRAM1-205ENST00000521425 HS1BP3Q53T59 392 aa20.29■□□□□ 0.84
TRAM1-205ENST00000521425 UBN2Q6ZU65 1347 aa20.29■□□□□ 0.84
TRAM1-205ENST00000521425 RASGRF1Q13972 1273 aa20.29■□□□□ 0.84
TRAM1-205ENST00000521425 FAM200AQ8TCP9 573 aa20.29■□□□□ 0.84
TRAM1-205ENST00000521425 NGLY1Q96IV0 654 aa20.29■□□□□ 0.84
TRAM1-205ENST00000521425 CLIP2Q9UDT6 1046 aa20.29■□□□□ 0.84
TRAM1-205ENST00000521425 CTNNA3Q9UI47 895 aa20.29■□□□□ 0.84
TRAM1-205ENST00000521425 PDE8BO95263 885 aa20.28■□□□□ 0.84
TRAM1-205ENST00000521425 PCCAP05165 728 aaPredicted RBP20.28■□□□□ 0.84
TRAM1-205ENST00000521425 COBLO75128 1261 aa20.28■□□□□ 0.84
TRAM1-205ENST00000521425 GOLGA8AA7E2F4 631 aa20.28■□□□□ 0.84
TRAM1-205ENST00000521425 FDPSP14324 419 aaKnown RBP20.28■□□□□ 0.84
TRAM1-205ENST00000521425 CYP7A1P22680 504 aa20.28■□□□□ 0.84
TRAM1-205ENST00000521425 LMOD1P29536 600 aaPredicted RBP20.28■□□□□ 0.84
TRAM1-205ENST00000521425 IGHMBP2P38935 993 aaKnown RBP20.28■□□□□ 0.84
TRAM1-205ENST00000521425 EVX2Q03828 476 aa20.28■□□□□ 0.84
TRAM1-205ENST00000521425 PFKFB2O60825 505 aa20.27■□□□□ 0.84
TRAM1-205ENST00000521425 NDUFA8P51970 172 aa20.27■□□□□ 0.84
TRAM1-205ENST00000521425 CCDC69A6NI79 296 aa20.27■□□□□ 0.84
TRAM1-205ENST00000521425 IRX5P78411 483 aaPredicted RBP20.27■□□□□ 0.84
TRAM1-205ENST00000521425 GOLGA8FQ08AF8 430 aa20.27■□□□□ 0.84
TRAM1-205ENST00000521425 GOLGA8DPQ0D2H9 430 aa20.27■□□□□ 0.84
TRAM1-205ENST00000521425 SRP68Q9UHB9 627 aaKnown RBP20.27■□□□□ 0.84
TRAM1-205ENST00000521425 PCDHA7Q9UN72 937 aa20.27■□□□□ 0.84
TRAM1-205ENST00000521425 KIF28PB7ZC32 967 aa20.26■□□□□ 0.83
TRAM1-205ENST00000521425 TRIM29Q14134 588 aa20.26■□□□□ 0.83
TRAM1-205ENST00000521425 STAMQ92783 540 aa20.26■□□□□ 0.83
TRAM1-205ENST00000521425 HMGB1P09429 215 aaKnown RBP20.26■□□□□ 0.83
TRAM1-205ENST00000521425 NAA30Q147X3 362 aaPredicted RBP20.26■□□□□ 0.83
TRAM1-205ENST00000521425 ANTXR2P58335 489 aa20.25■□□□□ 0.83
TRAM1-205ENST00000521425 LCORLQ8N3X6 602 aa20.25■□□□□ 0.83
TRAM1-205ENST00000521425 SPATA5Q8NB90 893 aa20.25■□□□□ 0.83
TRAM1-205ENST00000521425 DSCC1Q9BVC3 393 aa20.25■□□□□ 0.83
TRAM1-205ENST00000521425 RIPOR2Q9Y4F9 1068 aa20.25■□□□□ 0.83
TRAM1-205ENST00000521425 SLC12A7Q9Y666 1083 aa20.25■□□□□ 0.83
TRAM1-205ENST00000521425 LOC102724428A0A0B4J2F2 783 aa20.25■□□□□ 0.83
TRAM1-205ENST00000521425 RAD21O60216 631 aa20.25■□□□□ 0.83
TRAM1-205ENST00000521425 CDC27P30260 824 aa20.25■□□□□ 0.83
TRAM1-205ENST00000521425 SIK1P57059 783 aa20.25■□□□□ 0.83
TRAM1-205ENST00000521425 LRRFIP1Q32MZ4 808 aaKnown RBP20.25■□□□□ 0.83
TRAM1-205ENST00000521425 KDM4FA0A1W2PPD8 638 aa20.25■□□□□ 0.83
TRAM1-205ENST00000521425 PDE8AO60658 829 aa20.25■□□□□ 0.83
TRAM1-205ENST00000521425 DYNLL1P63167 89 aaKnown RBP20.25■□□□□ 0.83
TRAM1-205ENST00000521425 HMGN5P82970 282 aaKnown RBP20.25■□□□□ 0.83
TRAM1-205ENST00000521425 USPL1Q5W0Q7 1092 aa20.25■□□□□ 0.83
TRAM1-205ENST00000521425 ZNF396Q96N95 335 aaPredicted RBP20.25■□□□□ 0.83
TRAM1-205ENST00000521425 TULP1O00294 542 aaPredicted RBP20.24■□□□□ 0.83
TRAM1-205ENST00000521425 MAP3K12Q12852 859 aa20.24■□□□□ 0.83
TRAM1-205ENST00000521425 NEDD4P46934 1319 aa20.24■□□□□ 0.83
TRAM1-205ENST00000521425 SH3TC1Q8TE82 1336 aa20.24■□□□□ 0.83
TRAM1-205ENST00000521425 TPD52L1Q16890 204 aaPredicted RBP20.24■□□□□ 0.83
TRAM1-205ENST00000521425 UTP14AQ9BVJ6 771 aaKnown RBP20.24■□□□□ 0.83
TRAM1-205ENST00000521425 SLC5A1P13866 664 aa20.23■□□□□ 0.83
TRAM1-205ENST00000521425 GUCY1A2P33402 732 aa20.23■□□□□ 0.83
TRAM1-205ENST00000521425 ZNF827Q17R98 1081 aa20.23■□□□□ 0.83
TRAM1-205ENST00000521425 C3orf67Q6ZVT6 689 aa20.23■□□□□ 0.83
TRAM1-205ENST00000521425 FOXP2O15409 715 aa20.23■□□□□ 0.83
TRAM1-205ENST00000521425 ZBTB43O43298 467 aa20.23■□□□□ 0.83
TRAM1-205ENST00000521425 IARSP41252 1262 aaKnown RBP20.23■□□□□ 0.83
TRAM1-205ENST00000521425 ITPK1Q13572 414 aa20.23■□□□□ 0.83
TRAM1-205ENST00000521425 CARMIL3Q8ND23 1372 aa20.23■□□□□ 0.83
TRAM1-205ENST00000521425 ZSWIM5Q9P217 1185 aa20.23■□□□□ 0.83
TRAM1-205ENST00000521425 KLHL10Q6JEL2 608 aa20.23■□□□□ 0.83
TRAM1-205ENST00000521425 TRIM34Q9BYJ4 488 aa20.23■□□□□ 0.83
TRAM1-205ENST00000521425 CLSTN2Q9H4D0 955 aa20.23■□□□□ 0.83
TRAM1-205ENST00000521425 DDX19AQ9NUU7 478 aaKnown RBP20.22■□□□□ 0.83
TRAM1-205ENST00000521425 MARF1Q9Y4F3 1742 aaKnown RBP20.22■□□□□ 0.83
TRAM1-205ENST00000521425 GOLGA6L6A8MZA4 724 aa20.22■□□□□ 0.83
TRAM1-205ENST00000521425 EXOSC10Q01780 885 aaKnown RBP20.22■□□□□ 0.83
TRAM1-205ENST00000521425 MFSD6Q6ZSS7 791 aa20.22■□□□□ 0.83
TRAM1-205ENST00000521425 UIMC1Q96RL1 719 aa20.22■□□□□ 0.83
TRAM1-205ENST00000521425 SPTLC2O15270 562 aa20.21■□□□□ 0.83
TRAM1-205ENST00000521425 KLRK1P26718 216 aa20.21■□□□□ 0.83
TRAM1-205ENST00000521425 CPLX2Q6PUV4 134 aaKnown RBP20.21■□□□□ 0.83
TRAM1-205ENST00000521425 GRAMD1CQ8IYS0 662 aa20.21■□□□□ 0.83
TRAM1-205ENST00000521425 KCNF1Q9H3M0 494 aa20.21■□□□□ 0.83
TRAM1-205ENST00000521425 OVOS2A0A0G2JMS6 1433 aa20.21■□□□□ 0.83
TRAM1-205ENST00000521425 BTBD18B2RXH4 712 aa20.21■□□□□ 0.83
TRAM1-205ENST00000521425 NR5A1Q13285 461 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms